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The map label for this gene is bphB [H]

Identifier: 158338159

GI number: 158338159

Start: 5097295

End: 5098743

Strand: Reverse

Name: bphB [H]

Synonym: AM1_5051

Alternate gene names: 158338159

Gene position: 5098743-5097295 (Counterclockwise)

Preceding gene: 158338160

Following gene: 158339483

Centisome position: 78.4

GC content: 46.03

Gene sequence:

>1449_bases
ATGGGACAAGCCGAGCAAACGTCTAAAGCCAAAAAATCTGCAAAGGGAAAATCCATCCTGTACCTCTGGACGAACCTATC
CCTAACGCGCCAAGGAACCGTTATTTTAGCCATCCCTTTAACCTGTCTGTTAATCACGATGGCGGCCTGGATCGGCACTC
GCAAGAATGAAGATTTTACCTACCGACAGATCGTCCATACCCAAAAGGTATTGCGCACCAGCGATCAACTCTTAAACGCC
TTAATCAATGCAGAGACAGGCATTCGGGGCTATGGACTCACCGAAGACCAAAAATTTCTGGTTTCTTATCGAGAGGCATT
ACCTGAAATTGAGCCAACGCTACAGGCATTATCTCAACAGGTTCAAGAAAACCCAGAACAAAGCCAACAGATTACTGAGC
TAAAACTTTTAATCCAACAAGAACTGGATATTCTTGCTAAAACCCTGAAGCAAATTGAAAATGACTTTCGATTTGCACCC
CAGGCCCCTCGCCTCGGGGCTTTAGTGGAACAAGGGAAAGCCCGGATGGATGCAGTTCGGCAATCCTTGCAAGACTTTAA
AGATGCTGAGCAAGAAATATTAGTTAGACGTCGCACCCGTCTGAACCAAGCTAGGTTTGTCAATGATGCCCTATTGGGGG
TGTCTGGTGTAATTAGCCTGCTGGGGATTGCTGCCGCATTGTCTTTGTATCGGCAAACGGAAAAACAAATGCTGCGCCGA
GGGGATGAATTAGCTGCCACGAACCGTATTTTGGCAACGGCAAATCTCACCTTAGCCGATCGCAATAAAGAGCTAGACCA
GTTTACTTATGTGGTTTCCCATGACCTGAAAGCGCCTTTGCGAGCGATTGCCAATCTTTCTGAGTGGATTGAAGAAGATC
TCGACGAAAAACTAGACGAAGAAAACCGCTACCAGATGAACTTGCTGCGAAAACGGGTTCATCGTATGGAGGCCTTGATT
AATGGGCTGCTGCAATTTTCTCGGGTAGGTCGCCGCCAATCCACGATAGAAACGGTTAGGGTCGGAGACTTACTGGCTGA
CATCATCGATTCGTTGGCTCCCCCTGCCGAATTCAAGATTGAGATTGTGGGGCCAATGCCCACTCTAAAAACGGATACCC
TCCAATTACAGCAGGTCTTTAGCAACCTACTGAGCAATGCCATCAAACATCATCACCAATCAGAGGGGCATATTCGTATC
TCAGAGCAAAAGCAATTGGATTTTTATGAGTTTATGGTTAGTGATGATGGTCCAGGTATCGCCGAGGATTATCACGATAA
GATCTTTAAAATCTTTCAAGTCTTAGATAGTCGCGACGCAACAGAAAACACAGGGATTGGCCTATCAATTGTCAAGAAGA
TCATCGAATCTAAAGGGGGAAGTATCCAGATCGAATCTGAGGTCAATCATGGTACAACGTTCAAGTTCACTTGGCCTCAA
GAAGAGTAA

Upstream 100 bases:

>100_bases
TCTGCGCCGATGACCGAACCCAAGCTGCCGTCAGAGCCCTTCGGTCAGGCTTAGTCACTTAATAAGTTTCCAGGGAGACT
GAATCTAACGTTGCAACACT

Downstream 100 bases:

>100_bases
TTTATATCAAGAAACAAATATTCCCTTCAGGAAATCTCAAAGCCATACTTTAATTACCTAAAACCTCAAAAAACTGATCA
TTTGAATCAGATTTTGGGCC

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MGQAEQTSKAKKSAKGKSILYLWTNLSLTRQGTVILAIPLTCLLITMAAWIGTRKNEDFTYRQIVHTQKVLRTSDQLLNA
LINAETGIRGYGLTEDQKFLVSYREALPEIEPTLQALSQQVQENPEQSQQITELKLLIQQELDILAKTLKQIENDFRFAP
QAPRLGALVEQGKARMDAVRQSLQDFKDAEQEILVRRRTRLNQARFVNDALLGVSGVISLLGIAAALSLYRQTEKQMLRR
GDELAATNRILATANLTLADRNKELDQFTYVVSHDLKAPLRAIANLSEWIEEDLDEKLDEENRYQMNLLRKRVHRMEALI
NGLLQFSRVGRRQSTIETVRVGDLLADIIDSLAPPAEFKIEIVGPMPTLKTDTLQLQQVFSNLLSNAIKHHHQSEGHIRI
SEQKQLDFYEFMVSDDGPGIAEDYHDKIFKIFQVLDSRDATENTGIGLSIVKKIIESKGGSIQIESEVNHGTTFKFTWPQ
EE

Sequences:

>Translated_482_residues
MGQAEQTSKAKKSAKGKSILYLWTNLSLTRQGTVILAIPLTCLLITMAAWIGTRKNEDFTYRQIVHTQKVLRTSDQLLNA
LINAETGIRGYGLTEDQKFLVSYREALPEIEPTLQALSQQVQENPEQSQQITELKLLIQQELDILAKTLKQIENDFRFAP
QAPRLGALVEQGKARMDAVRQSLQDFKDAEQEILVRRRTRLNQARFVNDALLGVSGVISLLGIAAALSLYRQTEKQMLRR
GDELAATNRILATANLTLADRNKELDQFTYVVSHDLKAPLRAIANLSEWIEEDLDEKLDEENRYQMNLLRKRVHRMEALI
NGLLQFSRVGRRQSTIETVRVGDLLADIIDSLAPPAEFKIEIVGPMPTLKTDTLQLQQVFSNLLSNAIKHHHQSEGHIRI
SEQKQLDFYEFMVSDDGPGIAEDYHDKIFKIFQVLDSRDATENTGIGLSIVKKIIESKGGSIQIESEVNHGTTFKFTWPQ
EE
>Mature_481_residues
GQAEQTSKAKKSAKGKSILYLWTNLSLTRQGTVILAIPLTCLLITMAAWIGTRKNEDFTYRQIVHTQKVLRTSDQLLNAL
INAETGIRGYGLTEDQKFLVSYREALPEIEPTLQALSQQVQENPEQSQQITELKLLIQQELDILAKTLKQIENDFRFAPQ
APRLGALVEQGKARMDAVRQSLQDFKDAEQEILVRRRTRLNQARFVNDALLGVSGVISLLGIAAALSLYRQTEKQMLRRG
DELAATNRILATANLTLADRNKELDQFTYVVSHDLKAPLRAIANLSEWIEEDLDEKLDEENRYQMNLLRKRVHRMEALIN
GLLQFSRVGRRQSTIETVRVGDLLADIIDSLAPPAEFKIEIVGPMPTLKTDTLQLQQVFSNLLSNAIKHHHQSEGHIRIS
EQKQLDFYEFMVSDDGPGIAEDYHDKIFKIFQVLDSRDATENTGIGLSIVKKIIESKGGSIQIESEVNHGTTFKFTWPQE
E

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=221, Percent_Identity=30.7692307692308, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787894, Length=244, Percent_Identity=27.4590163934426, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786912, Length=217, Percent_Identity=27.1889400921659, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789149, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786600, Length=222, Percent_Identity=30.1801801801802, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789808, Length=212, Percent_Identity=25, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1790436, Length=220, Percent_Identity=26.3636363636364, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790861, Length=206, Percent_Identity=28.6407766990291, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=224, Percent_Identity=29.4642857142857, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=25.1101321585903, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790346, Length=203, Percent_Identity=26.1083743842365, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788713, Length=229, Percent_Identity=25.764192139738, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54629; Mature: 54498

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQAEQTSKAKKSAKGKSILYLWTNLSLTRQGTVILAIPLTCLLITMAAWIGTRKNEDFT
CCCCHHHHHHHHHCCCCEEEEEEECCEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCHH
YRQIVHTQKVLRTSDQLLNALINAETGIRGYGLTEDQKFLVSYREALPEIEPTLQALSQQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
VQENPEQSQQITELKLLIQQELDILAKTLKQIENDFRFAPQAPRLGALVEQGKARMDAVR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QSLQDFKDAEQEILVRRRTRLNQARFVNDALLGVSGVISLLGIAAALSLYRQTEKQMLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDELAATNRILATANLTLADRNKELDQFTYVVSHDLKAPLRAIANLSEWIEEDLDEKLDE
CCHHHHHCCEEEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENRYQMNLLRKRVHRMEALINGLLQFSRVGRRQSTIETVRVGDLLADIIDSLAPPAEFKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
EIVGPMPTLKTDTLQLQQVFSNLLSNAIKHHHQSEGHIRISEQKQLDFYEFMVSDDGPGI
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHEECCCCCCC
AEDYHDKIFKIFQVLDSRDATENTGIGLSIVKKIIESKGGSIQIESEVNHGTTFKFTWPQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCC
EE
CC
>Mature Secondary Structure 
GQAEQTSKAKKSAKGKSILYLWTNLSLTRQGTVILAIPLTCLLITMAAWIGTRKNEDFT
CCCHHHHHHHHHCCCCEEEEEEECCEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCHH
YRQIVHTQKVLRTSDQLLNALINAETGIRGYGLTEDQKFLVSYREALPEIEPTLQALSQQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
VQENPEQSQQITELKLLIQQELDILAKTLKQIENDFRFAPQAPRLGALVEQGKARMDAVR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QSLQDFKDAEQEILVRRRTRLNQARFVNDALLGVSGVISLLGIAAALSLYRQTEKQMLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDELAATNRILATANLTLADRNKELDQFTYVVSHDLKAPLRAIANLSEWIEEDLDEKLDE
CCHHHHHCCEEEEECEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENRYQMNLLRKRVHRMEALINGLLQFSRVGRRQSTIETVRVGDLLADIIDSLAPPAEFKI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
EIVGPMPTLKTDTLQLQQVFSNLLSNAIKHHHQSEGHIRISEQKQLDFYEFMVSDDGPGI
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHEECCCCCCC
AEDYHDKIFKIFQVLDSRDATENTGIGLSIVKKIIESKGGSIQIESEVNHGTTFKFTWPQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEECCC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]