Click here to switch to the map view.

The map label for this gene is 158338144

Identifier: 158338144

GI number: 158338144

Start: 5084760

End: 5085368

Strand: Direct

Name: 158338144

Synonym: AM1_5036

Alternate gene names: NA

Gene position: 5084760-5085368 (Clockwise)

Preceding gene: 158338142

Following gene: 158338145

Centisome position: 78.18

GC content: 45.65

Gene sequence:

>609_bases
ATGGCACGCCCACCAAAAATCTCGAATGAAAATATTCTGGCGATAGCACGAGAGATCTTCCTGGAACAGGGGGTGGGGGC
TTCAACCCTTGATATTGCTGAGCAGGTTGGAATTTCTGAAGCCTCCATCTTCAAGCGGTTCAAAACAAAGCAAACTTTAT
TTGCTGCAGCCATGGGCATTTTGGAGCAACCGCCATGGTTGTCTGTACTCGCAGATTATGAGCCCACAGCCAATGTCAAA
TCGGAACTTACCGATATTTGTGAGCAAATGTTGGCGTTCTATCAGGATCTAATGCCACGGGTTTTGATGGTAATGGCTCA
AGGTAAAGTATCCGCTCCACTACCGATAGTGCCACCACCCATCCGAGATCGAAAGCTCTTAGTTGGCTTTCTTGATCGAG
CAGTGCAAGCAGGCCATCTCCGAACCTGTGATACGCAGACTGTCGCACAGATGATTATTGGAACCATCATCAATACTGTT
GTTACTCAGCATATGATCCACAAATTATCTATCCAGCCATCCATGCCAAATTTTGTATTTCCGCCTTCAGAAACGCTTAT
CAAAAATTTGATTGAGACGTTGTGGATGGGGATTGCACCTGATTCATAA

Upstream 100 bases:

>100_bases
ATGGTGTCGATCATAAATCACTTTCTGATGATGCACTGATTCTTTTGACATAATTAGCTTCTCAAAGCTATATTAGTAAG
TACTTACTCACTTTAGAAAA

Downstream 100 bases:

>100_bases
ATTTTTTATTCAATTCGTAAGTAAGTACTTACATTTTATCGCTTGAATATCTTGGAGGCCAACAGTGGTTTCGAGTCAAA
TACCTACGCAAGAGCCCCGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MARPPKISNENILAIAREIFLEQGVGASTLDIAEQVGISEASIFKRFKTKQTLFAAAMGILEQPPWLSVLADYEPTANVK
SELTDICEQMLAFYQDLMPRVLMVMAQGKVSAPLPIVPPPIRDRKLLVGFLDRAVQAGHLRTCDTQTVAQMIIGTIINTV
VTQHMIHKLSIQPSMPNFVFPPSETLIKNLIETLWMGIAPDS

Sequences:

>Translated_202_residues
MARPPKISNENILAIAREIFLEQGVGASTLDIAEQVGISEASIFKRFKTKQTLFAAAMGILEQPPWLSVLADYEPTANVK
SELTDICEQMLAFYQDLMPRVLMVMAQGKVSAPLPIVPPPIRDRKLLVGFLDRAVQAGHLRTCDTQTVAQMIIGTIINTV
VTQHMIHKLSIQPSMPNFVFPPSETLIKNLIETLWMGIAPDS
>Mature_201_residues
ARPPKISNENILAIAREIFLEQGVGASTLDIAEQVGISEASIFKRFKTKQTLFAAAMGILEQPPWLSVLADYEPTANVKS
ELTDICEQMLAFYQDLMPRVLMVMAQGKVSAPLPIVPPPIRDRKLLVGFLDRAVQAGHLRTCDTQTVAQMIIGTIINTVV
TQHMIHKLSIQPSMPNFVFPPSETLIKNLIETLWMGIAPDS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22324; Mature: 22192

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPPKISNENILAIAREIFLEQGVGASTLDIAEQVGISEASIFKRFKTKQTLFAAAMGI
CCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LEQPPWLSVLADYEPTANVKSELTDICEQMLAFYQDLMPRVLMVMAQGKVSAPLPIVPPP
HCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IRDRKLLVGFLDRAVQAGHLRTCDTQTVAQMIIGTIINTVVTQHMIHKLSIQPSMPNFVF
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPSETLIKNLIETLWMGIAPDS
CCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ARPPKISNENILAIAREIFLEQGVGASTLDIAEQVGISEASIFKRFKTKQTLFAAAMGI
CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LEQPPWLSVLADYEPTANVKSELTDICEQMLAFYQDLMPRVLMVMAQGKVSAPLPIVPPP
HCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IRDRKLLVGFLDRAVQAGHLRTCDTQTVAQMIIGTIINTVVTQHMIHKLSIQPSMPNFVF
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PPSETLIKNLIETLWMGIAPDS
CCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA