Click here to switch to the map view.

The map label for this gene is 158338115

Identifier: 158338115

GI number: 158338115

Start: 5053378

End: 5053560

Strand: Reverse

Name: 158338115

Synonym: AM1_5005

Alternate gene names: NA

Gene position: 5053560-5053378 (Counterclockwise)

Preceding gene: 158338119

Following gene: 158338114

Centisome position: 77.7

GC content: 48.09

Gene sequence:

>183_bases
ATGAGTATTGAAGATAGAATTGACGCCACGGTCAAAAACCTTGAGGGGAAAGGCCAGGAAATGATGGGAGAACTCACCGG
CAACCCTCAAGATCGCGAAGAAGGTCGAGCCAAGCAGGCTGAAGCCGAGACTCAACATGCCGTTGAGAATATTAAGGATG
ACATTAAGCAAGCCATTGACTAG

Upstream 100 bases:

>100_bases
GATAGACCCATCAAACTATCTTGCGGTAGAGCCTGGACCAGTGGACCGATTGATAGATTATTGATGTCGCCAAAACTACT
GACAATAAAGGAGTTTAGCC

Downstream 100 bases:

>100_bases
CCATGGTGGATAACCATTTTCACGCCTGTGTCTCTGGATGCTAGGTAGTCTCAGGCTACCTAGCCTTTTTATATCCCTAT
CTGAATTTCTCCCCCCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MSIEDRIDATVKNLEGKGQEMMGELTGNPQDREEGRAKQAEAETQHAVENIKDDIKQAID

Sequences:

>Translated_60_residues
MSIEDRIDATVKNLEGKGQEMMGELTGNPQDREEGRAKQAEAETQHAVENIKDDIKQAID
>Mature_59_residues
SIEDRIDATVKNLEGKGQEMMGELTGNPQDREEGRAKQAEAETQHAVENIKDDIKQAID

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 6683; Mature: 6552

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEDRIDATVKNLEGKGQEMMGELTGNPQDREEGRAKQAEAETQHAVENIKDDIKQAID
CCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIEDRIDATVKNLEGKGQEMMGELTGNPQDREEGRAKQAEAETQHAVENIKDDIKQAID
CCHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]