| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338097
Identifier: 158338097
GI number: 158338097
Start: 5033573
End: 5034820
Strand: Reverse
Name: 158338097
Synonym: AM1_4987
Alternate gene names: NA
Gene position: 5034820-5033573 (Counterclockwise)
Preceding gene: 158338104
Following gene: 158338095
Centisome position: 77.41
GC content: 48.88
Gene sequence:
>1248_bases ATGGCTATCAAGCCCGTGCATAAAAGGCAAATCGACCGTCCATCGATAGCAGGATTTACCCTAACGGAGTTGTTGGTGGG GGGTGTCATCAGCTTTTTTCTCATCACCCTAAGTGGCTATGGTTTGGTCTCCATCATCACCACCAGCACCACCACCAACG CTCAAAACGAACGTCGCGTAGAACTGAATCGAGCTGGAGACTTTATAGCCCAGGAAATCAGAACAGCCGCCACAATTGTC CAGGATGCCTCTATCAGTTCTGAACAACCCATCGAATTCTTGTCAGGTATCAGCCCAGACATATCCCAAGTTCAGCCCGT CCTGATGCTAAGAATGGCTCAGACCAACCTCATCCCCATCGTCTACTATCTCGCTACACCCCCTAACGGTATTTGGCAGG GTCCTAAAGCAATCTATCGGTGGGGGCCTGCCTATGACGATCAGGGGACCTATATCAATCCTGATGCCCCAACCCAATGG CCCCATGAGCCCCTCATTGATCTGATTGAAAGTGAAGGCTCCCTGCCCACCTGTGAAACCAACTGGGTCGGTTCGGGCAC CCCTGGATTCTATGTCTGCGTTAATGCCACGGGCGACATCGCCAAAGTCTATCAAACCGGCAGAATTAACAAAGTCTTGG CGCAAACGGATACTTACCGATATAGCTCCACAACCGCTATCCGTGCCCTAGAATTTGCCCAGACTTCTGGAACTTCATTG GGGACAACCAATTCAACTGCATGTCTTCTAGTCATGGATGAAGACAGCATAGACAGCGATATCCCCACCATTCAAGACGC TGCCCAAAACAAAGGCATTAGCGTGAATGCCTTGATTAATAAAAATAACCCGACCCAGCTAGGGAATCCTACTTTTCTCT GGAATACCAGCTATACCGGAGACATCGTGACTATCCCCACTGGGCAAACAGGCGATGAAGGTGTCTTTTCTCTGCCCCAG ACCTTGAATGGTCAAAACGGCCCCTTATCCCTCAATGATTTTTTAGCTGGGAATCTGCCTCAAACCAATCTCGATGAAGT CCTGAACATTCAGCCCTTAGGCAATGCTCAACTCAATGATTTAGTGGGACAATCCTGTACTGCAATTGTCTATGACAGTG ATATCTCCATTAACGTTGATCCACTGCAAGCAAATTTACAAGGTGCCCGCCTTGGACGGTTTAATTTCACAGTTCAGGCC GTTGTCCCCAGTTCTGAGCTGAGTAAACTCACGATACGTGTTGATTAG
Upstream 100 bases:
>100_bases AAAAAAATAAATCTAGCTATTCTAAAAAAGCTAAAAAAATCAGCAACAACGATTCGCTCTTTAATAAATCTACTTTTATA CTCTCTTGGCATAATATTTT
Downstream 100 bases:
>100_bases ACCCTCTCGAAGGTGGGAACCAAAGAAAGGACTAAATGGGCTCAAATCACCCCAATCTGGGCTGTTTAGCTAGAAGAAAA TATTCCACATCCTGCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MAIKPVHKRQIDRPSIAGFTLTELLVGGVISFFLITLSGYGLVSIITTSTTTNAQNERRVELNRAGDFIAQEIRTAATIV QDASISSEQPIEFLSGISPDISQVQPVLMLRMAQTNLIPIVYYLATPPNGIWQGPKAIYRWGPAYDDQGTYINPDAPTQW PHEPLIDLIESEGSLPTCETNWVGSGTPGFYVCVNATGDIAKVYQTGRINKVLAQTDTYRYSSTTAIRALEFAQTSGTSL GTTNSTACLLVMDEDSIDSDIPTIQDAAQNKGISVNALINKNNPTQLGNPTFLWNTSYTGDIVTIPTGQTGDEGVFSLPQ TLNGQNGPLSLNDFLAGNLPQTNLDEVLNIQPLGNAQLNDLVGQSCTAIVYDSDISINVDPLQANLQGARLGRFNFTVQA VVPSSELSKLTIRVD
Sequences:
>Translated_415_residues MAIKPVHKRQIDRPSIAGFTLTELLVGGVISFFLITLSGYGLVSIITTSTTTNAQNERRVELNRAGDFIAQEIRTAATIV QDASISSEQPIEFLSGISPDISQVQPVLMLRMAQTNLIPIVYYLATPPNGIWQGPKAIYRWGPAYDDQGTYINPDAPTQW PHEPLIDLIESEGSLPTCETNWVGSGTPGFYVCVNATGDIAKVYQTGRINKVLAQTDTYRYSSTTAIRALEFAQTSGTSL GTTNSTACLLVMDEDSIDSDIPTIQDAAQNKGISVNALINKNNPTQLGNPTFLWNTSYTGDIVTIPTGQTGDEGVFSLPQ TLNGQNGPLSLNDFLAGNLPQTNLDEVLNIQPLGNAQLNDLVGQSCTAIVYDSDISINVDPLQANLQGARLGRFNFTVQA VVPSSELSKLTIRVD >Mature_414_residues AIKPVHKRQIDRPSIAGFTLTELLVGGVISFFLITLSGYGLVSIITTSTTTNAQNERRVELNRAGDFIAQEIRTAATIVQ DASISSEQPIEFLSGISPDISQVQPVLMLRMAQTNLIPIVYYLATPPNGIWQGPKAIYRWGPAYDDQGTYINPDAPTQWP HEPLIDLIESEGSLPTCETNWVGSGTPGFYVCVNATGDIAKVYQTGRINKVLAQTDTYRYSSTTAIRALEFAQTSGTSLG TTNSTACLLVMDEDSIDSDIPTIQDAAQNKGISVNALINKNNPTQLGNPTFLWNTSYTGDIVTIPTGQTGDEGVFSLPQT LNGQNGPLSLNDFLAGNLPQTNLDEVLNIQPLGNAQLNDLVGQSCTAIVYDSDISINVDPLQANLQGARLGRFNFTVQAV VPSSELSKLTIRVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44772; Mature: 44641
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKPVHKRQIDRPSIAGFTLTELLVGGVISFFLITLSGYGLVSIITTSTTTNAQNERRV CCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEE ELNRAGDFIAQEIRTAATIVQDASISSEQPIEFLSGISPDISQVQPVLMLRMAQTNLIPI EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE VYYLATPPNGIWQGPKAIYRWGPAYDDQGTYINPDAPTQWPHEPLIDLIESEGSLPTCET EEEEECCCCCCCCCCHHHEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCC NWVGSGTPGFYVCVNATGDIAKVYQTGRINKVLAQTDTYRYSSTTAIRALEFAQTSGTSL CCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEECCCCCEEECCCHHHHEEEHHHCCCCCC GTTNSTACLLVMDEDSIDSDIPTIQDAAQNKGISVNALINKNNPTQLGNPTFLWNTSYTG CCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCEEEECCCCCC DIVTIPTGQTGDEGVFSLPQTLNGQNGPLSLNDFLAGNLPQTNLDEVLNIQPLGNAQLND CEEECCCCCCCCCCEEECHHHCCCCCCCEEHHHHHCCCCCCCCHHHHEEECCCCCCHHHH LVGQSCTAIVYDSDISINVDPLQANLQGARLGRFNFTVQAVVPSSELSKLTIRVD HHCCCEEEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEC >Mature Secondary Structure AIKPVHKRQIDRPSIAGFTLTELLVGGVISFFLITLSGYGLVSIITTSTTTNAQNERRV CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEE ELNRAGDFIAQEIRTAATIVQDASISSEQPIEFLSGISPDISQVQPVLMLRMAQTNLIPI EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE VYYLATPPNGIWQGPKAIYRWGPAYDDQGTYINPDAPTQWPHEPLIDLIESEGSLPTCET EEEEECCCCCCCCCCHHHEECCCCCCCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCC NWVGSGTPGFYVCVNATGDIAKVYQTGRINKVLAQTDTYRYSSTTAIRALEFAQTSGTSL CCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEECCCCCEEECCCHHHHEEEHHHCCCCCC GTTNSTACLLVMDEDSIDSDIPTIQDAAQNKGISVNALINKNNPTQLGNPTFLWNTSYTG CCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEEEECCCCCCCCCCEEEECCCCCC DIVTIPTGQTGDEGVFSLPQTLNGQNGPLSLNDFLAGNLPQTNLDEVLNIQPLGNAQLND CEEECCCCCCCCCCEEECHHHCCCCCCCEEHHHHHCCCCCCCCHHHHEEECCCCCCHHHH LVGQSCTAIVYDSDISINVDPLQANLQGARLGRFNFTVQAVVPSSELSKLTIRVD HHCCCEEEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA