| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is hslO
Identifier: 158338084
GI number: 158338084
Start: 5017860
End: 5018759
Strand: Direct
Name: hslO
Synonym: AM1_4974
Alternate gene names: 158338084
Gene position: 5017860-5018759 (Clockwise)
Preceding gene: 158338081
Following gene: 158338086
Centisome position: 77.15
GC content: 50.0
Gene sequence:
>900_bases ATGGCCGACCAACTTATTCGAGCCACAGCTGCTGATGATGGCATCCGAGCAGTTGGTGTGATCACCACTCGTTTAACCGA AGATGCAAGACAACGTCATGGCCTCTCCTATGTCGCAACTGCTGCTTTAGGCCGGACTATGTCTGCTGGATTATTGTTGG CGTCCAGCATGAAACAAGCAGAAGCAAGGATTAATCTCCGTATTCGTGGGGATGGGCCATTGCAAGGCATTTTAGTGGAT GCTGGCTTAGACGGTACGGTCCGCGGATATGTCACCAATCCTGGGGTAGAACTCCCCCCCAATGCGAAGGGCAAGCTGGA TGTGGGAGGGGCTGTCGGTAAAGGTTTTCTCTATGTGATACGGGATATGGGATATGGATACCCCTATTCCAGCACGGTGG AATTAGTCTCCGGTGAGATAGGCGAAGATGTTACTCACTATCTGGTCACTTCAGAGCAAACCCCATCTGCTCTTGCTTTG GGGGTTTTTGTCGGGGCTCAAGGAGTCACTGCGTCTGGGGGACTGTTGATCCAAGTTTTACCAAAAGCAGCTGAAGATCC GGCCCTTGTGGAATTACTAGAGTCTCGCCTTGCTCACTTGCAAGGCTTTACTCCCTTACTGCAAGCTGGCAAAACGCTTC CTGATATCTTTACGGACTTGCTAGGGGATATGGGACTTAAGATATTTCCCCAAACTCAAATGGTGCAATTCCAGTGCCGC TGCTCAACTGAGCGAGTGCTCGGGGCCTTGAAAATGCTCGGGCAAGATGAACTGCTAGACATGATTGAAAAGGATGATGG GGCAGAAGCAACTTGTGATTTTTGTGGTGAGGTCTATCAGGTTACCAGCGATCAGCTAGGAAAACTGATTGATGATTTAA AAACCGAAGCAGGGGCCTAG
Upstream 100 bases:
>100_bases CTTGGCAACATAACGCTCTAATGTATCTACTTTCCAAGGCTTCACTTGAAGTTCATTGCAGTACAATTAAAAAGATTTAT TAAGAACCTGTAGGGATTCT
Downstream 100 bases:
>100_bases TTCTAGACCCCTGTCTTATTTCAAGCTAGAGACAGAGTAGAATCCCGTCTCTGTTCTCTAGATTTGAATGCTGCCCCCAT CATAGAGGGGAACGGTCATT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MADQLIRATAADDGIRAVGVITTRLTEDARQRHGLSYVATAALGRTMSAGLLLASSMKQAEARINLRIRGDGPLQGILVD AGLDGTVRGYVTNPGVELPPNAKGKLDVGGAVGKGFLYVIRDMGYGYPYSSTVELVSGEIGEDVTHYLVTSEQTPSALAL GVFVGAQGVTASGGLLIQVLPKAAEDPALVELLESRLAHLQGFTPLLQAGKTLPDIFTDLLGDMGLKIFPQTQMVQFQCR CSTERVLGALKMLGQDELLDMIEKDDGAEATCDFCGEVYQVTSDQLGKLIDDLKTEAGA
Sequences:
>Translated_299_residues MADQLIRATAADDGIRAVGVITTRLTEDARQRHGLSYVATAALGRTMSAGLLLASSMKQAEARINLRIRGDGPLQGILVD AGLDGTVRGYVTNPGVELPPNAKGKLDVGGAVGKGFLYVIRDMGYGYPYSSTVELVSGEIGEDVTHYLVTSEQTPSALAL GVFVGAQGVTASGGLLIQVLPKAAEDPALVELLESRLAHLQGFTPLLQAGKTLPDIFTDLLGDMGLKIFPQTQMVQFQCR CSTERVLGALKMLGQDELLDMIEKDDGAEATCDFCGEVYQVTSDQLGKLIDDLKTEAGA >Mature_298_residues ADQLIRATAADDGIRAVGVITTRLTEDARQRHGLSYVATAALGRTMSAGLLLASSMKQAEARINLRIRGDGPLQGILVDA GLDGTVRGYVTNPGVELPPNAKGKLDVGGAVGKGFLYVIRDMGYGYPYSSTVELVSGEIGEDVTHYLVTSEQTPSALALG VFVGAQGVTASGGLLIQVLPKAAEDPALVELLESRLAHLQGFTPLLQAGKTLPDIFTDLLGDMGLKIFPQTQMVQFQCRC STERVLGALKMLGQDELLDMIEKDDGAEATCDFCGEVYQVTSDQLGKLIDDLKTEAGA
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
GO:0005737: 33 kDa chaperonin
GO:0006457: 33 kDa chaperonin
GO:0051082: 33 kDa chaperonin
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=283, Percent_Identity=26.1484098939929, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_ACAM1 (B0C4Q9)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001519260.1 - ProteinModelPortal: B0C4Q9 - SMR: B0C4Q9 - GeneID: 5683773 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_4974 - HOGENOM: HBG286231 - OMA: VMLGRAM - ProtClustDB: PRK00114 - BioCyc: AMAR329726:AM1_4974-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 31602; Mature: 31470
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQLIRATAADDGIRAVGVITTRLTEDARQRHGLSYVATAALGRTMSAGLLLASSMKQA CCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC EARINLRIRGDGPLQGILVDAGLDGTVRGYVTNPGVELPPNAKGKLDVGGAVGKGFLYVI CEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHH RDMGYGYPYSSTVELVSGEIGEDVTHYLVTSEQTPSALALGVFVGAQGVTASGGLLIQVL HHHCCCCCCCCHHHHHCCHHCCHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEC PKAAEDPALVELLESRLAHLQGFTPLLQAGKTLPDIFTDLLGDMGLKIFPQTQMVQFQCR CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCEEECCCCEEEEEEC CSTERVLGALKMLGQDELLDMIEKDDGAEATCDFCGEVYQVTSDQLGKLIDDLKTEAGA CCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADQLIRATAADDGIRAVGVITTRLTEDARQRHGLSYVATAALGRTMSAGLLLASSMKQA CCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC EARINLRIRGDGPLQGILVDAGLDGTVRGYVTNPGVELPPNAKGKLDVGGAVGKGFLYVI CEEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHH RDMGYGYPYSSTVELVSGEIGEDVTHYLVTSEQTPSALALGVFVGAQGVTASGGLLIQVL HHHCCCCCCCCHHHHHCCHHCCHHHHHEEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEC PKAAEDPALVELLESRLAHLQGFTPLLQAGKTLPDIFTDLLGDMGLKIFPQTQMVQFQCR CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHCCCEEECCCCEEEEEEC CSTERVLGALKMLGQDELLDMIEKDDGAEATCDFCGEVYQVTSDQLGKLIDDLKTEAGA CCHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA