| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338080
Identifier: 158338080
GI number: 158338080
Start: 5007424
End: 5008065
Strand: Direct
Name: 158338080
Synonym: AM1_4967
Alternate gene names: NA
Gene position: 5007424-5008065 (Clockwise)
Preceding gene: 158338079
Following gene: 158338081
Centisome position: 76.99
GC content: 38.63
Gene sequence:
>642_bases ATGAGTGGTCCTCAAGATACTTCACTTACATCACATGGTTCCGGTGATGGTGGTACTTCAAAAGATTTACTTGATCGAGT AGTTTCTACTTCTATCTTACTGAAGTTTCTCGAGATTTTTGAAGGTGCAGAACTTAAGTTGTCGCAAATTATAGATATTT CCAATGGGGTCATTGATTTTGTTACTGGGCATGTTGTGACTCAAAACTATGCTACCAAGACAGATAAGGCAAGCGGCTCT AAAACTGTTGTTTCCCGACAAGTTCAGATCCAGACAGCACATGAAGGAAACTTTACTTTAACAACCAATGAATCTGTAAA GTTAAGTGATTCTGCCATCAAGAGCTTAAGAGATACAAATAACACCTACTTATTCAATAAAACAGATGATATTTATGTTA ACGATAAAAGTCTTGAGTTTGCTCAAGATTTGCTACAAGAGGCATCAAGATATGGCCAACAAGTCACTTGCGTTTATGAT CAATCCAATGGAGATATTCTTTTAGTTCGAATAATTTCAAATCCAACATCTATTTCAAATGACAATAGATCATTCCCTTA TATTCTCTCAGCCAGTGGCCCCGGAGTTCCTTCCCCAACACCCCAACCAACCCCTCATCCAACACCTCATCCGCGCCGAT AA
Upstream 100 bases:
>100_bases ATAAAGATGGCAATAGGAAGGATAAAAGATGTTGTAGGTTCTTCAAAAGAGATTTTATTTTTGTATAACAGAAAAAAAGA AATTCTAGTAAGGAGACATT
Downstream 100 bases:
>100_bases GAAGACATAATTTAACTAGAGCTTGCTGAAAGATTAAAAAGTGCTAACTAGCTTGTAAGGAAAATATTTTTACAAAGCCA ATTAACGATTTTTTCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MSGPQDTSLTSHGSGDGGTSKDLLDRVVSTSILLKFLEIFEGAELKLSQIIDISNGVIDFVTGHVVTQNYATKTDKASGS KTVVSRQVQIQTAHEGNFTLTTNESVKLSDSAIKSLRDTNNTYLFNKTDDIYVNDKSLEFAQDLLQEASRYGQQVTCVYD QSNGDILLVRIISNPTSISNDNRSFPYILSASGPGVPSPTPQPTPHPTPHPRR
Sequences:
>Translated_213_residues MSGPQDTSLTSHGSGDGGTSKDLLDRVVSTSILLKFLEIFEGAELKLSQIIDISNGVIDFVTGHVVTQNYATKTDKASGS KTVVSRQVQIQTAHEGNFTLTTNESVKLSDSAIKSLRDTNNTYLFNKTDDIYVNDKSLEFAQDLLQEASRYGQQVTCVYD QSNGDILLVRIISNPTSISNDNRSFPYILSASGPGVPSPTPQPTPHPTPHPRR >Mature_212_residues SGPQDTSLTSHGSGDGGTSKDLLDRVVSTSILLKFLEIFEGAELKLSQIIDISNGVIDFVTGHVVTQNYATKTDKASGSK TVVSRQVQIQTAHEGNFTLTTNESVKLSDSAIKSLRDTNNTYLFNKTDDIYVNDKSLEFAQDLLQEASRYGQQVTCVYDQ SNGDILLVRIISNPTSISNDNRSFPYILSASGPGVPSPTPQPTPHPTPHPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23159; Mature: 23028
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPQDTSLTSHGSGDGGTSKDLLDRVVSTSILLKFLEIFEGAELKLSQIIDISNGVIDF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHEEECCCCEEEH VTGHVVTQNYATKTDKASGSKTVVSRQVQIQTAHEGNFTLTTNESVKLSDSAIKSLRDTN HCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCEEECHHHHHHHHCCC NTYLFNKTDDIYVNDKSLEFAQDLLQEASRYGQQVTCVYDQSNGDILLVRIISNPTSISN CEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCC DNRSFPYILSASGPGVPSPTPQPTPHPTPHPRR CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGPQDTSLTSHGSGDGGTSKDLLDRVVSTSILLKFLEIFEGAELKLSQIIDISNGVIDF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHEEECCCCEEEH VTGHVVTQNYATKTDKASGSKTVVSRQVQIQTAHEGNFTLTTNESVKLSDSAIKSLRDTN HCCEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEECCCCEEECHHHHHHHHCCC NTYLFNKTDDIYVNDKSLEFAQDLLQEASRYGQQVTCVYDQSNGDILLVRIISNPTSISN CEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCC DNRSFPYILSASGPGVPSPTPQPTPHPTPHPRR CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA