| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338062
Identifier: 158338062
GI number: 158338062
Start: 4987059
End: 4987622
Strand: Direct
Name: 158338062
Synonym: AM1_4949
Alternate gene names: NA
Gene position: 4987059-4987622 (Clockwise)
Preceding gene: 158338061
Following gene: 158338066
Centisome position: 76.68
GC content: 43.09
Gene sequence:
>564_bases TTGAGTGCAATTGATCAACTGGAGAAAGAATTAGAGGATCTGCGAAGTCGGTTTAGTCAAGCTTTTCAGGTGTTGGATGG CTTTTCTCAACTGCAAACTCATTTTGAGCAACTCACTCAAACCCAGCAAGAGTTAGAACAATCTTTAAGCCAAGCTAAAA ACTCTTTAGAGGACGCTTCTGCCCCCTCAGAACTACAAGAGCAATATACTGAGCTAGAGTCGCAATTCGAAGCTAAATAT GCCCAATTACAATCAGATATTTTAGATTTAAGGCATAGTTTTGAAGCTACAACCTATGATCTCCAAGAGCAGCTTCACCA CGATCGCAGTCAACTTAAGCAATTAGAACAAACAGCAGCTCCTGCTCCTGGTGCAGATACCAACAAGCTGGACTGGCTAG AGAATTCTATGCAAGACTTGAGCAATTTAATTTATGCCGACCGCTCTGCTTTGCAACATTTGGATCGACGCCTCAACCAC GTCAAACGAGTCACCGACATCATCACGATTGTGGGTGCGAGTGGCTTTTTTGTGATGACGATTATTATGGTGGTGACTCG TTAG
Upstream 100 bases:
>100_bases ATGAACATTACCCCTTAAAGTCAAAGCTTGACGACTTAAATATTAGGTTTGCAATGCCTGGAAGAAAAAAACAAGTTTAT AGCCTTTGAGGAGACGGGTT
Downstream 100 bases:
>100_bases TCTGGGCGTTATCGAAGGATTATCTAACCCCCACCACTTCGGCAGAAGCACTCTTAATCGAGAAGATTTTTTCCACGATA TCAGACACCACTTTGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSAIDQLEKELEDLRSRFSQAFQVLDGFSQLQTHFEQLTQTQQELEQSLSQAKNSLEDASAPSELQEQYTELESQFEAKY AQLQSDILDLRHSFEATTYDLQEQLHHDRSQLKQLEQTAAPAPGADTNKLDWLENSMQDLSNLIYADRSALQHLDRRLNH VKRVTDIITIVGASGFFVMTIIMVVTR
Sequences:
>Translated_187_residues MSAIDQLEKELEDLRSRFSQAFQVLDGFSQLQTHFEQLTQTQQELEQSLSQAKNSLEDASAPSELQEQYTELESQFEAKY AQLQSDILDLRHSFEATTYDLQEQLHHDRSQLKQLEQTAAPAPGADTNKLDWLENSMQDLSNLIYADRSALQHLDRRLNH VKRVTDIITIVGASGFFVMTIIMVVTR >Mature_186_residues SAIDQLEKELEDLRSRFSQAFQVLDGFSQLQTHFEQLTQTQQELEQSLSQAKNSLEDASAPSELQEQYTELESQFEAKYA QLQSDILDLRHSFEATTYDLQEQLHHDRSQLKQLEQTAAPAPGADTNKLDWLENSMQDLSNLIYADRSALQHLDRRLNHV KRVTDIITIVGASGFFVMTIIMVVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21459; Mature: 21328
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIDQLEKELEDLRSRFSQAFQVLDGFSQLQTHFEQLTQTQQELEQSLSQAKNSLEDAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APSELQEQYTELESQFEAKYAQLQSDILDLRHSFEATTYDLQEQLHHDRSQLKQLEQTAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPGADTNKLDWLENSMQDLSNLIYADRSALQHLDRRLNHVKRVTDIITIVGASGFFVMT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IIMVVTR HHHHHCC >Mature Secondary Structure SAIDQLEKELEDLRSRFSQAFQVLDGFSQLQTHFEQLTQTQQELEQSLSQAKNSLEDAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC APSELQEQYTELESQFEAKYAQLQSDILDLRHSFEATTYDLQEQLHHDRSQLKQLEQTAA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAPGADTNKLDWLENSMQDLSNLIYADRSALQHLDRRLNHVKRVTDIITIVGASGFFVMT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IIMVVTR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA