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The map label for this gene is 158338037

Identifier: 158338037

GI number: 158338037

Start: 4968231

End: 4968641

Strand: Direct

Name: 158338037

Synonym: AM1_4924

Alternate gene names: NA

Gene position: 4968231-4968641 (Clockwise)

Preceding gene: 158338036

Following gene: 158338038

Centisome position: 76.39

GC content: 44.77

Gene sequence:

>411_bases
ATGGAACTAGATCAAGCACTCGTCGATGCTGCCATTGAACTTTTAGAAAAGCATTTTCCTGGTGAAGAAGGAATCGCTGC
GGCTATGTACACCGAAGATAGGGAAGTCTTAACCAGTATATTTTTCGAACCTGAATGGGGCAGTGGAATGCTATGTGCTG
AAACGGGTGCGATTTGTGGAGCGGAGAAATTAGGTAAACGTATCATTGCCTCTGTTTGTGTTTCCAGACAAACAGGTACT
TCGCCCATTGTGATCTTGACGCCTTGCGGTATTTGTCAGGAACGTCTGTTTCATTGGGGGCAAGACGTAGAAGTGGCAGT
TCCCACTATTGACGATGCCACCCAGTGGGAGGTTAAGACCTTGAAAGAGGTCCAACCTTATTATTGGGGTAATGCTTTTA
AAAAAATATGA

Upstream 100 bases:

>100_bases
AATCTTCCCCCATTATATCGGGTCAAAAATACCCGTTGATTTGGTGTTTCCTAACCCTGCACTGAAGTGGATACGATTAT
CGTGCGTTGATCACTTAATA

Downstream 100 bases:

>100_bases
GTTTTGCCCCTCCAGATATAGATTTGCGCAAAGCTTTCTGGCCTAATCACCAGGACCTATTTTTCAAACTTTGCTCCACA
GTGGTGTGGGATGTTCGAAT

Product: cytidine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MELDQALVDAAIELLEKHFPGEEGIAAAMYTEDREVLTSIFFEPEWGSGMLCAETGAICGAEKLGKRIIASVCVSRQTGT
SPIVILTPCGICQERLFHWGQDVEVAVPTIDDATQWEVKTLKEVQPYYWGNAFKKI

Sequences:

>Translated_136_residues
MELDQALVDAAIELLEKHFPGEEGIAAAMYTEDREVLTSIFFEPEWGSGMLCAETGAICGAEKLGKRIIASVCVSRQTGT
SPIVILTPCGICQERLFHWGQDVEVAVPTIDDATQWEVKTLKEVQPYYWGNAFKKI
>Mature_136_residues
MELDQALVDAAIELLEKHFPGEEGIAAAMYTEDREVLTSIFFEPEWGSGMLCAETGAICGAEKLGKRIIASVCVSRQTGT
SPIVILTPCGICQERLFHWGQDVEVAVPTIDDATQWEVKTLKEVQPYYWGNAFKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15051; Mature: 15051

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDQALVDAAIELLEKHFPGEEGIAAAMYTEDREVLTSIFFEPEWGSGMLCAETGAICG
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEEECCCCCCC
AEKLGKRIIASVCVSRQTGTSPIVILTPCGICQERLFHWGQDVEVAVPTIDDATQWEVKT
HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
LKEVQPYYWGNAFKKI
HHHCCCCCCCHHHHCC
>Mature Secondary Structure
MELDQALVDAAIELLEKHFPGEEGIAAAMYTEDREVLTSIFFEPEWGSGMLCAETGAICG
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEEEECCCCCCC
AEKLGKRIIASVCVSRQTGTSPIVILTPCGICQERLFHWGQDVEVAVPTIDDATQWEVKT
HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHH
LKEVQPYYWGNAFKKI
HHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA