Click here to switch to the map view.

The map label for this gene is hli

Identifier: 158338029

GI number: 158338029

Start: 4962146

End: 4962304

Strand: Direct

Name: hli

Synonym: AM1_4916

Alternate gene names: NA

Gene position: 4962146-4962304 (Clockwise)

Preceding gene: 158338028

Following gene: 158338030

Centisome position: 76.3

GC content: 42.14

Gene sequence:

>159_bases
ATGAACCCATCAGATCCAGAACCAATGTGGGGCTTCACTGATTTTGCTGAAAACTTCAGCGGTCGCCTTGCAATGCTTGG
TTTTTTCCTAGGCTTTGTTACTGAAGTCATTTCTGGCGAAGGAATGCTTGCACAAATTCTTTCCCTATTTAGTTACTAA

Upstream 100 bases:

>100_bases
CCAATGTTCAAAGACGTATGTACTCAACCCACAAAAATCACACGTAATATCATATACTTAATATAAAGTTACATTAAGGT
ACTTACGGAGCCTTCATCCT

Downstream 100 bases:

>100_bases
AGCTTAGTAGCACAACTGTGTGACTCTTCTCATTGAGAAGCAGCATCGCTGCCATTCTCTAGCTGATTAGCCAATTTCTA
TCAAACTTTCAATATCTTTG

Product: high light inducible protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MNPSDPEPMWGFTDFAENFSGRLAMLGFFLGFVTEVISGEGMLAQILSLFSY

Sequences:

>Translated_52_residues
MNPSDPEPMWGFTDFAENFSGRLAMLGFFLGFVTEVISGEGMLAQILSLFSY
>Mature_52_residues
MNPSDPEPMWGFTDFAENFSGRLAMLGFFLGFVTEVISGEGMLAQILSLFSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5770; Mature: 5770

Theoretical pI: Translated: 3.56; Mature: 3.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPSDPEPMWGFTDFAENFSGRLAMLGFFLGFVTEVISGEGMLAQILSLFSY
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNPSDPEPMWGFTDFAENFSGRLAMLGFFLGFVTEVISGEGMLAQILSLFSY
CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA