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The map label for this gene is psy [H]

Identifier: 158337938

GI number: 158337938

Start: 4861026

End: 4861967

Strand: Reverse

Name: psy [H]

Synonym: AM1_4825

Alternate gene names: 158337938

Gene position: 4861967-4861026 (Counterclockwise)

Preceding gene: 158337939

Following gene: 158337937

Centisome position: 74.76

GC content: 51.8

Gene sequence:

>942_bases
ATGCTGCAACTGCCTGAAACTCCAAGACCCACAAAAAAACTGGCGTCTCTTGAAGACTCCTACGAGCAATGTCGGCAAGT
AACCGCCGATTATGCCAAGACCTTTTATCTGGGCACTCAGCTGATGTCGCCCGAAAAGCGGCAAGGCGTTTGGGCTATTT
ATGTCTGGTGTCGGCTGACGGATGAATTAGTAGATGGTCCCCAAGCGGCGTTTACCACCTCTGAGACGCTAGATAAGTGG
GAAGAACAGCTTGAATCTGTGTTCGCAGGCCATCCTGTGGATGACCCAGATGTAGCCCTTGTGGACACCGTAGAACGCTT
TGGCCTCGATATCCAACCGTTCCGGGATATGATTGCCGGACAGCGAATGGATTTAGTTCGCGATCGCTATGAAACCTTTG
AAGACTTGCACCTCTACTGCTACCGGGTTGCCGGGACGGTGGGTCTAATGTCGGCCCAGATTATGGGAGTGGAACGCTTT
TGCGATCGCTTACAGGCTCCCTGGAGTCCCCCTAGAGTTCTTAACAATCCCGTCAATACCATTAACAAGGCCGTTGATTT
AGGCATTGCCAATCAGCTTACTAATATTCTCCGGGACGTGGGTGAAGATGCTCGTCGAGGGCGGATCTACCTCCCCCTAG
AGGATTTAGCTGCCTTTGACTACACCGAAGCAGACTTATTCAATGGCGTCATCGACGATCGCTGGCGAGCCTTTATGAAG
TTCCAAATCCGTCGGGCGCGCAAATATTTTGCTCAGGCGGAGTCAGGAATTGGCACCCTGCAAAAGGATGCTCGCTGGCC
CGTATGGTCGGCTCTGGTGCTCTACCGCCAAATTCTGGATGTGATTGAGCAGAACCAATATGATGTCTTTACCCGTCGGG
CCTACGTTCCTAGTCGACGGAAGCTGATGTCCTTACCTCTGGCTTGGCTTAAATCCTTGTAA

Upstream 100 bases:

>100_bases
TCTGGTAAGCTGACAGCACAAGCCATTAACAGTGCCAAAGCTCTTTCATCCTCAAATAACGCTTCCGTAACGTCCAAGCC
AGTTTCCCAGTCAATCCCGA

Downstream 100 bases:

>100_bases
GCTTCTGGCTTAACCCAGAGAACCTGAGCCATAGGTTAAAATTTTAAGAAATGTTATCGCCGTGTCTCCAACGAAGAGCG
GCTGTTGCTACGGTTTGCCT

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MLQLPETPRPTKKLASLEDSYEQCRQVTADYAKTFYLGTQLMSPEKRQGVWAIYVWCRLTDELVDGPQAAFTTSETLDKW
EEQLESVFAGHPVDDPDVALVDTVERFGLDIQPFRDMIAGQRMDLVRDRYETFEDLHLYCYRVAGTVGLMSAQIMGVERF
CDRLQAPWSPPRVLNNPVNTINKAVDLGIANQLTNILRDVGEDARRGRIYLPLEDLAAFDYTEADLFNGVIDDRWRAFMK
FQIRRARKYFAQAESGIGTLQKDARWPVWSALVLYRQILDVIEQNQYDVFTRRAYVPSRRKLMSLPLAWLKSL

Sequences:

>Translated_313_residues
MLQLPETPRPTKKLASLEDSYEQCRQVTADYAKTFYLGTQLMSPEKRQGVWAIYVWCRLTDELVDGPQAAFTTSETLDKW
EEQLESVFAGHPVDDPDVALVDTVERFGLDIQPFRDMIAGQRMDLVRDRYETFEDLHLYCYRVAGTVGLMSAQIMGVERF
CDRLQAPWSPPRVLNNPVNTINKAVDLGIANQLTNILRDVGEDARRGRIYLPLEDLAAFDYTEADLFNGVIDDRWRAFMK
FQIRRARKYFAQAESGIGTLQKDARWPVWSALVLYRQILDVIEQNQYDVFTRRAYVPSRRKLMSLPLAWLKSL
>Mature_313_residues
MLQLPETPRPTKKLASLEDSYEQCRQVTADYAKTFYLGTQLMSPEKRQGVWAIYVWCRLTDELVDGPQAAFTTSETLDKW
EEQLESVFAGHPVDDPDVALVDTVERFGLDIQPFRDMIAGQRMDLVRDRYETFEDLHLYCYRVAGTVGLMSAQIMGVERF
CDRLQAPWSPPRVLNNPVNTINKAVDLGIANQLTNILRDVGEDARRGRIYLPLEDLAAFDYTEADLFNGVIDDRWRAFMK
FQIRRARKYFAQAESGIGTLQKDARWPVWSALVLYRQILDVIEQNQYDVFTRRAYVPSRRKLMSLPLAWLKSL

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 36218; Mature: 36218

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQLPETPRPTKKLASLEDSYEQCRQVTADYAKTFYLGTQLMSPEKRQGVWAIYVWCRLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEHHHHHHH
DELVDGPQAAFTTSETLDKWEEQLESVFAGHPVDDPDVALVDTVERFGLDIQPFRDMIAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCC
QRMDLVRDRYETFEDLHLYCYRVAGTVGLMSAQIMGVERFCDRLQAPWSPPRVLNNPVNT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHH
INKAVDLGIANQLTNILRDVGEDARRGRIYLPLEDLAAFDYTEADLFNGVIDDRWRAFMK
HHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FQIRRARKYFAQAESGIGTLQKDARWPVWSALVLYRQILDVIEQNQYDVFTRRAYVPSRR
HHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
KLMSLPLAWLKSL
HHHHHHHHHHHCC
>Mature Secondary Structure
MLQLPETPRPTKKLASLEDSYEQCRQVTADYAKTFYLGTQLMSPEKRQGVWAIYVWCRLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEHHHHHHH
DELVDGPQAAFTTSETLDKWEEQLESVFAGHPVDDPDVALVDTVERFGLDIQPFRDMIAG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCC
QRMDLVRDRYETFEDLHLYCYRVAGTVGLMSAQIMGVERFCDRLQAPWSPPRVLNNPVNT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHH
INKAVDLGIANQLTNILRDVGEDARRGRIYLPLEDLAAFDYTEADLFNGVIDDRWRAFMK
HHHHHHHHHHHHHHHHHHHHCHHHHCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FQIRRARKYFAQAESGIGTLQKDARWPVWSALVLYRQILDVIEQNQYDVFTRRAYVPSRR
HHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
KLMSLPLAWLKSL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8018713; 8905231 [H]