| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337928
Identifier: 158337928
GI number: 158337928
Start: 4851712
End: 4852206
Strand: Direct
Name: 158337928
Synonym: AM1_4815
Alternate gene names: NA
Gene position: 4851712-4852206 (Clockwise)
Preceding gene: 158337923
Following gene: 158337929
Centisome position: 74.6
GC content: 48.08
Gene sequence:
>495_bases ATGCTCCGACTCAAATCCGCCTTAATCATAGGACTTTTAAGTGCCCTTTCTCTGACTGCTTGTAGCGAAGCAGGTGATGC GGTTAAGGATACGGCTGACAAGGCCAAAGAAACCGCTGCTGAAACCACCGAGAAGGTAACCGATACCGCAACTGAAACCG CAGAAAAAGCTAAAGATACTGTTTCAGATACCGTTAACAAAGGTGCAGACCTCGTTGCCCTCAAAGATAACGTTTCCACC ATGAAGGATGGCGTTACCTCAACCCTGGATGCTGCAAAATCTGGAGATTTTGACACTGCAAAAACAGAATTTGCCAAAGT ACAGGATGCTTGGCCTGCGCTCAAGGACAGCATCAAGCCTGACTCTGCCCAATCCATTCAAGATGGTATTGAGACCGTCA AAGCAAGCCTAGGTGAAGGTGAGCCCAACAAGGACAAAGTTGTTGGCGAATTGACCAACCTGCTGAAGTCTGTCACAGGC ATCAAGCTAGGCTAG
Upstream 100 bases:
>100_bases GGGTACCAATCTGATTAACTGTCCCAAATGGACTTGTGCAAATTTCCTATGTTCTCGATAATATTAGCTGGAAAGTATAA ATGCTTAGAGAAACAATATT
Downstream 100 bases:
>100_bases CGTCTCATTAAACTTGTAATCAATGTTAAGGGCTAGAAATTGTAACTATTTTCTAGCCTTTCTTATCTCTTCTTCAGGGG CCATCGTTGCTAATCTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MLRLKSALIIGLLSALSLTACSEAGDAVKDTADKAKETAAETTEKVTDTATETAEKAKDTVSDTVNKGADLVALKDNVST MKDGVTSTLDAAKSGDFDTAKTEFAKVQDAWPALKDSIKPDSAQSIQDGIETVKASLGEGEPNKDKVVGELTNLLKSVTG IKLG
Sequences:
>Translated_164_residues MLRLKSALIIGLLSALSLTACSEAGDAVKDTADKAKETAAETTEKVTDTATETAEKAKDTVSDTVNKGADLVALKDNVST MKDGVTSTLDAAKSGDFDTAKTEFAKVQDAWPALKDSIKPDSAQSIQDGIETVKASLGEGEPNKDKVVGELTNLLKSVTG IKLG >Mature_164_residues MLRLKSALIIGLLSALSLTACSEAGDAVKDTADKAKETAAETTEKVTDTATETAEKAKDTVSDTVNKGADLVALKDNVST MKDGVTSTLDAAKSGDFDTAKTEFAKVQDAWPALKDSIKPDSAQSIQDGIETVKASLGEGEPNKDKVVGELTNLLKSVTG IKLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17016; Mature: 17016
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLKSALIIGLLSALSLTACSEAGDAVKDTADKAKETAAETTEKVTDTATETAEKAKDT CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSDTVNKGADLVALKDNVSTMKDGVTSTLDAAKSGDFDTAKTEFAKVQDAWPALKDSIKP HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC DSAQSIQDGIETVKASLGEGEPNKDKVVGELTNLLKSVTGIKLG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRLKSALIIGLLSALSLTACSEAGDAVKDTADKAKETAAETTEKVTDTATETAEKAKDT CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSDTVNKGADLVALKDNVSTMKDGVTSTLDAAKSGDFDTAKTEFAKVQDAWPALKDSIKP HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC DSAQSIQDGIETVKASLGEGEPNKDKVVGELTNLLKSVTGIKLG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA