| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is rpmG
Identifier: 158337926
GI number: 158337926
Start: 4849255
End: 4849443
Strand: Reverse
Name: rpmG
Synonym: AM1_4813
Alternate gene names: 158337926
Gene position: 4849443-4849255 (Counterclockwise)
Preceding gene: 158337927
Following gene: 158337925
Centisome position: 74.56
GC content: 43.92
Gene sequence:
>189_bases ATGGCAAAAGGTGTTCGGATCATCGTCACATTGGAATGTACCGAATGTCGGTCCAACTCCAATAAGCGATCGCCAGGGGT ATCCCGGTACACAACCACGAAAAATAGACGTAATACTACGTCTCGGCTGGAACTGAAGAAGTTCTGCACTCATTGCAATA AGCATACAAACCATAAAGAAATTAAGTAG
Upstream 100 bases:
>100_bases TTGACCTTAGTTCATCGTTAAAAAAAGTAGCTGATTTTCGACTAATCATGAGATAATTATCGTTTGTGTCCAATTAGAAA TTTTGATGCGGTAAAAACAC
Downstream 100 bases:
>100_bases TTGTCCACCTATTAGACGTTTATCAAGACCTTATGCCTTACTATCGCCGCCGTGTTTCTCCGATCAAGCCAGGTGATCCG ATTGATTACAAGGATGTTGA
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MAKGVRIIVTLECTECRSNSNKRSPGVSRYTTTKNRRNTTSRLELKKFCTHCNKHTNHKEIK
Sequences:
>Translated_62_residues MAKGVRIIVTLECTECRSNSNKRSPGVSRYTTTKNRRNTTSRLELKKFCTHCNKHTNHKEIK >Mature_61_residues AKGVRIIVTLECTECRSNSNKRSPGVSRYTTTKNRRNTTSRLELKKFCTHCNKHTNHKEIK
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL33_ACAM1 (B0C2J4)
Other databases:
- EMBL: CP000828 - RefSeq: YP_001519102.1 - ProteinModelPortal: B0C2J4 - SMR: B0C2J4 - GeneID: 5683613 - GenomeReviews: CP000828_GR - KEGG: amr:AM1_4813 - HOGENOM: HBG751058 - OMA: RIVITLE - ProtClustDB: PRK00504 - BioCyc: AMAR329726:AM1_4813-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00294 - InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 - TIGRFAMs: TIGR01023
Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd
EC number: NA
Molecular weight: Translated: 7207; Mature: 7076
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGVRIIVTLECTECRSNSNKRSPGVSRYTTTKNRRNTTSRLELKKFCTHCNKHTNHKE CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCC IK CC >Mature Secondary Structure AKGVRIIVTLECTECRSNSNKRSPGVSRYTTTKNRRNTTSRLELKKFCTHCNKHTNHKE CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCC IK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA