| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is hsdM [C]
Identifier: 158337899
GI number: 158337899
Start: 4820804
End: 4823227
Strand: Reverse
Name: hsdM [C]
Synonym: AM1_4786
Alternate gene names: 158337899
Gene position: 4823227-4820804 (Counterclockwise)
Preceding gene: 158337901
Following gene: 158337898
Centisome position: 74.16
GC content: 50.74
Gene sequence:
>2424_bases ATGGATGCAGCATCACAAAACAAGCTGATTTCATTCATTTGGTCGATTGCAGATGACTGCTTGCGTGATGTCTACGTTCG CGGAAAATACCGCGATGTCATCTTGCCGATGTTTGTGCTGCGGCGGTTAGATTGTCTGCTGGAGGAGACCAAGGATGCAG TCATGGAAGAGGTTCGGTTTCAGCGGGAATCCGTGGGGCTGACCGAGCTAGAGTCTGGTGCGTTAAAGGATGCCTCGGGC TATGTGTTCTACAACACTTCAGATTGGACGCTGAAAAGATTAGTTGAAACGGCGTCCAATAACCGCCAAATTTTAGAGGC CAACTTTAAAGCCTATCTGGATGGATTTAGCGAGAACGTCAAAGAGATCATTGACAGTTTTTATCTGCGGGACCAAATCA AACGGATGGTGCAGGCGGATGTACTGTTAGATGTCTTGGAAAAGTTTACGAGTCCCTATATCAATTTCAGCCCAACTCAA GGTGAAGATCCGGATGGACGCAAGCTGGCGGGTTTGAGCAATCTGGGGATGGGCTATGTGTTTGAGGAGCTGATCCGTAA GTTTAACGAAGAAAATAACGAGGAGGCTGGAGAGCACTTCACCCCCCGCGAGGTGATCAAGCTGATGACACACTTGCTGT TTATGCCAGTGAAGGAGCAGCTTCCGCCCGTGATGTTGATCTATGACGGGGCCTGCGGTTCAGGGGGGATGTTGACAGAG TCCCAAAACTTTATCAGCGACCCGGAGGGGGGAATCAAATCAGATGCTCAGGTCTACCTCTATGGCAAGGAGGTCAACCC GGAGACCTATGGCATTTGCAAGTCGGACATGATGATTAAGGGGAATAGTCCTGAGAACATCAAACTGGGATCGACGCTGG CGATGGATGAGTTTGCCGGAATGCGGTTTGATTTCATGCTGGAAAATCCACCCTATGGCAAGTCCTACGCAGCGGATCAA AAACATATCCTAGATGGCAAGGATGTCCTGGATGAGCGGTTTTTGTTACCACTGAAGGATTTTTGGGATGAGGAAAGTTT AGAGAAGGCAACGCCCCGCTCTTCGGATGGGCAGTTGCTGTTTCTAATGGATATGGTTAGCAAAATGAAGCCTCTGGACC AGAGTCCGGCAGGTTCCAGAATTGCGTCAGTTCACAATGGGTCTTCGCTGTTTACAGGGGATGCGGGTAGCGGGGAGAGC AATATTCGCCGCTACATCATTGAAAATGACTGGCTGGAGGCGATCGTCCAGTTGCCTCAGAATATGTTTTACAACACCGG CATTTCCACCTATGTGTGGGTGCTGTCGAATAATAAGGCACCGGAACGGCAGGGAAAGGTGCAGCTGATTGATAGGTCGG AGCTGTATCGCAAGCTGCGGAAGAATCTGGGGGCGAAGAACTGTGAGTTTGCACCGGAGCAGATTGAGAAGATTACTCAC CTGTATTTAGATCGGGTGCATCAGCCGACGTTGCCGCCTAGTGAAGATAGGGAGCTGCCACCGCCGCCCATCTCTAAGGT GTTTGATAATCAGGATTTTGGCTTTTACAAGGTAACTGTGGAACGGCCCCTGCGGCTGTTAGCTCAGTTTACGCCGGAGC GGGTGGCGACGCTGCGCTATGTGCCTGTCCTGGCGGAGGTAATGGAGTGGGCCTATGGTGAGTGGGGTGATGAGATTTAC ACGAGCCTAACGGACCATAAGCAAAAAATTGAGGAATACCTGGAAAAGGAAGAAATTAGCCTGACGGCGAAGAATCGCAA GGCGTTGTTTACAGCGAAGACCTGGGAAAATCAGCGGGATTTGATGCAGGTAGCGGAGCAGCTCATGGCCTCGGTGGAGC AGGAGGTTTGGCATGATTTTAATGATTTTGCTGAGCGGGTGAATGATACGCTCAAAACTTTGGCCAGACAGTTGGACAGC AAGCTGTCGGCTAGTGAGAAGAGGCAAATTTTTAATGCGGTGAGTTGGCGGGATGAGGCGGCGGCCAGGGTGATTAAAAA GGTGCATAAGCTGAAGGGTGAGAAGCTAGCGGAGTTATTGGAGCATTTGGGCACCACGGAGGAGCACCTGGCGGACTTTG GGTACTGGCCTGGGGAAACGGCGGGGCAGTGGATTGAGTATGAGACGGATAGTGAGCTGCGGGATACGGAAAGTGTGCCG TTGAACTATGGGCAGGCACTGGAGCGGGGTACGGCGCAGATCCATGGGTATTTTTTGGCGGAGGTGCGGCCCCATGTTGA GGATGCTTGGATCGCGTTGGATAGTACGAAGATTGGCTATGAGATTAATTTCAATAAGTATTTTTATCAGCACAAACCGT TGAGGAAGCTGGAGACGGTCGTTGAGGAAATTTTAGAGCTGGAGAAGAAGACGGAAGGCTTATTGAAGCGGTTAGTCAGT TTTGGGGCGACTACCGATGGCTAA
Upstream 100 bases:
>100_bases GGATAACCAAAAGAATATGAGTATCTAGGATGAAATTGTCCAAAAGGGGGCATAGTGGAGGATGTTCTTTGAGTATGACT TGACTTAGCAGAGGTAGCTG
Downstream 100 bases:
>100_bases AGATATCTTTCATGATGCGGTGAAGCGTGGTCTGGAAAGTGCAGGCTGGACGGTGACGGACGATCCGCTAAGCCTAAAGT TTGGCGATACTCGGATCTAT
Product: type I restriction-modification system, M subunit
Products: NA
Alternate protein names: M.MjaXP [H]
Number of amino acids: Translated: 807; Mature: 807
Protein sequence:
>807_residues MDAASQNKLISFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDCLLEETKDAVMEEVRFQRESVGLTELESGALKDASG YVFYNTSDWTLKRLVETASNNRQILEANFKAYLDGFSENVKEIIDSFYLRDQIKRMVQADVLLDVLEKFTSPYINFSPTQ GEDPDGRKLAGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIKLMTHLLFMPVKEQLPPVMLIYDGACGSGGMLTE SQNFISDPEGGIKSDAQVYLYGKEVNPETYGICKSDMMIKGNSPENIKLGSTLAMDEFAGMRFDFMLENPPYGKSYAADQ KHILDGKDVLDERFLLPLKDFWDEESLEKATPRSSDGQLLFLMDMVSKMKPLDQSPAGSRIASVHNGSSLFTGDAGSGES NIRRYIIENDWLEAIVQLPQNMFYNTGISTYVWVLSNNKAPERQGKVQLIDRSELYRKLRKNLGAKNCEFAPEQIEKITH LYLDRVHQPTLPPSEDRELPPPPISKVFDNQDFGFYKVTVERPLRLLAQFTPERVATLRYVPVLAEVMEWAYGEWGDEIY TSLTDHKQKIEEYLEKEEISLTAKNRKALFTAKTWENQRDLMQVAEQLMASVEQEVWHDFNDFAERVNDTLKTLARQLDS KLSASEKRQIFNAVSWRDEAAARVIKKVHKLKGEKLAELLEHLGTTEEHLADFGYWPGETAGQWIEYETDSELRDTESVP LNYGQALERGTAQIHGYFLAEVRPHVEDAWIALDSTKIGYEINFNKYFYQHKPLRKLETVVEEILELEKKTEGLLKRLVS FGATTDG
Sequences:
>Translated_807_residues MDAASQNKLISFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDCLLEETKDAVMEEVRFQRESVGLTELESGALKDASG YVFYNTSDWTLKRLVETASNNRQILEANFKAYLDGFSENVKEIIDSFYLRDQIKRMVQADVLLDVLEKFTSPYINFSPTQ GEDPDGRKLAGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIKLMTHLLFMPVKEQLPPVMLIYDGACGSGGMLTE SQNFISDPEGGIKSDAQVYLYGKEVNPETYGICKSDMMIKGNSPENIKLGSTLAMDEFAGMRFDFMLENPPYGKSYAADQ KHILDGKDVLDERFLLPLKDFWDEESLEKATPRSSDGQLLFLMDMVSKMKPLDQSPAGSRIASVHNGSSLFTGDAGSGES NIRRYIIENDWLEAIVQLPQNMFYNTGISTYVWVLSNNKAPERQGKVQLIDRSELYRKLRKNLGAKNCEFAPEQIEKITH LYLDRVHQPTLPPSEDRELPPPPISKVFDNQDFGFYKVTVERPLRLLAQFTPERVATLRYVPVLAEVMEWAYGEWGDEIY TSLTDHKQKIEEYLEKEEISLTAKNRKALFTAKTWENQRDLMQVAEQLMASVEQEVWHDFNDFAERVNDTLKTLARQLDS KLSASEKRQIFNAVSWRDEAAARVIKKVHKLKGEKLAELLEHLGTTEEHLADFGYWPGETAGQWIEYETDSELRDTESVP LNYGQALERGTAQIHGYFLAEVRPHVEDAWIALDSTKIGYEINFNKYFYQHKPLRKLETVVEEILELEKKTEGLLKRLVS FGATTDG >Mature_807_residues MDAASQNKLISFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDCLLEETKDAVMEEVRFQRESVGLTELESGALKDASG YVFYNTSDWTLKRLVETASNNRQILEANFKAYLDGFSENVKEIIDSFYLRDQIKRMVQADVLLDVLEKFTSPYINFSPTQ GEDPDGRKLAGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIKLMTHLLFMPVKEQLPPVMLIYDGACGSGGMLTE SQNFISDPEGGIKSDAQVYLYGKEVNPETYGICKSDMMIKGNSPENIKLGSTLAMDEFAGMRFDFMLENPPYGKSYAADQ KHILDGKDVLDERFLLPLKDFWDEESLEKATPRSSDGQLLFLMDMVSKMKPLDQSPAGSRIASVHNGSSLFTGDAGSGES NIRRYIIENDWLEAIVQLPQNMFYNTGISTYVWVLSNNKAPERQGKVQLIDRSELYRKLRKNLGAKNCEFAPEQIEKITH LYLDRVHQPTLPPSEDRELPPPPISKVFDNQDFGFYKVTVERPLRLLAQFTPERVATLRYVPVLAEVMEWAYGEWGDEIY TSLTDHKQKIEEYLEKEEISLTAKNRKALFTAKTWENQRDLMQVAEQLMASVEQEVWHDFNDFAERVNDTLKTLARQLDS KLSASEKRQIFNAVSWRDEAAARVIKKVHKLKGEKLAELLEHLGTTEEHLADFGYWPGETAGQWIEYETDSELRDTESVP LNYGQALERGTAQIHGYFLAEVRPHVEDAWIALDSTKIGYEINFNKYFYQHKPLRKLETVVEEILELEKKTEGLLKRLVS FGATTDG
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=332, Percent_Identity=25.6024096385542, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 92469; Mature: 92469
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAASQNKLISFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDCLLEETKDAVMEEVRF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRESVGLTELESGALKDASGYVFYNTSDWTLKRLVETASNNRQILEANFKAYLDGFSENV HHHHCCCHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH KEIIDSFYLRDQIKRMVQADVLLDVLEKFTSPYINFSPTQGEDPDGRKLAGLSNLGMGYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEECCHHHCCHHHH FEELIRKFNEENNEEAGEHFTPREVIKLMTHLLFMPVKEQLPPVMLIYDGACGSGGMLTE HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC SQNFISDPEGGIKSDAQVYLYGKEVNPETYGICKSDMMIKGNSPENIKLGSTLAMDEFAG CCCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCEEEECCCCCCEECCCCHHHHHHCC MRFDFMLENPPYGKSYAADQKHILDGKDVLDERFLLPLKDFWDEESLEKATPRSSDGQLL CEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHCCCHHHHCCHHHHHHCCCCCCCCCEE FLMDMVSKMKPLDQSPAGSRIASVHNGSSLFTGDAGSGESNIRRYIIENDWLEAIVQLPQ EHHHHHHHHCCCCCCCCCCHHHEECCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHH NMFYNTGISTYVWVLSNNKAPERQGKVQLIDRSELYRKLRKNLGAKNCEFAPEQIEKITH HHHHHCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LYLDRVHQPTLPPSEDRELPPPPISKVFDNQDFGFYKVTVERPLRLLAQFTPERVATLRY HHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHHH VPVLAEVMEWAYGEWGDEIYTSLTDHKQKIEEYLEKEEISLTAKNRKALFTAKTWENQRD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHH LMQVAEQLMASVEQEVWHDFNDFAERVNDTLKTLARQLDSKLSASEKRQIFNAVSWRDEA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH AARVIKKVHKLKGEKLAELLEHLGTTEEHLADFGYWPGETAGQWIEYETDSELRDTESVP HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCC LNYGQALERGTAQIHGYFLAEVRPHVEDAWIALDSTKIGYEINFNKYFYQHKPLRKLETV CCHHHHHHHCHHHHHHEEEEHHCCCCCHHEEEEECCEEEEEEECCHHHHHCCCHHHHHHH VEEILELEKKTEGLLKRLVSFGATTDG HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDAASQNKLISFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDCLLEETKDAVMEEVRF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRESVGLTELESGALKDASGYVFYNTSDWTLKRLVETASNNRQILEANFKAYLDGFSENV HHHHCCCHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH KEIIDSFYLRDQIKRMVQADVLLDVLEKFTSPYINFSPTQGEDPDGRKLAGLSNLGMGYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCEECCHHHCCHHHH FEELIRKFNEENNEEAGEHFTPREVIKLMTHLLFMPVKEQLPPVMLIYDGACGSGGMLTE HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC SQNFISDPEGGIKSDAQVYLYGKEVNPETYGICKSDMMIKGNSPENIKLGSTLAMDEFAG CCCCCCCCCCCCCCCCEEEEEECCCCCCHHCCCCCCEEEECCCCCCEECCCCHHHHHHCC MRFDFMLENPPYGKSYAADQKHILDGKDVLDERFLLPLKDFWDEESLEKATPRSSDGQLL CEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHCCCHHHHCCHHHHHHCCCCCCCCCEE FLMDMVSKMKPLDQSPAGSRIASVHNGSSLFTGDAGSGESNIRRYIIENDWLEAIVQLPQ EHHHHHHHHCCCCCCCCCCHHHEECCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHH NMFYNTGISTYVWVLSNNKAPERQGKVQLIDRSELYRKLRKNLGAKNCEFAPEQIEKITH HHHHHCCCCEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LYLDRVHQPTLPPSEDRELPPPPISKVFDNQDFGFYKVTVERPLRLLAQFTPERVATLRY HHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHCHHHHHHHHH VPVLAEVMEWAYGEWGDEIYTSLTDHKQKIEEYLEKEEISLTAKNRKALFTAKTWENQRD HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCCHHH LMQVAEQLMASVEQEVWHDFNDFAERVNDTLKTLARQLDSKLSASEKRQIFNAVSWRDEA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH AARVIKKVHKLKGEKLAELLEHLGTTEEHLADFGYWPGETAGQWIEYETDSELRDTESVP HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCC LNYGQALERGTAQIHGYFLAEVRPHVEDAWIALDSTKIGYEINFNKYFYQHKPLRKLETV CCHHHHHHHCHHHHHHEEEEHHCCCCCHHEEEEECCEEEEEEECCHHHHHCCCHHHHHHH VEEILELEKKTEGLLKRLVSFGATTDG HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]