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The map label for this gene is 158337861

Identifier: 158337861

GI number: 158337861

Start: 4783526

End: 4785643

Strand: Direct

Name: 158337861

Synonym: AM1_4747

Alternate gene names: NA

Gene position: 4783526-4785643 (Clockwise)

Preceding gene: 158337860

Following gene: 158337869

Centisome position: 73.55

GC content: 50.52

Gene sequence:

>2118_bases
TTGGGATGGTCGACGGAAGTCCAACCAACGTCAGTACAGAGTTCTGCTGCGGCCCGTTATACCAATGCCAAGGTAGTCTT
AGTGGGGGAAAGTGGAGTAGGCAAAACGGGGTTGGCCCTCCGGCTCACCCAAAATCGATTTGAAGCCACCATTTCCACCG
ATGCCCACTGGGCTACTCAATTACGACTCCCTCACGATAATAGCCCGGACGGAATTGATCGGGAAATTTGGCTATGGGAT
TTTGCCGGGCAAGCCGACTATCGCCTGATTCACCAACTGTTTATGGATGAAACGGCCCTGGCGGTCCTGGTCTTTAATCC
CCAAAGCGAAGACCCGTTTGAAGGGCTGAGTCAATGGGATCGAGAGATTACTCGGGCTGCACAACGCCCCTTTAAGAAGC
TATTGGTAGCGGGACGCTGCGATCGAGGCCGATTAATGGTGAGCCAGAGCCGCATTCAACAGTTTGCCCAAAACCACAGT
TTTGTTCAATACTTGGAAACCAGTGCTCTCAGTGGTCATGGCTGTCAGGATTTAAAAACCGCCATAATCGATGAAATTGA
CTGGGACAGCATTCCCCACACCTCATCTCCCCGCATTTTCAAACTCCTAAAAGATGAAATTCTCCAGCTCCGAGACCAGG
GATTTGTCCTGTTTCGCATCAGTGAACTGAAGCAGCAAATGGAGATGCGTCTACCAGAGGAGCAATTTTCCCTTGCCCAA
CTTCGAGCTGTGGTCGGATTGTTGGCAGGCCCCGGTATTGTCTGGAAGTTGGAATTTGGTGACTTTGTCCTGCTCCAGCC
AGAGTGGATCAACAAATATGCCGCCGCCGTCATTCGCAGCGTCCGAGAAATTGGCGAAATTGGCATTATTAATGAAGACA
AAATCCTTAGAAGCGACCTTAATTTCACCCTCGATTACCGTCCCACCGACAATAGTGCTCACGAAGGGAATGGAACCAAC
AGTACCCCCCAGCAAATGGACAGGCTCGATGCCATCCAAGAAGATATTATTCTGCGGGCCATGCATCAAACCTTGGTGGA
TCGGGGTATTTGTTCTAGAACCTCAACTCCTTCGGGGATGGAGCTGATTTTTCCCTCCTACTGTAAGCGAGAACTCCCTG
AAGATCCGGGCCATCCGCCCGTACTGGTCACCTATCGATTTAAGGGGTTTTTGGAAGAAATTTACGCCACTCTAGTGGTC
CGCCTGCGCAACACGCCCGTTTTTGAAAACGGTGACCTCTGGCGATTTGCCGCTGACTTCCATAGCCCAACGGGCGCTCG
TATGGGCTTACTGATGGAACGCAAGCGGGACGGGGCAGGAGAAATCTCTGTTTACTTTGAGGCAGGTGTTACTGATGACC
TGAAAGTGATGTTCACCAAATATGTCCACGAACATTTGCTGACCAAAGGCAAAGACACCCTGCGCCTACGTCACTTTATT
TGTCCTCACTGTGGTCATCCCGTCCGCGATACAGAATTGGCGCACAAAAAACTAGAAGAAGATGGCCATCAAGCCCAAAT
CCGTTGCCAAAATTGCGACCAAAAGTTCGTACTTTGGGATTTGATGGAGCAGAAATTTGCCGATCCAGAGTTCCAACAAA
AGGTTCGCGATTTAGAAGCTAAAGCTAAATCTAAGATCGACCACGATAGCCAGGAACTGATTCTGAAGGGACATGCCTTT
AGCGTTGCCCAAGAAACAGGCCAAACCTTCCGTGTCCTTGCCCAAAGCAATTGGGGAGTCGATCATGAAATTGAATTTAA
AGACTGGAATGGCAACCCTAGCGGCCAAAGAGTCTACCTGCAGCTCAAACCCAGAGAGTCTTTTGCCTACGAACATCAAG
AAGGACAAGCAGTTCTGATCCACGCTAGCCCCGACCTTTGTAGCTATTGGCAGCAGCAAGCCTATCCCGTTATGCTGGTC
CTCCGGGACAACAGCGGCGACATCCTCTGGATGAATGTCACCGCGGCCTGCCAAGACTCAGAGCGGGTTCGGCCCAATTT
TGATCGGAGTGAGTCTACAACCTCAGGCCCCTTAGAGCAAACCATCATCTTTCAGGGCGAACCCTTTACAGCTCTGAACT
TACAGCGGATTCGTGATCAGCTCTTGCCACCTCGATAA

Upstream 100 bases:

>100_bases
TGGCCAATGCCTAAAATCTTTCGAGGGACACACCGATTCTGTCAGAAGCGTAATTTTGCAACCGTGCTGCTATTATGCTG
CGGCTCGGAACGGTCGGCTA

Downstream 100 bases:

>100_bases
TCATCCTCAGCAAATCCACTCTGTCCCTTGAGCCATGCAATTATTCCGTTTGAGGTGGATTAGACTCTACAGAAGTTTGG
CTCTTCGCAAGCCGCAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: WD Repeat-Containing Protein

Number of amino acids: Translated: 705; Mature: 704

Protein sequence:

>705_residues
MGWSTEVQPTSVQSSAAARYTNAKVVLVGESGVGKTGLALRLTQNRFEATISTDAHWATQLRLPHDNSPDGIDREIWLWD
FAGQADYRLIHQLFMDETALAVLVFNPQSEDPFEGLSQWDREITRAAQRPFKKLLVAGRCDRGRLMVSQSRIQQFAQNHS
FVQYLETSALSGHGCQDLKTAIIDEIDWDSIPHTSSPRIFKLLKDEILQLRDQGFVLFRISELKQQMEMRLPEEQFSLAQ
LRAVVGLLAGPGIVWKLEFGDFVLLQPEWINKYAAAVIRSVREIGEIGIINEDKILRSDLNFTLDYRPTDNSAHEGNGTN
STPQQMDRLDAIQEDIILRAMHQTLVDRGICSRTSTPSGMELIFPSYCKRELPEDPGHPPVLVTYRFKGFLEEIYATLVV
RLRNTPVFENGDLWRFAADFHSPTGARMGLLMERKRDGAGEISVYFEAGVTDDLKVMFTKYVHEHLLTKGKDTLRLRHFI
CPHCGHPVRDTELAHKKLEEDGHQAQIRCQNCDQKFVLWDLMEQKFADPEFQQKVRDLEAKAKSKIDHDSQELILKGHAF
SVAQETGQTFRVLAQSNWGVDHEIEFKDWNGNPSGQRVYLQLKPRESFAYEHQEGQAVLIHASPDLCSYWQQQAYPVMLV
LRDNSGDILWMNVTAACQDSERVRPNFDRSESTTSGPLEQTIIFQGEPFTALNLQRIRDQLLPPR

Sequences:

>Translated_705_residues
MGWSTEVQPTSVQSSAAARYTNAKVVLVGESGVGKTGLALRLTQNRFEATISTDAHWATQLRLPHDNSPDGIDREIWLWD
FAGQADYRLIHQLFMDETALAVLVFNPQSEDPFEGLSQWDREITRAAQRPFKKLLVAGRCDRGRLMVSQSRIQQFAQNHS
FVQYLETSALSGHGCQDLKTAIIDEIDWDSIPHTSSPRIFKLLKDEILQLRDQGFVLFRISELKQQMEMRLPEEQFSLAQ
LRAVVGLLAGPGIVWKLEFGDFVLLQPEWINKYAAAVIRSVREIGEIGIINEDKILRSDLNFTLDYRPTDNSAHEGNGTN
STPQQMDRLDAIQEDIILRAMHQTLVDRGICSRTSTPSGMELIFPSYCKRELPEDPGHPPVLVTYRFKGFLEEIYATLVV
RLRNTPVFENGDLWRFAADFHSPTGARMGLLMERKRDGAGEISVYFEAGVTDDLKVMFTKYVHEHLLTKGKDTLRLRHFI
CPHCGHPVRDTELAHKKLEEDGHQAQIRCQNCDQKFVLWDLMEQKFADPEFQQKVRDLEAKAKSKIDHDSQELILKGHAF
SVAQETGQTFRVLAQSNWGVDHEIEFKDWNGNPSGQRVYLQLKPRESFAYEHQEGQAVLIHASPDLCSYWQQQAYPVMLV
LRDNSGDILWMNVTAACQDSERVRPNFDRSESTTSGPLEQTIIFQGEPFTALNLQRIRDQLLPPR
>Mature_704_residues
GWSTEVQPTSVQSSAAARYTNAKVVLVGESGVGKTGLALRLTQNRFEATISTDAHWATQLRLPHDNSPDGIDREIWLWDF
AGQADYRLIHQLFMDETALAVLVFNPQSEDPFEGLSQWDREITRAAQRPFKKLLVAGRCDRGRLMVSQSRIQQFAQNHSF
VQYLETSALSGHGCQDLKTAIIDEIDWDSIPHTSSPRIFKLLKDEILQLRDQGFVLFRISELKQQMEMRLPEEQFSLAQL
RAVVGLLAGPGIVWKLEFGDFVLLQPEWINKYAAAVIRSVREIGEIGIINEDKILRSDLNFTLDYRPTDNSAHEGNGTNS
TPQQMDRLDAIQEDIILRAMHQTLVDRGICSRTSTPSGMELIFPSYCKRELPEDPGHPPVLVTYRFKGFLEEIYATLVVR
LRNTPVFENGDLWRFAADFHSPTGARMGLLMERKRDGAGEISVYFEAGVTDDLKVMFTKYVHEHLLTKGKDTLRLRHFIC
PHCGHPVRDTELAHKKLEEDGHQAQIRCQNCDQKFVLWDLMEQKFADPEFQQKVRDLEAKAKSKIDHDSQELILKGHAFS
VAQETGQTFRVLAQSNWGVDHEIEFKDWNGNPSGQRVYLQLKPRESFAYEHQEGQAVLIHASPDLCSYWQQQAYPVMLVL
RDNSGDILWMNVTAACQDSERVRPNFDRSESTTSGPLEQTIIFQGEPFTALNLQRIRDQLLPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21361418, Length=184, Percent_Identity=32.0652173913043, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI11641237, Length=156, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI10880989, Length=161, Percent_Identity=30.4347826086957, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI7706563, Length=155, Percent_Identity=27.741935483871, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI16933567, Length=147, Percent_Identity=27.891156462585, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI28376635, Length=197, Percent_Identity=26.9035532994924, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI4758988, Length=151, Percent_Identity=31.1258278145695, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI190358517, Length=166, Percent_Identity=30.1204819277108, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI4506363, Length=164, Percent_Identity=25.609756097561, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI4758984, Length=166, Percent_Identity=30.1204819277108, Blast_Score=67, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17555898, Length=160, Percent_Identity=34.375, Blast_Score=75, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25150215, Length=151, Percent_Identity=31.7880794701987, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25151658, Length=176, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17507543, Length=165, Percent_Identity=29.0909090909091, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558550, Length=151, Percent_Identity=29.8013245033113, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6321070, Length=159, Percent_Identity=30.8176100628931, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24582410, Length=167, Percent_Identity=32.3353293413174, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19920864, Length=167, Percent_Identity=32.3353293413174, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24582407, Length=167, Percent_Identity=32.3353293413174, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24639915, Length=168, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17737663, Length=148, Percent_Identity=29.0540540540541, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19549675, Length=166, Percent_Identity=30.7228915662651, Blast_Score=68, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17137216, Length=166, Percent_Identity=30.7228915662651, Blast_Score=68, Evalue=3e-11,
Organism=Drosophila melanogaster, GI17736973, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581105, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581107, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581110, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581103, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581101, Length=190, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80475; Mature: 80344

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00675 SIGMA54_INTERACT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGWSTEVQPTSVQSSAAARYTNAKVVLVGESGVGKTGLALRLTQNRFEATISTDAHWATQ
CCCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCEEEEE
LRLPHDNSPDGIDREIWLWDFAGQADYRLIHQLFMDETALAVLVFNPQSEDPFEGLSQWD
EECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
REITRAAQRPFKKLLVAGRCDRGRLMVSQSRIQQFAQNHSFVQYLETSALSGHGCQDLKT
HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHH
AIIDEIDWDSIPHTSSPRIFKLLKDEILQLRDQGFVLFRISELKQQMEMRLPEEQFSLAQ
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHH
LRAVVGLLAGPGIVWKLEFGDFVLLQPEWINKYAAAVIRSVREIGEIGIINEDKILRSDL
HHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
NFTLDYRPTDNSAHEGNGTNSTPQQMDRLDAIQEDIILRAMHQTLVDRGICSRTSTPSGM
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ELIFPSYCKRELPEDPGHPPVLVTYRFKGFLEEIYATLVVRLRNTPVFENGDLWRFAADF
EEECHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
HSPTGARMGLLMERKRDGAGEISVYFEAGVTDDLKVMFTKYVHEHLLTKGKDTLRLRHFI
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
CPHCGHPVRDTELAHKKLEEDGHQAQIRCQNCDQKFVLWDLMEQKFADPEFQQKVRDLEA
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KAKSKIDHDSQELILKGHAFSVAQETGQTFRVLAQSNWGVDHEIEFKDWNGNPSGQRVYL
HHHHCCCCCCHHEEEECCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEE
QLKPRESFAYEHQEGQAVLIHASPDLCSYWQQQAYPVMLVLRDNSGDILWMNVTAACQDS
EEECCCCCCEECCCCCEEEEECCCHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCC
ERVRPNFDRSESTTSGPLEQTIIFQGEPFTALNLQRIRDQLLPPR
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
GWSTEVQPTSVQSSAAARYTNAKVVLVGESGVGKTGLALRLTQNRFEATISTDAHWATQ
CCCCCCCCCCCCHHHHHEECCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCEEEEE
LRLPHDNSPDGIDREIWLWDFAGQADYRLIHQLFMDETALAVLVFNPQSEDPFEGLSQWD
EECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHH
REITRAAQRPFKKLLVAGRCDRGRLMVSQSRIQQFAQNHSFVQYLETSALSGHGCQDLKT
HHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHH
AIIDEIDWDSIPHTSSPRIFKLLKDEILQLRDQGFVLFRISELKQQMEMRLPEEQFSLAQ
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCHHHHHHHH
LRAVVGLLAGPGIVWKLEFGDFVLLQPEWINKYAAAVIRSVREIGEIGIINEDKILRSDL
HHHHHHHHCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCC
NFTLDYRPTDNSAHEGNGTNSTPQQMDRLDAIQEDIILRAMHQTLVDRGICSRTSTPSGM
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ELIFPSYCKRELPEDPGHPPVLVTYRFKGFLEEIYATLVVRLRNTPVFENGDLWRFAADF
EEECHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
HSPTGARMGLLMERKRDGAGEISVYFEAGVTDDLKVMFTKYVHEHLLTKGKDTLRLRHFI
CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
CPHCGHPVRDTELAHKKLEEDGHQAQIRCQNCDQKFVLWDLMEQKFADPEFQQKVRDLEA
CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KAKSKIDHDSQELILKGHAFSVAQETGQTFRVLAQSNWGVDHEIEFKDWNGNPSGQRVYL
HHHHCCCCCCHHEEEECCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEE
QLKPRESFAYEHQEGQAVLIHASPDLCSYWQQQAYPVMLVLRDNSGDILWMNVTAACQDS
EEECCCCCCEECCCCCEEEEECCCHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCC
ERVRPNFDRSESTTSGPLEQTIIFQGEPFTALNLQRIRDQLLPPR
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA