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The map label for this gene is ompA [C]

Identifier: 158337857

GI number: 158337857

Start: 4779105

End: 4780646

Strand: Direct

Name: ompA [C]

Synonym: AM1_4743

Alternate gene names: 158337857

Gene position: 4779105-4780646 (Clockwise)

Preceding gene: 158337856

Following gene: 158337858

Centisome position: 73.48

GC content: 53.11

Gene sequence:

>1542_bases
ATGACCGTTAAAAGAAAAGGATTACCCCCCATCGCCTATATCGGTGCCGCATTACTCGTATTTGGAGGTGGGTATATGGG
CCTCAATGCCATCAATCTAGGAGCCCCTGCTCCCCTTAACCAACTCGCCTATGGCAATGAAGCCCGACAGCTTACGGTAC
TGGGCGATACCTTCTCCGGCTACAGCACCTTACGGGCCGACCCCTTCGCCGCCAAGATCACCCAAGCGGATCTAGGCATT
CGCTATCAGGATGAATTCGATCAAGCCGCTAGAGCCAAAGCCCTCGGCCAGAAGGCTGACATCATTGTCACCACTCTTGA
TCAGTATCTAAAGCACCAACCCCAAGGTCGCATCGTCGGCCTGATTGATAAAACCGTGGGTGCGGATGCCGTGGTGCTGA
ATACTCAGCAATACCTGGAGCTAAAGGGATTGAATGATATTGCCAAGGTGCGTGCCTCCGCTTCAGCTCCCCTAAAGTTG
GTTTACTCGGCAGGCACCCCCAGTGAATACCTCGCCAAGCTGCTGGATCTGAAGTTTGAAGGGTTGAGCTTGTCGGATTT
TGAAGTGGTGGAAGTGGAAGAGTCCACTCAGGCTTACGAGTTGTTAAAGTCTGATGCAGGAGTTGCGATCGCAATTCTCT
GGGAACCCTTCGTATCCAAAGCCCGCAAAGAAGGCAACACCGTCGTTCTCTCCAGCAGTGACGTTCCCGATGCCATTATT
GACGTGATTGTAGCCAGCAATCAGCTGATTCAAAACCGTCCCGAAGACCTCAGTCAATTCCTCACCCTCTATTACCAACA
TGCGGATCAGCTCATTCGCGACTCAAGTGCCCTCAGTCAGCAAATTGGTAAAGACGGCAATCTATCCACCCAGGATGCCA
CTTCAGTCTCTAAGGGCATCGACTTTTTCACCGCTCTGGAATCCCATCAGTGGATGAATGCTGGCACCTTAGCCAAGCGC
ATTGAAGCAACTTCAGCGGTTCTTTCCCTCACAGGTGAGACGGCAGGGCTGGTCCAGAATCCCCGTGCCCTCTATACCCA
AGACTTTATTGCCCAGGCCGTGACCAATTCTGAACAATTGGTGGCATCTATTGCCGCCACAGATCCTGAGTTGGCCAAAG
TACTCCGGGGGCAGAAGTCCTCAACAACCAAAGCCCAGGTCACTCCCCAGCAAATTCAATCAGCTCCGCAGGTGGGTAAC
TTCAAGGTCAGAGGTGAGGTGAAATTTGCAACAGGTTCTGCGGTGTTATCGGGAGATAGCCAATCCACTCTCAAGGCCCT
CGCTCAAGAAATCAACGAATTCAATCCCAGTACCATTGCCGTGAACGTGGTGGGACACACCTCAAAAACGGGGTCCGCTG
CCACGAATCAGACGTTGAGTCAGCAACGAGCCCAAGTGGTGGCTAATTTCCTCCGGTCTCAAGGAGTCCGCCCTAATCTG
GTGGCAGAGGGCAAAGGCTTCTCTGCTCAACTCCCAGGCGTTGACCCAGCCAGTCCTGCACAACAGCGCACTGAGATCCA
GCTCAGACGGGTAGGGGGATAG

Upstream 100 bases:

>100_bases
AGGGAACATCGAGAGCGATTAAAACCCTCCATGCCCAGGATCGCCTAGCCCAACTGAAGGCGAAGCTAGCCAACCCCACT
GTAGAAAATAAGGAGCAATC

Downstream 100 bases:

>100_bases
GGGGATGGCGGAGTCTTTGCGCCAAGCCTACCAGCGCTTTGGCGGTATCCAGCAGTCAGAGGTGCCTTGGATTATCTGGC
TCTTAGAAAATCCAGATAGT

Product: outer membrane protein A

Products: NA

Alternate protein names: Outer Membrane Protein A; OmpA/MotB Domain-Containing Protein; OmpA/MotB; OmpA Family Outer Membrane Protein

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MTVKRKGLPPIAYIGAALLVFGGGYMGLNAINLGAPAPLNQLAYGNEARQLTVLGDTFSGYSTLRADPFAAKITQADLGI
RYQDEFDQAARAKALGQKADIIVTTLDQYLKHQPQGRIVGLIDKTVGADAVVLNTQQYLELKGLNDIAKVRASASAPLKL
VYSAGTPSEYLAKLLDLKFEGLSLSDFEVVEVEESTQAYELLKSDAGVAIAILWEPFVSKARKEGNTVVLSSSDVPDAII
DVIVASNQLIQNRPEDLSQFLTLYYQHADQLIRDSSALSQQIGKDGNLSTQDATSVSKGIDFFTALESHQWMNAGTLAKR
IEATSAVLSLTGETAGLVQNPRALYTQDFIAQAVTNSEQLVASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQVGN
FKVRGEVKFATGSAVLSGDSQSTLKALAQEINEFNPSTIAVNVVGHTSKTGSAATNQTLSQQRAQVVANFLRSQGVRPNL
VAEGKGFSAQLPGVDPASPAQQRTEIQLRRVGG

Sequences:

>Translated_513_residues
MTVKRKGLPPIAYIGAALLVFGGGYMGLNAINLGAPAPLNQLAYGNEARQLTVLGDTFSGYSTLRADPFAAKITQADLGI
RYQDEFDQAARAKALGQKADIIVTTLDQYLKHQPQGRIVGLIDKTVGADAVVLNTQQYLELKGLNDIAKVRASASAPLKL
VYSAGTPSEYLAKLLDLKFEGLSLSDFEVVEVEESTQAYELLKSDAGVAIAILWEPFVSKARKEGNTVVLSSSDVPDAII
DVIVASNQLIQNRPEDLSQFLTLYYQHADQLIRDSSALSQQIGKDGNLSTQDATSVSKGIDFFTALESHQWMNAGTLAKR
IEATSAVLSLTGETAGLVQNPRALYTQDFIAQAVTNSEQLVASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQVGN
FKVRGEVKFATGSAVLSGDSQSTLKALAQEINEFNPSTIAVNVVGHTSKTGSAATNQTLSQQRAQVVANFLRSQGVRPNL
VAEGKGFSAQLPGVDPASPAQQRTEIQLRRVGG
>Mature_512_residues
TVKRKGLPPIAYIGAALLVFGGGYMGLNAINLGAPAPLNQLAYGNEARQLTVLGDTFSGYSTLRADPFAAKITQADLGIR
YQDEFDQAARAKALGQKADIIVTTLDQYLKHQPQGRIVGLIDKTVGADAVVLNTQQYLELKGLNDIAKVRASASAPLKLV
YSAGTPSEYLAKLLDLKFEGLSLSDFEVVEVEESTQAYELLKSDAGVAIAILWEPFVSKARKEGNTVVLSSSDVPDAIID
VIVASNQLIQNRPEDLSQFLTLYYQHADQLIRDSSALSQQIGKDGNLSTQDATSVSKGIDFFTALESHQWMNAGTLAKRI
EATSAVLSLTGETAGLVQNPRALYTQDFIAQAVTNSEQLVASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQVGNF
KVRGEVKFATGSAVLSGDSQSTLKALAQEINEFNPSTIAVNVVGHTSKTGSAATNQTLSQQRAQVVANFLRSQGVRPNLV
AEGKGFSAQLPGVDPASPAQQRTEIQLRRVGG

Specific function: Required For The Action Of Colicins K And L And For The Stabilization Of Mating Aggregates In Conjugation. Serves As A Receptor For A Number Of T-Even Like Phages. Also Acts As A Porin With Low Permeability That Allows Slow Penetration Of Small Solutes.

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54675; Mature: 54544

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVKRKGLPPIAYIGAALLVFGGGYMGLNAINLGAPAPLNQLAYGNEARQLTVLGDTFSG
CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHCCCCCCEEEEEECCCCC
YSTLRADPFAAKITQADLGIRYQDEFDQAARAKALGQKADIIVTTLDQYLKHQPQGRIVG
CHHHCCCCHHHHEEHHHCCCEEHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCEEE
LIDKTVGADAVVLNTQQYLELKGLNDIAKVRASASAPLKLVYSAGTPSEYLAKLLDLKFE
EEECCCCCCEEEECHHHHHEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCC
GLSLSDFEVVEVEESTQAYELLKSDAGVAIAILWEPFVSKARKEGNTVVLSSSDVPDAII
CCCCCCEEEEEECHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCEEEEECCCCCHHHH
DVIVASNQLIQNRPEDLSQFLTLYYQHADQLIRDSSALSQQIGKDGNLSTQDATSVSKGI
HHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
DFFTALESHQWMNAGTLAKRIEATSAVLSLTGETAGLVQNPRALYTQDFIAQAVTNSEQL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCHHCCCHHHHHHHHHHHHHCCHHHH
VASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQVGNFKVRGEVKFATGSAVLSGDS
HHHHHCCCHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEEEEEEEEECCCEEECCCC
QSTLKALAQEINEFNPSTIAVNVVGHTSKTGSAATNQTLSQQRAQVVANFLRSQGVRPNL
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
VAEGKGFSAQLPGVDPASPAQQRTEIQLRRVGG
EECCCCCEEECCCCCCCCCHHHHHHHHEEECCC
>Mature Secondary Structure 
TVKRKGLPPIAYIGAALLVFGGGYMGLNAINLGAPAPLNQLAYGNEARQLTVLGDTFSG
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHCCCCCCEEEEEECCCCC
YSTLRADPFAAKITQADLGIRYQDEFDQAARAKALGQKADIIVTTLDQYLKHQPQGRIVG
CHHHCCCCHHHHEEHHHCCCEEHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCEEE
LIDKTVGADAVVLNTQQYLELKGLNDIAKVRASASAPLKLVYSAGTPSEYLAKLLDLKFE
EEECCCCCCEEEECHHHHHEECCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCC
GLSLSDFEVVEVEESTQAYELLKSDAGVAIAILWEPFVSKARKEGNTVVLSSSDVPDAII
CCCCCCEEEEEECHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCEEEEECCCCCHHHH
DVIVASNQLIQNRPEDLSQFLTLYYQHADQLIRDSSALSQQIGKDGNLSTQDATSVSKGI
HHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
DFFTALESHQWMNAGTLAKRIEATSAVLSLTGETAGLVQNPRALYTQDFIAQAVTNSEQL
HHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCHHCCCHHHHHHHHHHHHHCCHHHH
VASIAATDPELAKVLRGQKSSTTKAQVTPQQIQSAPQVGNFKVRGEVKFATGSAVLSGDS
HHHHHCCCHHHHHHHCCCCCCCCEEEECHHHHHCCCCCCCEEEEEEEEEECCCEEECCCC
QSTLKALAQEINEFNPSTIAVNVVGHTSKTGSAATNQTLSQQRAQVVANFLRSQGVRPNL
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
VAEGKGFSAQLPGVDPASPAQQRTEIQLRRVGG
EECCCCCEEECCCCCCCCCHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA