| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337854
Identifier: 158337854
GI number: 158337854
Start: 4776751
End: 4777755
Strand: Reverse
Name: 158337854
Synonym: AM1_4740
Alternate gene names: NA
Gene position: 4777755-4776751 (Counterclockwise)
Preceding gene: 158337859
Following gene: 158337849
Centisome position: 73.46
GC content: 52.04
Gene sequence:
>1005_bases GTGCGCCGAATAATTGTGATTGGTCTACTCGTGGCGATGATGGTTGCTTGTCGGCCATCCCTGCGATCTACGACAACAGC ACCCGTAGACAGTCCCACCCTGGTGCAGCCTGCAACTGAGATGCTGAATTTGACGTTAATTCAGCATGCCTCCTGTCCTT GGGCTTATTTTTGGTGTGTGGTGGAAACGGGCATCCATGATGCTGCCCAGGATTTGGGGGTTGAAGTCACCATTCGTCGT CCCCACACCTTCGACCCTGATGCCGTGACCCAATTGATTGAGTCAGCCATCGATGGACCGACTCGACCCGATGCCATTGG GGTGGCCGTCATTGATCCAGAGCGATTCCGAGCGCCCCTAACCCGGGCGGTGCGGAAGTTCAATATTCCAGTGATTGCCT ACAATGCAGGGTCAGGGCCAGACCAAGACAATATTCCCTACCGAGCCTATATCGGACCGGATGAGCGACAAGGAGGATAT GAAGCTGGGAAGCGCTTGCTGGGCGAGTCTCCCCCTGCAGTAAAAGGAGCCTGTATTAATCACCAGCCCAGTGCTTTGAA TTTGGAGGCGCGTTGCCAAGGTTTTTTCGACGCTTTGAAGGAAGCTGGTTTGGCAGCTGAGCAGGTCAATATTACGCCTA ATCCAGCGGAATCCAAGAAAATTTTGCAGCGCTATCTTGCCCAAAAGCCTGAGGTCAATGTCTTTTTGACCCTTGGCCCG GAAGCAGCGGTCCCTTTTTATGAGGTCATCTCTAATCGAAAAGACACTTATCGACACGGCACCTTTGATCTCAGTCGGAC TATCCTGACCGCCATTGAGCAGGGAACGACGCTATTTGCCATTGATCAACAGCCCTATTTGGAAGGGTATTTAACGGTGC AATGGCTTACCTGGATTCAGCGCCACGGGTTTAGCCCTCCTAGCGAGATTATTTCCACTGGACCGAGTTTTATCGATCGC ACCAATATCGATCTCATTCAGCAGCAGGTAGGGGAATATAGATGA
Upstream 100 bases:
>100_bases TGCTGTTTCAGGAATTGAAATCTGCTTTTTCAGGTTTTTTCAGGTTGCGATTTTGAGCAGGATATAATTTCCTCTGTGCT GAAGTTCTGCTGAGGGTCCT
Downstream 100 bases:
>100_bases TCACTTGAGTGAAACGTGCATTTATGCTGCGGACCGGATAGGCGTTTGGGCAATTCTGGCATAAATGTAAATTGCTTTTT ATACTTTGCGTTTAGGTAGT
Product: sugar ABC transporter sugar-binding protein
Products: NA
Alternate protein names: ABC-Type Sugar Transport System; Twin-Arginine Translocation Pathway Signal; Sugar ABC Transporter Periplasmic Component-Like Protein; ABC-Type Sugar Transport System Periplasmic Component; ABC Transporter; Sugar ABC Transporter Periplasmic Protein; Lipoprotein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRRIIVIGLLVAMMVACRPSLRSTTTAPVDSPTLVQPATEMLNLTLIQHASCPWAYFWCVVETGIHDAAQDLGVEVTIRR PHTFDPDAVTQLIESAIDGPTRPDAIGVAVIDPERFRAPLTRAVRKFNIPVIAYNAGSGPDQDNIPYRAYIGPDERQGGY EAGKRLLGESPPAVKGACINHQPSALNLEARCQGFFDALKEAGLAAEQVNITPNPAESKKILQRYLAQKPEVNVFLTLGP EAAVPFYEVISNRKDTYRHGTFDLSRTILTAIEQGTTLFAIDQQPYLEGYLTVQWLTWIQRHGFSPPSEIISTGPSFIDR TNIDLIQQQVGEYR
Sequences:
>Translated_334_residues MRRIIVIGLLVAMMVACRPSLRSTTTAPVDSPTLVQPATEMLNLTLIQHASCPWAYFWCVVETGIHDAAQDLGVEVTIRR PHTFDPDAVTQLIESAIDGPTRPDAIGVAVIDPERFRAPLTRAVRKFNIPVIAYNAGSGPDQDNIPYRAYIGPDERQGGY EAGKRLLGESPPAVKGACINHQPSALNLEARCQGFFDALKEAGLAAEQVNITPNPAESKKILQRYLAQKPEVNVFLTLGP EAAVPFYEVISNRKDTYRHGTFDLSRTILTAIEQGTTLFAIDQQPYLEGYLTVQWLTWIQRHGFSPPSEIISTGPSFIDR TNIDLIQQQVGEYR >Mature_334_residues MRRIIVIGLLVAMMVACRPSLRSTTTAPVDSPTLVQPATEMLNLTLIQHASCPWAYFWCVVETGIHDAAQDLGVEVTIRR PHTFDPDAVTQLIESAIDGPTRPDAIGVAVIDPERFRAPLTRAVRKFNIPVIAYNAGSGPDQDNIPYRAYIGPDERQGGY EAGKRLLGESPPAVKGACINHQPSALNLEARCQGFFDALKEAGLAAEQVNITPNPAESKKILQRYLAQKPEVNVFLTLGP EAAVPFYEVISNRKDTYRHGTFDLSRTILTAIEQGTTLFAIDQQPYLEGYLTVQWLTWIQRHGFSPPSEIISTGPSFIDR TNIDLIQQQVGEYR
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36925; Mature: 36925
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRIIVIGLLVAMMVACRPSLRSTTTAPVDSPTLVQPATEMLNLTLIQHASCPWAYFWCV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH VETGIHDAAQDLGVEVTIRRPHTFDPDAVTQLIESAIDGPTRPDAIGVAVIDPERFRAPL HHHCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHH TRAVRKFNIPVIAYNAGSGPDQDNIPYRAYIGPDERQGGYEAGKRLLGESPPAVKGACIN HHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCC HQPSALNLEARCQGFFDALKEAGLAAEQVNITPNPAESKKILQRYLAQKPEVNVFLTLGP CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC EAAVPFYEVISNRKDTYRHGTFDLSRTILTAIEQGTTLFAIDQQPYLEGYLTVQWLTWIQ CCCCCHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH RHGFSPPSEIISTGPSFIDRTNIDLIQQQVGEYR HHCCCCHHHHHHCCCHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure MRRIIVIGLLVAMMVACRPSLRSTTTAPVDSPTLVQPATEMLNLTLIQHASCPWAYFWCV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH VETGIHDAAQDLGVEVTIRRPHTFDPDAVTQLIESAIDGPTRPDAIGVAVIDPERFRAPL HHHCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHH TRAVRKFNIPVIAYNAGSGPDQDNIPYRAYIGPDERQGGYEAGKRLLGESPPAVKGACIN HHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCC HQPSALNLEARCQGFFDALKEAGLAAEQVNITPNPAESKKILQRYLAQKPEVNVFLTLGP CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC EAAVPFYEVISNRKDTYRHGTFDLSRTILTAIEQGTTLFAIDQQPYLEGYLTVQWLTWIQ CCCCCHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH RHGFSPPSEIISTGPSFIDRTNIDLIQQQVGEYR HHCCCCHHHHHHCCCHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA