Click here to switch to the map view.

The map label for this gene is 158337837

Identifier: 158337837

GI number: 158337837

Start: 4748058

End: 4749350

Strand: Direct

Name: 158337837

Synonym: AM1_4723

Alternate gene names: NA

Gene position: 4748058-4749350 (Clockwise)

Preceding gene: 158337836

Following gene: 158337838

Centisome position: 73.01

GC content: 51.59

Gene sequence:

>1293_bases
TTGCTCGATCCCCGTGGGCAAGTTTTAGGCTGTGGCGGAGAACCTCTCGCGGACTACACCGGGTTTACGGTCGGTCTCTA
CAATATTGACCCCAATGATCCGACCCAATCGGAACTAGGGAGCTTAGTGTTGTTAACCCGCACTGAAGTTCCTGACATTC
CCAATAACGGTATTGCTCTGGGCATCACCCCCAATGGATCTAACATTAACCCATTCCCCCTCACCAATGCCGATCAAGGG
ACCTACAGCTATCTACTAGACCCCAACCGAGGACAGCTCGCCGTGGGTCAATCTTATATCTTGGTGGTTACGCCGCCGGA
TGCGTCCATTTACAACCAGCGTCGCGTTCGTCTAACCATTACCTCCATTATTCCGACGGGCAACCGCAACTTGGTGACCT
ATCGGGCTACTTCCCTCGATGGTTTGCCCATCGCCGCAGAAGGAGAGACCAACTTTGAAGAAACGGTAACCACGATTGGG
GATGCTGAGCGAATCTCGTTGCAACTACTGGCCTTAAACTTCTCTTCGACCCTGTGCCAGACCAATCAGATTCAAATTAG
TAAGTCTGGGGACCGAGCCAATGCCGCCCCTGGAGATTCGGTGATTTATCGTCTGACCCTACGTAACCTGTCCGATGGGC
AGTTAGACACCATTTCTGTACAAGATATTTTGCCGACGGGCTTTAAGCTGCTTCCCAACTCGGTTAGAGGGGCTCTGAAT
GGAACTGAGGTTCCGATTACGGTTGAGCAAAATGGTCAGAATCTAACCTTTAGGACCGACGCAGTTATTCCTTTAGAAGG
GGTCATCAACGTCGTCTATGCAGCACAACTTACCCCAGATGCTATTCGAGGCGATGGTAGAAACTCCGCCTCGGTTCTGG
GATTCCGAGTCGATAACAACCTGGATGTTCGGGATGGCCCTGCAGTCCACCGAGTGCGGGTAAACCCAGGCATCTTAACA
GACTGTGGCAATATTCTAGGCCGAGTCTTCGTCGATAAAAACTTCGATGGCGAGCAGCAAACGGGGGAACCTGGTATTCC
CAATGCTGTGGTCTGGATGGATGACGGCAATCGCATCACAACCGATGAGAATGGTTTATTCCATGTCAGATGTGTATTGC
CTGGACCTCGCACTGGTGCTCTGGATTTAACCACCTTGCCCGGTTACACCTTAGCCCCCAATCTCCACTTTATAGAAAGA
AATAGCCCTTCGCGTTTGGTCAGACTCTCTCCCGGTAGCACCGTACGCATGAACTTCGGTGTCACACCTACCTTCCAGGA
GGAGTCCAAATGA

Upstream 100 bases:

>100_bases
TCTTCTGAATAACACTGCTTCTTATTCCTACACCAACTCCAATACAAACACGCTGATTGAAAGCTTCACCAATCCGATTT
CAAATGTGTTGGATCCTTCG

Downstream 100 bases:

>100_bases
TGAAACAACGTTCTTACCAGTGGATGCAAACTGGACTCCTCGGAATTGTCGCAGGTACCAGCGTGGCTTTAGCCCCAAAT
CTGGTTAATGCCCAAGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Domain Protein; OmpA Family Outer Membrane Protein; Conserved Repeat Domain

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MLDPRGQVLGCGGEPLADYTGFTVGLYNIDPNDPTQSELGSLVLLTRTEVPDIPNNGIALGITPNGSNINPFPLTNADQG
TYSYLLDPNRGQLAVGQSYILVVTPPDASIYNQRRVRLTITSIIPTGNRNLVTYRATSLDGLPIAAEGETNFEETVTTIG
DAERISLQLLALNFSSTLCQTNQIQISKSGDRANAAPGDSVIYRLTLRNLSDGQLDTISVQDILPTGFKLLPNSVRGALN
GTEVPITVEQNGQNLTFRTDAVIPLEGVINVVYAAQLTPDAIRGDGRNSASVLGFRVDNNLDVRDGPAVHRVRVNPGILT
DCGNILGRVFVDKNFDGEQQTGEPGIPNAVVWMDDGNRITTDENGLFHVRCVLPGPRTGALDLTTLPGYTLAPNLHFIER
NSPSRLVRLSPGSTVRMNFGVTPTFQEESK

Sequences:

>Translated_430_residues
MLDPRGQVLGCGGEPLADYTGFTVGLYNIDPNDPTQSELGSLVLLTRTEVPDIPNNGIALGITPNGSNINPFPLTNADQG
TYSYLLDPNRGQLAVGQSYILVVTPPDASIYNQRRVRLTITSIIPTGNRNLVTYRATSLDGLPIAAEGETNFEETVTTIG
DAERISLQLLALNFSSTLCQTNQIQISKSGDRANAAPGDSVIYRLTLRNLSDGQLDTISVQDILPTGFKLLPNSVRGALN
GTEVPITVEQNGQNLTFRTDAVIPLEGVINVVYAAQLTPDAIRGDGRNSASVLGFRVDNNLDVRDGPAVHRVRVNPGILT
DCGNILGRVFVDKNFDGEQQTGEPGIPNAVVWMDDGNRITTDENGLFHVRCVLPGPRTGALDLTTLPGYTLAPNLHFIER
NSPSRLVRLSPGSTVRMNFGVTPTFQEESK
>Mature_430_residues
MLDPRGQVLGCGGEPLADYTGFTVGLYNIDPNDPTQSELGSLVLLTRTEVPDIPNNGIALGITPNGSNINPFPLTNADQG
TYSYLLDPNRGQLAVGQSYILVVTPPDASIYNQRRVRLTITSIIPTGNRNLVTYRATSLDGLPIAAEGETNFEETVTTIG
DAERISLQLLALNFSSTLCQTNQIQISKSGDRANAAPGDSVIYRLTLRNLSDGQLDTISVQDILPTGFKLLPNSVRGALN
GTEVPITVEQNGQNLTFRTDAVIPLEGVINVVYAAQLTPDAIRGDGRNSASVLGFRVDNNLDVRDGPAVHRVRVNPGILT
DCGNILGRVFVDKNFDGEQQTGEPGIPNAVVWMDDGNRITTDENGLFHVRCVLPGPRTGALDLTTLPGYTLAPNLHFIER
NSPSRLVRLSPGSTVRMNFGVTPTFQEESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46276; Mature: 46276

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPRGQVLGCGGEPLADYTGFTVGLYNIDPNDPTQSELGSLVLLTRTEVPDIPNNGIAL
CCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCCCEEE
GITPNGSNINPFPLTNADQGTYSYLLDPNRGQLAVGQSYILVVTPPDASIYNQRRVRLTI
EECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEEEECCCCCCCCCEEEEEEE
TSIIPTGNRNLVTYRATSLDGLPIAAEGETNFEETVTTIGDAERISLQLLALNFSSTLCQ
EEEECCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCCCEEEEEEEEEECCCHHCC
TNQIQISKSGDRANAAPGDSVIYRLTLRNLSDGQLDTISVQDILPTGFKLLPNSVRGALN
CCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCEECCHHHHCCCC
GTEVPITVEQNGQNLTFRTDAVIPLEGVINVVYAAQLTPDAIRGDGRNSASVLGFRVDNN
CCEEEEEECCCCCEEEEEECCEEEHHHHEEEEEEEECCCHHHCCCCCCCCEEEEEEECCC
LDVRDGPAVHRVRVNPGILTDCGNILGRVFVDKNFDGEQQTGEPGIPNAVVWMDDGNRIT
CCCCCCCCEEEEEECCCEEHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEE
TDENGLFHVRCVLPGPRTGALDLTTLPGYTLAPNLHFIERNSPSRLVRLSPGSTVRMNFG
ECCCCEEEEEEECCCCCCCEEEEEECCCEEECCCEEEEECCCCCEEEEECCCCEEEEECC
VTPTFQEESK
CCCCCCCCCC
>Mature Secondary Structure
MLDPRGQVLGCGGEPLADYTGFTVGLYNIDPNDPTQSELGSLVLLTRTEVPDIPNNGIAL
CCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHCCEEEEEECCCCCCCCCCEEE
GITPNGSNINPFPLTNADQGTYSYLLDPNRGQLAVGQSYILVVTPPDASIYNQRRVRLTI
EECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCEEEEEEECCCCCCCCCEEEEEEE
TSIIPTGNRNLVTYRATSLDGLPIAAEGETNFEETVTTIGDAERISLQLLALNFSSTLCQ
EEEECCCCCEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCCCEEEEEEEEEECCCHHCC
TNQIQISKSGDRANAAPGDSVIYRLTLRNLSDGQLDTISVQDILPTGFKLLPNSVRGALN
CCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCEECCHHHHCCCC
GTEVPITVEQNGQNLTFRTDAVIPLEGVINVVYAAQLTPDAIRGDGRNSASVLGFRVDNN
CCEEEEEECCCCCEEEEEECCEEEHHHHEEEEEEEECCCHHHCCCCCCCCEEEEEEECCC
LDVRDGPAVHRVRVNPGILTDCGNILGRVFVDKNFDGEQQTGEPGIPNAVVWMDDGNRIT
CCCCCCCCEEEEEECCCEEHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEE
TDENGLFHVRCVLPGPRTGALDLTTLPGYTLAPNLHFIERNSPSRLVRLSPGSTVRMNFG
ECCCCEEEEEEECCCCCCCEEEEEECCCEEECCCEEEEECCCCCEEEEECCCCEEEEECC
VTPTFQEESK
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA