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The map label for this gene is yafS [C]

Identifier: 158337797

GI number: 158337797

Start: 4714358

End: 4715056

Strand: Direct

Name: yafS [C]

Synonym: AM1_4682

Alternate gene names: 158337797

Gene position: 4714358-4715056 (Clockwise)

Preceding gene: 158337796

Following gene: 158337798

Centisome position: 72.49

GC content: 48.07

Gene sequence:

>699_bases
ATGGCTAATTCAGCACTGACGCTTCCCTATTTCGATCTGATTCTGAAACAACTCGACCAGGGCGACGCTATTTTTGAGCA
AGCTTTTGGTCGCCATGTTCATTGGGGCTATTGGGCCAATCCAGATCAGGCTACCTATACGGCCAAGGATTATGGGGCCG
CAGCAGAGCAAATGAGTGTTGAAATTTATTCTGCGGCTCAGGTACAAGACCATCAAACCATTTTGGATGTGGGGTGTGGT
GTAGGGGGCACCGTAGCCAGCTTGAATGAGCGTTTTACGAACGTCAGTTTATTGGGGCTGAATCTGGATGAACGTCAGCT
AGCCTATGCCCAACAAACAGTGACTGCTCGGCCAGAAAACACCATTGAGTTTGTCCAAGGGGATGCTTGTGCGCTGCCCT
TTGCCGATCAATCGGTAGATGCGGTGTTAGCGGTTGAGTGTATTTTTCACTTTCCAGATCGCAAGCAGTTTTTGCAGGAA
GCGTTGCGGGTGCTTAAACCAGGCGGTTGGTTGGCGATTTCTGATTTTGCACCGTTTGAAATGGAAGGATGGCCCGCTTT
TTTATGGCAGTCAAATCCTGTCTTGCCTAGTTTCTATGGATCGTTTGATGTCACCTACACCCTTCAAAAATATCGGATTT
TGTCTGGGCAGGTTGGCTTTGGGGCAATGCAGTCTAGTATTCCGTCAAAGATTTATTGA

Upstream 100 bases:

>100_bases
ATGAACGTTTTATCCCTGATCTTGTGATTGAAATTTGACCGCCATCAAAGGCGGTTTATATCATCCGCAGAAATTTTGCT
CTTTCCGATGAAATGAACCC

Downstream 100 bases:

>100_bases
TGGGTAAAGTCTGTGTAATTTGACCCTGGCATCTTGCGTCGTGAACCGCCAGTCAATCCATGTTCCCTTTTGGTTTCGGT
GCTCATTCCAAGCCCTCACA

Product: UbiE/COQ5 family methlytransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MANSALTLPYFDLILKQLDQGDAIFEQAFGRHVHWGYWANPDQATYTAKDYGAAAEQMSVEIYSAAQVQDHQTILDVGCG
VGGTVASLNERFTNVSLLGLNLDERQLAYAQQTVTARPENTIEFVQGDACALPFADQSVDAVLAVECIFHFPDRKQFLQE
ALRVLKPGGWLAISDFAPFEMEGWPAFLWQSNPVLPSFYGSFDVTYTLQKYRILSGQVGFGAMQSSIPSKIY

Sequences:

>Translated_232_residues
MANSALTLPYFDLILKQLDQGDAIFEQAFGRHVHWGYWANPDQATYTAKDYGAAAEQMSVEIYSAAQVQDHQTILDVGCG
VGGTVASLNERFTNVSLLGLNLDERQLAYAQQTVTARPENTIEFVQGDACALPFADQSVDAVLAVECIFHFPDRKQFLQE
ALRVLKPGGWLAISDFAPFEMEGWPAFLWQSNPVLPSFYGSFDVTYTLQKYRILSGQVGFGAMQSSIPSKIY
>Mature_231_residues
ANSALTLPYFDLILKQLDQGDAIFEQAFGRHVHWGYWANPDQATYTAKDYGAAAEQMSVEIYSAAQVQDHQTILDVGCGV
GGTVASLNERFTNVSLLGLNLDERQLAYAQQTVTARPENTIEFVQGDACALPFADQSVDAVLAVECIFHFPDRKQFLQEA
LRVLKPGGWLAISDFAPFEMEGWPAFLWQSNPVLPSFYGSFDVTYTLQKYRILSGQVGFGAMQSSIPSKIY

Specific function: Catalyzes the methylation of the lipid moiety of the intermediate compounds phthiotriol and glycosylated phenolphthiotriol dimycoserosates to form phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17561380, Length=103, Percent_Identity=32.0388349514563, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6323635, Length=129, Percent_Identity=31.7829457364341, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 25723; Mature: 25592

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSALTLPYFDLILKQLDQGDAIFEQAFGRHVHWGYWANPDQATYTAKDYGAAAEQMSV
CCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCCCCCEEEHHHHCCHHHHHEE
EIYSAAQVQDHQTILDVGCGVGGTVASLNERFTNVSLLGLNLDERQLAYAQQTVTARPEN
EEEEHHHHCCCHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCCCC
TIEFVQGDACALPFADQSVDAVLAVECIFHFPDRKQFLQEALRVLKPGGWLAISDFAPFE
CEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCC
MEGWPAFLWQSNPVLPSFYGSFDVTYTLQKYRILSGQVGFGAMQSSIPSKIY
CCCCEEEEECCCCCCCHHCCCEEEEEEEEEEEEECCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
ANSALTLPYFDLILKQLDQGDAIFEQAFGRHVHWGYWANPDQATYTAKDYGAAAEQMSV
CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEECCCCCCCCCCEEEHHHHCCHHHHHEE
EIYSAAQVQDHQTILDVGCGVGGTVASLNERFTNVSLLGLNLDERQLAYAQQTVTARPEN
EEEEHHHHCCCHHHHHHCCCCCCHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCCCC
TIEFVQGDACALPFADQSVDAVLAVECIFHFPDRKQFLQEALRVLKPGGWLAISDFAPFE
CEEEECCCEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCCCCC
MEGWPAFLWQSNPVLPSFYGSFDVTYTLQKYRILSGQVGFGAMQSSIPSKIY
CCCCEEEEECCCCCCCHHCCCEEEEEEEEEEEEECCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA