Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is ydjZ [C]

Identifier: 158337755

GI number: 158337755

Start: 4673017

End: 4673688

Strand: Direct

Name: ydjZ [C]

Synonym: AM1_4639

Alternate gene names: 158337755

Gene position: 4673017-4673688 (Clockwise)

Preceding gene: 158337754

Following gene: 158337756

Centisome position: 71.85

GC content: 44.05

Gene sequence:

>672_bases
ATGAATAAGAAGCTCAGCAAAATTAGTCTATTTGGGTTAGCTGTTGGCATCTTGGCCGTTTCTATCTGGCTGATCAGAAA
GCTAGATGAAGAACCCCTAAAATCCCAAATTGAACTTTACGTTGAGCAACTGGGACCTTGGGCACCTTTGGGAATCTTTG
TCCTTCGCTTGATCAGCGTTGTTATTCCTATCATCCCAGGTGTACCTCAGGCCTTACTTGCAGGGAAAATATTGGATTAC
CCCATTGCGTTAGGAACAATTGTTATTTCTGACCTTTGTTCCTGTAGCATCGCGTTTTATCTCGCCAGACGATTTGGTCG
AAACCTGGTCGAAAAACTAGTGGGTAAAAAGTTCATGGGCAGAGTGGATGAGTTGAGTGCCAAACACTTAGAGAAAAACT
TTTTCTTGTTAGCCGGTGCATTGATGACTGGAGCATTTGATTTTGTAAGCTACAGTGTGGGGCTAACAACCACCAAATGG
AAAATGTTTTTGCCAGGATTACTCATCGCTTCCCTTGTCCGAGGCGGACCGATTGTTGCCATAGGCGCAACTTTGTTTGA
TAAAGGAACTGGATATTTATATGCAGGCCTCTCGATCCTCGGTGCTTTTTGTGTGGCGATCTTAGCAGGGTGGCTCCAAC
AAAGAGGAGCTACTTCAGCGACTAAAAAATAA

Upstream 100 bases:

>100_bases
ACCTGCCCAGTATTTTGTCCGAAAGTTGCATACACTTAATATTAAGCAAAGCTTAAATGCCATCGTTTAAGCCTCTTAAA
AGACACTGTATTAACATTTC

Downstream 100 bases:

>100_bases
AAGTGCTGCCTCATGGGACTCAGGTCTTTACAAAACGGATGCCTGATAATCCGTCAGATCTATTGAAAGCTGATATTTCA
TGTGCTTGCTATCCCATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNKKLSKISLFGLAVGILAVSIWLIRKLDEEPLKSQIELYVEQLGPWAPLGIFVLRLISVVIPIIPGVPQALLAGKILDY
PIALGTIVISDLCSCSIAFYLARRFGRNLVEKLVGKKFMGRVDELSAKHLEKNFFLLAGALMTGAFDFVSYSVGLTTTKW
KMFLPGLLIASLVRGGPIVAIGATLFDKGTGYLYAGLSILGAFCVAILAGWLQQRGATSATKK

Sequences:

>Translated_223_residues
MNKKLSKISLFGLAVGILAVSIWLIRKLDEEPLKSQIELYVEQLGPWAPLGIFVLRLISVVIPIIPGVPQALLAGKILDY
PIALGTIVISDLCSCSIAFYLARRFGRNLVEKLVGKKFMGRVDELSAKHLEKNFFLLAGALMTGAFDFVSYSVGLTTTKW
KMFLPGLLIASLVRGGPIVAIGATLFDKGTGYLYAGLSILGAFCVAILAGWLQQRGATSATKK
>Mature_223_residues
MNKKLSKISLFGLAVGILAVSIWLIRKLDEEPLKSQIELYVEQLGPWAPLGIFVLRLISVVIPIIPGVPQALLAGKILDY
PIALGTIVISDLCSCSIAFYLARRFGRNLVEKLVGKKFMGRVDELSAKHLEKNFFLLAGALMTGAFDFVSYSVGLTTTKW
KMFLPGLLIASLVRGGPIVAIGATLFDKGTGYLYAGLSILGAFCVAILAGWLQQRGATSATKK

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24088; Mature: 24088

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLSKISLFGLAVGILAVSIWLIRKLDEEPLKSQIELYVEQLGPWAPLGIFVLRLISV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VIPIIPGVPQALLAGKILDYPIALGTIVISDLCSCSIAFYLARRFGRNLVEKLVGKKFMG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDELSAKHLEKNFFLLAGALMTGAFDFVSYSVGLTTTKWKMFLPGLLIASLVRGGPIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE
IGATLFDKGTGYLYAGLSILGAFCVAILAGWLQQRGATSATKK
EHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKKLSKISLFGLAVGILAVSIWLIRKLDEEPLKSQIELYVEQLGPWAPLGIFVLRLISV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VIPIIPGVPQALLAGKILDYPIALGTIVISDLCSCSIAFYLARRFGRNLVEKLVGKKFMG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDELSAKHLEKNFFLLAGALMTGAFDFVSYSVGLTTTKWKMFLPGLLIASLVRGGPIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE
IGATLFDKGTGYLYAGLSILGAFCVAILAGWLQQRGATSATKK
EHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA