| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337730
Identifier: 158337730
GI number: 158337730
Start: 4646802
End: 4647326
Strand: Reverse
Name: 158337730
Synonym: AM1_4614
Alternate gene names: NA
Gene position: 4647326-4646802 (Counterclockwise)
Preceding gene: 158337731
Following gene: 158337729
Centisome position: 71.46
GC content: 51.24
Gene sequence:
>525_bases ATGACTGCCTTTTCCCTGCAGCCCTTTGGCGACCCCCACCCCGATATCACGATTACCGGTACCTTAGAGCGAGAGGGGAA TCAACTTGCGATCGCATACACAGTCTCTGGCCATTTAGATCAGGTGATGATTCCCTCGCCGTCATTACCGACTCGCCAAT TTGATTTGTGGGAGGCGACCTGTCTGGAATTTTTTCTAGGGCAGCCTCACCAACCTCATTATTGGGAGTTTAATCTCTCC CCTGCGGGACATTGGAATGTCTTTCACCTGGAGGCTTACCGCCAAGGCTTACAGGAGGTTGAGGGGATCACAGAACTGCC GTTCCATGTCCATCACCAGCAGACCGCCCTCACATTATCTTTAACCTTTGATCTCAACCAGATAATGGTGGCTTCTCCGA CCTTAGGCGTGGGGATTTGTGCCGTGATTCAATCGCATGAGCAGTCCCTGACTTACTGGGCGTTATGTCATCCAGGATCT GAGGCTGATTTCCATCGACGGGATAGTTTTATACTCGGGCTCTAA
Upstream 100 bases:
>100_bases ATCCAGACCATAATCTCAACCGAGCTTTAGTCCAGTTCAAGCTGACAGAGAGTATCGAAACCCAATCCGAAGCGATTCAA GCCCTGATCCAATCTTTGCG
Downstream 100 bases:
>100_bases ACTGGTGTAGAACGCAGGTGGTGACGATTTCGCCCTGCGTAGAGTATTGATATCTACAGAGGATTTTCTCCTTTTAGGTA GTAAGGACCCAAACTTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MTAFSLQPFGDPHPDITITGTLEREGNQLAIAYTVSGHLDQVMIPSPSLPTRQFDLWEATCLEFFLGQPHQPHYWEFNLS PAGHWNVFHLEAYRQGLQEVEGITELPFHVHHQQTALTLSLTFDLNQIMVASPTLGVGICAVIQSHEQSLTYWALCHPGS EADFHRRDSFILGL
Sequences:
>Translated_174_residues MTAFSLQPFGDPHPDITITGTLEREGNQLAIAYTVSGHLDQVMIPSPSLPTRQFDLWEATCLEFFLGQPHQPHYWEFNLS PAGHWNVFHLEAYRQGLQEVEGITELPFHVHHQQTALTLSLTFDLNQIMVASPTLGVGICAVIQSHEQSLTYWALCHPGS EADFHRRDSFILGL >Mature_173_residues TAFSLQPFGDPHPDITITGTLEREGNQLAIAYTVSGHLDQVMIPSPSLPTRQFDLWEATCLEFFLGQPHQPHYWEFNLSP AGHWNVFHLEAYRQGLQEVEGITELPFHVHHQQTALTLSLTFDLNQIMVASPTLGVGICAVIQSHEQSLTYWALCHPGSE ADFHRRDSFILGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19604; Mature: 19473
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFSLQPFGDPHPDITITGTLEREGNQLAIAYTVSGHLDQVMIPSPSLPTRQFDLWEAT CCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHH CLEFFLGQPHQPHYWEFNLSPAGHWNVFHLEAYRQGLQEVEGITELPFHVHHQQTALTLS HHHHHHCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHCCHHCCCEEEECCCEEEEEE LTFDLNQIMVASPTLGVGICAVIQSHEQSLTYWALCHPGSEADFHRRDSFILGL EEECCCEEEEECCCCCHHHHEEHHCCCCCEEEEEEECCCCCCCCCCCCEEEECC >Mature Secondary Structure TAFSLQPFGDPHPDITITGTLEREGNQLAIAYTVSGHLDQVMIPSPSLPTRQFDLWEAT CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCCCCCHHHHHH CLEFFLGQPHQPHYWEFNLSPAGHWNVFHLEAYRQGLQEVEGITELPFHVHHQQTALTLS HHHHHHCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHCCHHCCCEEEECCCEEEEEE LTFDLNQIMVASPTLGVGICAVIQSHEQSLTYWALCHPGSEADFHRRDSFILGL EEECCCEEEEECCCCCHHHHEEHHCCCCCEEEEEEECCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA