| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337681
Identifier: 158337681
GI number: 158337681
Start: 4598857
End: 4601160
Strand: Direct
Name: 158337681
Synonym: AM1_4565
Alternate gene names: NA
Gene position: 4598857-4601160 (Clockwise)
Preceding gene: 158337680
Following gene: 158337684
Centisome position: 70.71
GC content: 47.96
Gene sequence:
>2304_bases ATGGCACTGACCCGACGCGCTTTATTGCGAAAAACTAGCTTAGTGCTAGCTGGCCTAGGTTTAAGTGATTTATCTCTATG GAAGTTTGCAAATCAATATCAACAGGTATTAGCGCAACCCACTTCCCGGAAGCTAGCCTTGCTGGTGGGCATTAATCAGT ATCGAGATTTGGGTAAGCAAGCTAAGCTGAAGGGCTGTTTGACCGATTTAGAATTGCAGCGAGAGCTTTTAGTCCATCGG TTTGGTTTTCACCCCGATGATATTGTCATTCTCAAAAACAAACAGGCTACCTATAAAAATATTGAAACGGCGTTTACCAC CCATTTAATTGAACAGTCTCGGCCTCAAGATTGTGTCATCTTTCATTTCAGTGGGTATGGATGCTTATTGAGCCCCTATG TCGACACAGCCTCAGAGGTAAAAACGCCTCTCCCGTCCCAAGTGTTGCTTCCTTTCGATAGCAATATTCAATCGTCTGAC AATAGCCAACAAGCCCTTGAAAATGTTCTGTTGCAAGAGCAGTTAGCCCTTTGGTTTAGGTCTCTCAATACCCAACAAAG TCTCTGTGTGTTGGATGCGGGTTTCACCTATCCCGGCAAGGCCTTGTTGGGGAATTTGCGGGTGCGATCGCAACCTAGTA TTCAGCAAAAAACAGATTTGCCGGACGATCGAGAGCAGCAAGAAAAATTACTCAACCAATCCCAGCGACGTCAATCCCCC TCTGAGCTCATTCTTTGGGCCTCTCAGCAAGCTCAAACGGCCGTTGAAGCTCAATGGCATGACTTCTCGTCAGGGCTATT CACCTATGCCTTAACCGAACATCTATGGCAATCCTCTCCCACTCAAAAATTTTCAGCCAGCTTTAATCGGATCGTGTCTG ATGTTGAGCGTCAGGTTGGTCGAGTCCAACAGCCTAGCTTAAGTGGGCAGTCAGGCTCCAGTGTTTTGGCAGGGTTAGCT CTCGGGGCCAATGCCGATGGTGTGGTTACTGATGTTGAAGACAACGGGGAAGAAGTTACGGTTTGGCTTGGGGGCGTTTT ACCCCAAATTGTGGAGTATTACGCAACCACGACTTGCTTTAAAGTCACATCGAAGGAAGGCAGCCTATCTAGTAGCCCAG CTGTCGCTGCTTCATCTGCTGGAAGCGAATCCGATCCTAACCCAGTTCCACAAGAACCCTTGATTCAATTGGAGTCTAGC CGAGGCTGTGTCGGGACTGGACGGTGTGAGCAAGAAGGCCAAATTAACTCAGGCCAGAAAATTCGAGAGGCCTTTCGAGT TATCTCCCGCTCCATCAATTTAAATGTTGCCCTAGGGTCACAACTGAATCGGATTGAACGGGTAGATGCCACTAGTGCAT TTTCCGACATGCCCAATATCAATCCCGTTATTGCTGGTACTCAAAACGCGGACTTTTTGTTTACCCAAGCCTCTTCTTCC TCTCAAGTGATTGTTAATTCCGTACCGACGGACCTATCGGAAGAAGAAGAAGACCCTCCGGCTCCACCCCCCCAAACCCA ATATGGACTCTTTTCCCAAGGTGGTGAGGAATTAGCAGATACCCGAGGAGAATCGGGGGAGGCCATTAAAACGGCGGTTA ATCAACTACACGATACGTTGAAATTACTGCTGGCCCGCAAAACCCTCGATCTGACGGTTAACGATTTTTCGTCGAGAGTG GGGGCCATGGTGACTTTGGAATCTACCGATGATGAAAAGCCCCAGATCCTAGCCCAACAGTCTACGACCAGAGCGCCTTG GCTTCGAAAAGAAAACTCATCCTTATCTTCCTTTGAGAAGCAAGGGCAAGTTGTTCAGATTGCCAAAGGTCAACATATCC AATATCGGGTGTATAACTACAGTGATGCTCCTCTCTATTGGTTAGTATTGGGCGTTGATACTCGCACCCAATTCTTCTCA ATTTATGCGCCGGAAGCGCTGCTAGATACGTCAACCAACCAAGACGCTATTGCCCCTAAAGACTCGCTCACAGTGCCATT CCCAACGAATGAATATGTCGTTCGTGGACCAGAAGGGATCGCAACAACCTACATCATTCTGAGCCGCACTCCGTTTGAGA AAGGATTAGAGGCCATCTCCAGCAAAATCCGCCCGTCTTCTAGTAATACATCTCCTGTCGTAGCCCGCTTGGTCAATCCA CTAGAGGTGACCCAGCAAGTACTACAAGATTTGCATAACAGCAGCGTGCCAACAGCAGAGAAAATGGGGATTGCATCTGA TAGTAACTGGGTTTGGGATGTCGAGCAGTGGGCAACGTTTCAGTTTACCCATGAGGTGATTTGA
Upstream 100 bases:
>100_bases GCTTTCGCAATCGGCGATATAGTGAAAACAGGAACCCATTATCTAGTAGTGGGTTCTACCCTTTTGCCCATCCGTAGGCC CTCTCCATAGACATCACATC
Downstream 100 bases:
>100_bases AAGCATGAGGAGTATGAGTGGTGAGGCCAGCTCACCGATTTTTTAAAGCAACTGGCCAGCAAGTTTAAAGAACAGCTTTA GCAGAAAAGAGTCCTTTTTC
Product: protease (caspase) p20 domain-containing protein
Products: NA
Alternate protein names: Caspase Domain Protein; ICE-Like Protease; C14 Family Peptidase; Caspase Domain-Containing Protein; Protease
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MALTRRALLRKTSLVLAGLGLSDLSLWKFANQYQQVLAQPTSRKLALLVGINQYRDLGKQAKLKGCLTDLELQRELLVHR FGFHPDDIVILKNKQATYKNIETAFTTHLIEQSRPQDCVIFHFSGYGCLLSPYVDTASEVKTPLPSQVLLPFDSNIQSSD NSQQALENVLLQEQLALWFRSLNTQQSLCVLDAGFTYPGKALLGNLRVRSQPSIQQKTDLPDDREQQEKLLNQSQRRQSP SELILWASQQAQTAVEAQWHDFSSGLFTYALTEHLWQSSPTQKFSASFNRIVSDVERQVGRVQQPSLSGQSGSSVLAGLA LGANADGVVTDVEDNGEEVTVWLGGVLPQIVEYYATTTCFKVTSKEGSLSSSPAVAASSAGSESDPNPVPQEPLIQLESS RGCVGTGRCEQEGQINSGQKIREAFRVISRSINLNVALGSQLNRIERVDATSAFSDMPNINPVIAGTQNADFLFTQASSS SQVIVNSVPTDLSEEEEDPPAPPPQTQYGLFSQGGEELADTRGESGEAIKTAVNQLHDTLKLLLARKTLDLTVNDFSSRV GAMVTLESTDDEKPQILAQQSTTRAPWLRKENSSLSSFEKQGQVVQIAKGQHIQYRVYNYSDAPLYWLVLGVDTRTQFFS IYAPEALLDTSTNQDAIAPKDSLTVPFPTNEYVVRGPEGIATTYIILSRTPFEKGLEAISSKIRPSSSNTSPVVARLVNP LEVTQQVLQDLHNSSVPTAEKMGIASDSNWVWDVEQWATFQFTHEVI
Sequences:
>Translated_767_residues MALTRRALLRKTSLVLAGLGLSDLSLWKFANQYQQVLAQPTSRKLALLVGINQYRDLGKQAKLKGCLTDLELQRELLVHR FGFHPDDIVILKNKQATYKNIETAFTTHLIEQSRPQDCVIFHFSGYGCLLSPYVDTASEVKTPLPSQVLLPFDSNIQSSD NSQQALENVLLQEQLALWFRSLNTQQSLCVLDAGFTYPGKALLGNLRVRSQPSIQQKTDLPDDREQQEKLLNQSQRRQSP SELILWASQQAQTAVEAQWHDFSSGLFTYALTEHLWQSSPTQKFSASFNRIVSDVERQVGRVQQPSLSGQSGSSVLAGLA LGANADGVVTDVEDNGEEVTVWLGGVLPQIVEYYATTTCFKVTSKEGSLSSSPAVAASSAGSESDPNPVPQEPLIQLESS RGCVGTGRCEQEGQINSGQKIREAFRVISRSINLNVALGSQLNRIERVDATSAFSDMPNINPVIAGTQNADFLFTQASSS SQVIVNSVPTDLSEEEEDPPAPPPQTQYGLFSQGGEELADTRGESGEAIKTAVNQLHDTLKLLLARKTLDLTVNDFSSRV GAMVTLESTDDEKPQILAQQSTTRAPWLRKENSSLSSFEKQGQVVQIAKGQHIQYRVYNYSDAPLYWLVLGVDTRTQFFS IYAPEALLDTSTNQDAIAPKDSLTVPFPTNEYVVRGPEGIATTYIILSRTPFEKGLEAISSKIRPSSSNTSPVVARLVNP LEVTQQVLQDLHNSSVPTAEKMGIASDSNWVWDVEQWATFQFTHEVI >Mature_766_residues ALTRRALLRKTSLVLAGLGLSDLSLWKFANQYQQVLAQPTSRKLALLVGINQYRDLGKQAKLKGCLTDLELQRELLVHRF GFHPDDIVILKNKQATYKNIETAFTTHLIEQSRPQDCVIFHFSGYGCLLSPYVDTASEVKTPLPSQVLLPFDSNIQSSDN SQQALENVLLQEQLALWFRSLNTQQSLCVLDAGFTYPGKALLGNLRVRSQPSIQQKTDLPDDREQQEKLLNQSQRRQSPS ELILWASQQAQTAVEAQWHDFSSGLFTYALTEHLWQSSPTQKFSASFNRIVSDVERQVGRVQQPSLSGQSGSSVLAGLAL GANADGVVTDVEDNGEEVTVWLGGVLPQIVEYYATTTCFKVTSKEGSLSSSPAVAASSAGSESDPNPVPQEPLIQLESSR GCVGTGRCEQEGQINSGQKIREAFRVISRSINLNVALGSQLNRIERVDATSAFSDMPNINPVIAGTQNADFLFTQASSSS QVIVNSVPTDLSEEEEDPPAPPPQTQYGLFSQGGEELADTRGESGEAIKTAVNQLHDTLKLLLARKTLDLTVNDFSSRVG AMVTLESTDDEKPQILAQQSTTRAPWLRKENSSLSSFEKQGQVVQIAKGQHIQYRVYNYSDAPLYWLVLGVDTRTQFFSI YAPEALLDTSTNQDAIAPKDSLTVPFPTNEYVVRGPEGIATTYIILSRTPFEKGLEAISSKIRPSSSNTSPVVARLVNPL EVTQQVLQDLHNSSVPTAEKMGIASDSNWVWDVEQWATFQFTHEVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84413; Mature: 84282
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTRRALLRKTSLVLAGLGLSDLSLWKFANQYQQVLAQPTSRKLALLVGINQYRDLGKQ CCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHH AKLKGCLTDLELQRELLVHRFGFHPDDIVILKNKQATYKNIETAFTTHLIEQSRPQDCVI HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEE FHFSGYGCLLSPYVDTASEVKTPLPSQVLLPFDSNIQSSDNSQQALENVLLQEQLALWFR EEECCCCEEECCHHCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLNTQQSLCVLDAGFTYPGKALLGNLRVRSQPSIQQKTDLPDDREQQEKLLNQSQRRQSP HCCCCCCEEEEECCCCCCCHHHHCCCEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC SELILWASQQAQTAVEAQWHDFSSGLFTYALTEHLWQSSPTQKFSASFNRIVSDVERQVG CCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC RVQQPSLSGQSGSSVLAGLALGANADGVVTDVEDNGEEVTVWLGGVLPQIVEYYATTTCF CCCCCCCCCCCCCHHHHHHEECCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHEE KVTSKEGSLSSSPAVAASSAGSESDPNPVPQEPLIQLESSRGCVGTGRCEQEGQINSGQK EEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCCCCCCCCHH IREAFRVISRSINLNVALGSQLNRIERVDATSAFSDMPNINPVIAGTQNADFLFTQASSS HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCC SQVIVNSVPTDLSEEEEDPPAPPPQTQYGLFSQGGEELADTRGESGEAIKTAVNQLHDTL CEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHH KLLLARKTLDLTVNDFSSRVGAMVTLESTDDEKPQILAQQSTTRAPWLRKENSSLSSFEK HHHHHHHHHEEEEHHHHHCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHH QGQVVQIAKGQHIQYRVYNYSDAPLYWLVLGVDTRTQFFSIYAPEALLDTSTNQDAIAPK CCCEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCHHHHCCCCCCCCCCCC DSLTVPFPTNEYVVRGPEGIATTYIILSRTPFEKGLEAISSKIRPSSSNTSPVVARLVNP CCEEECCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCH LEVTQQVLQDLHNSSVPTAEKMGIASDSNWVWDVEQWATFQFTHEVI HHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEHHHCEEEEEECCCC >Mature Secondary Structure ALTRRALLRKTSLVLAGLGLSDLSLWKFANQYQQVLAQPTSRKLALLVGINQYRDLGKQ CCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCHH AKLKGCLTDLELQRELLVHRFGFHPDDIVILKNKQATYKNIETAFTTHLIEQSRPQDCVI HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEE FHFSGYGCLLSPYVDTASEVKTPLPSQVLLPFDSNIQSSDNSQQALENVLLQEQLALWFR EEECCCCEEECCHHCCHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLNTQQSLCVLDAGFTYPGKALLGNLRVRSQPSIQQKTDLPDDREQQEKLLNQSQRRQSP HCCCCCCEEEEECCCCCCCHHHHCCCEECCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC SELILWASQQAQTAVEAQWHDFSSGLFTYALTEHLWQSSPTQKFSASFNRIVSDVERQVG CCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC RVQQPSLSGQSGSSVLAGLALGANADGVVTDVEDNGEEVTVWLGGVLPQIVEYYATTTCF CCCCCCCCCCCCCHHHHHHEECCCCCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHEE KVTSKEGSLSSSPAVAASSAGSESDPNPVPQEPLIQLESSRGCVGTGRCEQEGQINSGQK EEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHEEECCCCCEECCCCCCCCCCCCCHH IREAFRVISRSINLNVALGSQLNRIERVDATSAFSDMPNINPVIAGTQNADFLFTQASSS HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCC SQVIVNSVPTDLSEEEEDPPAPPPQTQYGLFSQGGEELADTRGESGEAIKTAVNQLHDTL CEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHH KLLLARKTLDLTVNDFSSRVGAMVTLESTDDEKPQILAQQSTTRAPWLRKENSSLSSFEK HHHHHHHHHEEEEHHHHHCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHH QGQVVQIAKGQHIQYRVYNYSDAPLYWLVLGVDTRTQFFSIYAPEALLDTSTNQDAIAPK CCCEEEEECCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEECCHHHHCCCCCCCCCCCC DSLTVPFPTNEYVVRGPEGIATTYIILSRTPFEKGLEAISSKIRPSSSNTSPVVARLVNP CCEEECCCCCCEEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCH LEVTQQVLQDLHNSSVPTAEKMGIASDSNWVWDVEQWATFQFTHEVI HHHHHHHHHHHHCCCCCCHHHCCCCCCCCEEEEHHHCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA