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The map label for this gene is 158337662

Identifier: 158337662

GI number: 158337662

Start: 4579649

End: 4581664

Strand: Reverse

Name: 158337662

Synonym: AM1_4544

Alternate gene names: NA

Gene position: 4581664-4579649 (Counterclockwise)

Preceding gene: 158337663

Following gene: 158337660

Centisome position: 70.45

GC content: 47.57

Gene sequence:

>2016_bases
ATGCAGATTATTGATAATCCGACCGTTGAGAACGGCGAGTCAGTTGACGTAAGCGGCAGCGTTATTTTTGATGACGCCAC
CTATGCTTTTCAAGAAGTTTCAGAGGCCGAGACCCGTCAACTGCTGAGTACCGATACCTCTGTTACGTTTGCAGGTATCC
AGCGGGGAGAAACATTTAAGATTCTGCTGCTTACGGATCGCTATGCCCCTAGTAATTTAGTCACACTCCGCAATGGGATT
GATGGCTGGACTAAGGATATTTATGGTGTGTATTCCTTTGGAGCCTGGATTTTTGAGTTGGAGCGTTCCAGCCACCCTGT
TAGCTTAAGTTTTAAGTTTTTCCTTAATGGCCAATATTGGATGGACGGTCATGATCTCACGGTTAATAACAGTGGTGAGC
ATCGCTTCACCGATGATCCCATTACGCATCCCAATGCGGGAGTGATTCATTTTTCCTCAGATGCTGAACTACACTTTCTC
CATAGTTATGACAACCTACGCACCCACGAAAGCCTCCAGCAGCAGCGGCGATTCCCTGGTAACCGTCAATCGATCAAAGA
ATATGACGTGATTGTGATTGGCTCGGGAATGGGGGGTGGCATTGTGGCGGATGCCGTTTCGGATGCAGGGTTAGATACCC
TTGTGCTTGAAATTGGCGGACTACAATCCCCAACCCATGTGGGTAATGCCTATGCTGATTGGGATGAGATTGTCTCTGAG
CATCAAGTGGGACACTACGATCGCAAGGATAATACCAACTTCCTCTTTGGGGCCCAGATGGCCCTTGGAGGGCGCTCACT
GTATTGGTCCGGCATTATCTTGCGGATGCAGGAATGGGAATATAACTATTGGCCAACTGCCATTCGCAATTTTTTGCGGG
ATGAACAACAGGGGGGGAGTGACGGATATATCCGAGCAGAAACCCTTATGCGTAAACGTAAAACGCTGGGCAACTTTCAA
GATCGTGTTGTTACTCATCTAAAGCAGAAGCTTCCTGATATGAACATTACAGACTTGCCGCGATCTCGACACCAGCCAAA
TCTCAATGCGCAAGAGATGACCAATAGCGTTCTGTTTGCATCAACAGGGGTTTTTTCAACAGCAGATTTACTATCTGACT
CGAAAGCATTTGTGGCAGATGTGGGCTCTCGCAACCTAACTGTAAATCTCAACCACCTAGTCACCCATATCCGTCCTGAT
CCCAATAATCCTGGGCGTGTCAGTGAGGTCGTTTGCCAAGACCTTGTTGGCCATCAGGAACGAATCTATCGTGGCAAGGT
GATTGTCTTGGCCGCTGGATCGATTGAAAGTCCTAAAATCTTTTTGCAAAGCAATCTTAACGATCAGTCTGGTAAGGCTG
GTGTAGGGTTAACTGATCATCCCTATCTGTTCTCTAGTAACTATCTGATACCTGAGAGCAATTCTTTTGCAGGAGATTTA
AATCATGCCAAGGTCCTGCTATGGGCCGGAGATGCACGAGCAGATCACTATCCGTTCTATGCTGAGCTGTTGATCAACCC
TTGGTATTGGCACGTGCGCCGAGCAGATGATGATCTCTGGCAGCGTCAACCGCCAGAAAACCGCCGGACTGAAATCACGA
TGAAGTTCGGCTTTTCTAAGGAGCTCATAGACAGTAATAGCGTCGAATCCCAAGGGCCAAGTCAAAAGGCAGCAATTCGG
GTGGCAAACCTAACACTGAGCGATACATTCATTGACCAAGCTCGTCAGTTCCGCAACCGGATTCTCACAGCTTTAGAGAT
TCCTCATAATCCCAATGAGGGCATGGGAGTTGCTGCCCATGGCGGCACGGTAAATCACGCAGGCGGCACTTTAAGGATCA
GTGCCGATCCAACCCAAGGGGTAGTGGATGAGAATCTCAAAAGTCATAGCTATGACAATCTTTATATTGCAGATGTCTCA
GTTTTTCCCTATATTCCCACTGCCAATCCATCCCTAACATTGGGAGCATTAGCACTACGACTTAGCGATCACATTAAAAA
TCGCCTAGCCAATTAA

Upstream 100 bases:

>100_bases
CTTGGTGGCATTAAGTTTTGCGAAAAGTAGCATAACGGGTTCTGCAATCTTAGAAATCTAGAAAGTCAAGATAGACCGGA
CAGTATTTCTGGAGCCCACC

Downstream 100 bases:

>100_bases
TCCCGAATACTTTTGCTTTCCAGCAATTCGAGTTTTTGAGCAACACCAAACCCTGAGAAAGTCTATGGTAATCGCTCATT
CTTTACTCGCATTTAGAGGG

Product: dehydrogenase

Products: NA

Alternate protein names: Flavoprotein Related Choline Dehydrogenase; Choline Dehydrogenase; FAD Dependent Oxidoreductase; Dehydrogenase; GMC Oxidoreductase; Dehydrogenase Subunit-Like Protein; GMC Oxidoreductase Family

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MQIIDNPTVENGESVDVSGSVIFDDATYAFQEVSEAETRQLLSTDTSVTFAGIQRGETFKILLLTDRYAPSNLVTLRNGI
DGWTKDIYGVYSFGAWIFELERSSHPVSLSFKFFLNGQYWMDGHDLTVNNSGEHRFTDDPITHPNAGVIHFSSDAELHFL
HSYDNLRTHESLQQQRRFPGNRQSIKEYDVIVIGSGMGGGIVADAVSDAGLDTLVLEIGGLQSPTHVGNAYADWDEIVSE
HQVGHYDRKDNTNFLFGAQMALGGRSLYWSGIILRMQEWEYNYWPTAIRNFLRDEQQGGSDGYIRAETLMRKRKTLGNFQ
DRVVTHLKQKLPDMNITDLPRSRHQPNLNAQEMTNSVLFASTGVFSTADLLSDSKAFVADVGSRNLTVNLNHLVTHIRPD
PNNPGRVSEVVCQDLVGHQERIYRGKVIVLAAGSIESPKIFLQSNLNDQSGKAGVGLTDHPYLFSSNYLIPESNSFAGDL
NHAKVLLWAGDARADHYPFYAELLINPWYWHVRRADDDLWQRQPPENRRTEITMKFGFSKELIDSNSVESQGPSQKAAIR
VANLTLSDTFIDQARQFRNRILTALEIPHNPNEGMGVAAHGGTVNHAGGTLRISADPTQGVVDENLKSHSYDNLYIADVS
VFPYIPTANPSLTLGALALRLSDHIKNRLAN

Sequences:

>Translated_671_residues
MQIIDNPTVENGESVDVSGSVIFDDATYAFQEVSEAETRQLLSTDTSVTFAGIQRGETFKILLLTDRYAPSNLVTLRNGI
DGWTKDIYGVYSFGAWIFELERSSHPVSLSFKFFLNGQYWMDGHDLTVNNSGEHRFTDDPITHPNAGVIHFSSDAELHFL
HSYDNLRTHESLQQQRRFPGNRQSIKEYDVIVIGSGMGGGIVADAVSDAGLDTLVLEIGGLQSPTHVGNAYADWDEIVSE
HQVGHYDRKDNTNFLFGAQMALGGRSLYWSGIILRMQEWEYNYWPTAIRNFLRDEQQGGSDGYIRAETLMRKRKTLGNFQ
DRVVTHLKQKLPDMNITDLPRSRHQPNLNAQEMTNSVLFASTGVFSTADLLSDSKAFVADVGSRNLTVNLNHLVTHIRPD
PNNPGRVSEVVCQDLVGHQERIYRGKVIVLAAGSIESPKIFLQSNLNDQSGKAGVGLTDHPYLFSSNYLIPESNSFAGDL
NHAKVLLWAGDARADHYPFYAELLINPWYWHVRRADDDLWQRQPPENRRTEITMKFGFSKELIDSNSVESQGPSQKAAIR
VANLTLSDTFIDQARQFRNRILTALEIPHNPNEGMGVAAHGGTVNHAGGTLRISADPTQGVVDENLKSHSYDNLYIADVS
VFPYIPTANPSLTLGALALRLSDHIKNRLAN
>Mature_671_residues
MQIIDNPTVENGESVDVSGSVIFDDATYAFQEVSEAETRQLLSTDTSVTFAGIQRGETFKILLLTDRYAPSNLVTLRNGI
DGWTKDIYGVYSFGAWIFELERSSHPVSLSFKFFLNGQYWMDGHDLTVNNSGEHRFTDDPITHPNAGVIHFSSDAELHFL
HSYDNLRTHESLQQQRRFPGNRQSIKEYDVIVIGSGMGGGIVADAVSDAGLDTLVLEIGGLQSPTHVGNAYADWDEIVSE
HQVGHYDRKDNTNFLFGAQMALGGRSLYWSGIILRMQEWEYNYWPTAIRNFLRDEQQGGSDGYIRAETLMRKRKTLGNFQ
DRVVTHLKQKLPDMNITDLPRSRHQPNLNAQEMTNSVLFASTGVFSTADLLSDSKAFVADVGSRNLTVNLNHLVTHIRPD
PNNPGRVSEVVCQDLVGHQERIYRGKVIVLAAGSIESPKIFLQSNLNDQSGKAGVGLTDHPYLFSSNYLIPESNSFAGDL
NHAKVLLWAGDARADHYPFYAELLINPWYWHVRRADDDLWQRQPPENRRTEITMKFGFSKELIDSNSVESQGPSQKAAIR
VANLTLSDTFIDQARQFRNRILTALEIPHNPNEGMGVAAHGGTVNHAGGTLRISADPTQGVVDENLKSHSYDNLYIADVS
VFPYIPTANPSLTLGALALRLSDHIKNRLAN

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74905; Mature: 74905

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIDNPTVENGESVDVSGSVIFDDATYAFQEVSEAETRQLLSTDTSVTFAGIQRGETFK
CCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE
ILLLTDRYAPSNLVTLRNGIDGWTKDIYGVYSFGAWIFELERSSHPVSLSFKFFLNGQYW
EEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEEEEEEECCEEE
MDGHDLTVNNSGEHRFTDDPITHPNAGVIHFSSDAELHFLHSYDNLRTHESLQQQRRFPG
ECCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCC
NRQSIKEYDVIVIGSGMGGGIVADAVSDAGLDTLVLEIGGLQSPTHVGNAYADWDEIVSE
CCCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH
HQVGHYDRKDNTNFLFGAQMALGGRSLYWSGIILRMQEWEYNYWPTAIRNFLRDEQQGGS
HCCCCCCCCCCCCEEEEEEEECCCCEEEECEEEEEEEECCCCCCHHHHHHHHHHHHCCCC
DGYIRAETLMRKRKTLGNFQDRVVTHLKQKLPDMNITDLPRSRHQPNLNAQEMTNSVLFA
CCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEE
STGVFSTADLLSDSKAFVADVGSRNLTVNLNHLVTHIRPDPNNPGRVSEVVCQDLVGHQE
ECCCCHHHHHHCCCCEEEEECCCCEEEEEHHHEEEEECCCCCCCCHHHHHHHHHHHCCHH
RIYRGKVIVLAAGSIESPKIFLQSNLNDQSGKAGVGLTDHPYLFSSNYLIPESNSFAGDL
HHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCCC
NHAKVLLWAGDARADHYPFYAELLINPWYWHVRRADDDLWQRQPPENRRTEITMKFGFSK
CCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCHHHHHCCCCCCCCEEEEEEECCCH
ELIDSNSVESQGPSQKAAIRVANLTLSDTFIDQARQFRNRILTALEIPHNPNEGMGVAAH
HHCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEC
GGTVNHAGGTLRISADPTQGVVDENLKSHSYDNLYIADVSVFPYIPTANPSLTLGALALR
CCEEECCCCEEEEECCCCCCHHHCCHHHCCCCCEEEEEEEEECCCCCCCCCEEHHHHHHH
LSDHIKNRLAN
HHHHHHHHHCC
>Mature Secondary Structure
MQIIDNPTVENGESVDVSGSVIFDDATYAFQEVSEAETRQLLSTDTSVTFAGIQRGETFK
CCCCCCCCCCCCCEEECCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEE
ILLLTDRYAPSNLVTLRNGIDGWTKDIYGVYSFGAWIFELERSSHPVSLSFKFFLNGQYW
EEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEEEEEEEECCEEE
MDGHDLTVNNSGEHRFTDDPITHPNAGVIHFSSDAELHFLHSYDNLRTHESLQQQRRFPG
ECCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCC
NRQSIKEYDVIVIGSGMGGGIVADAVSDAGLDTLVLEIGGLQSPTHVGNAYADWDEIVSE
CCCCCCCEEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHH
HQVGHYDRKDNTNFLFGAQMALGGRSLYWSGIILRMQEWEYNYWPTAIRNFLRDEQQGGS
HCCCCCCCCCCCCEEEEEEEECCCCEEEECEEEEEEEECCCCCCHHHHHHHHHHHHCCCC
DGYIRAETLMRKRKTLGNFQDRVVTHLKQKLPDMNITDLPRSRHQPNLNAQEMTNSVLFA
CCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEE
STGVFSTADLLSDSKAFVADVGSRNLTVNLNHLVTHIRPDPNNPGRVSEVVCQDLVGHQE
ECCCCHHHHHHCCCCEEEEECCCCEEEEEHHHEEEEECCCCCCCCHHHHHHHHHHHCCHH
RIYRGKVIVLAAGSIESPKIFLQSNLNDQSGKAGVGLTDHPYLFSSNYLIPESNSFAGDL
HHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCEECCCCCCCCCCC
NHAKVLLWAGDARADHYPFYAELLINPWYWHVRRADDDLWQRQPPENRRTEITMKFGFSK
CCEEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCHHHHHCCCCCCCCEEEEEEECCCH
ELIDSNSVESQGPSQKAAIRVANLTLSDTFIDQARQFRNRILTALEIPHNPNEGMGVAAH
HHCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEC
GGTVNHAGGTLRISADPTQGVVDENLKSHSYDNLYIADVSVFPYIPTANPSLTLGALALR
CCEEECCCCEEEEECCCCCCHHHCCHHHCCCCCEEEEEEEEECCCCCCCCCEEHHHHHHH
LSDHIKNRLAN
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA