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The map label for this gene is pcxA

Identifier: 158337598

GI number: 158337598

Start: 4505999

End: 4507447

Strand: Direct

Name: pcxA

Synonym: AM1_4479

Alternate gene names: 158337598

Gene position: 4505999-4507447 (Clockwise)

Preceding gene: 158337595

Following gene: 158337599

Centisome position: 69.28

GC content: 45.96

Gene sequence:

>1449_bases
ATGAGTTCTTCTTCTCCAAACCCATTTAGGCGTTCGCTTAAATTTGTTGAGCAATGGTATCGGGAGACTCCCCAGCGAGC
TTTAGATGGTGCCTATGAAGCGGCTCGCGCCATCGAAGAAATCGAAAAAAAACATTTTAAAGGTCAGCCTGTTCCGCTCC
GCATCCGCACGGAAAGCGTGATGACCAACTACTTTCAATCCGAAGTCCAAAAGAACCTGCAATTTATCCAAACCCGCTTA
CGAGAGTTCAAGTCCAGCTCCTTAGTAGTCGAAGTTGCTGACAAGCTCAAGCCCCCCAGTATCCCCCCAGCTCCTACCCC
CTTAGATACTCCCAACACCATAGATTTTACCGATGAGTACGATGTCACTTCTGAGGAGTACAGTTCCGAACTTGTTTCAC
CCTCTATTGATGCCCAAGGTTCATTAGATAAATTAGCGTTTATCGATGCAGTCTTGAAACGGTATCGTTCGGCCTCTATT
CAGCGAGAAGCAGCTGCAGCGGCCTCTAAGGCGGCAAGAGCCTCGGCACCTAAGTCTGGCTCAGAGATGAAAAAAAATAT
TCCTCAGCCCCTGCCCATCCAGTCCGCCCAAAACTCCCTATATGAATCTGAATTTATTTCAGATGACATTACTGAAGATC
CATCCAAACTAGACAGCAGTAGCTTTATTCCCCGTTCCATTCTGCGTACAGCCACCCGCTTTCGCAAAGAACTCAACCCG
GATCCAGGGACGGAAGATGACATCCTCAATGATTTTCGCAACTCTAGGGTGCGCACCCGGGCCGCCGTTAGCTTTGTATT
GGGGTTGATGATTGTCCCCTTACTCACCCAACAAGTGTCCAAAAACTTGGTGATTGGTCCTTTTGTCGATAAATTGAAAG
GCCCCGAACAAATTGAGATTCGGATTAATCCTGAGATTGAGAATGAGGTCCTGACTGAGTTAGCTCGATTTGAAGAGCGA
CTCAAATTTGAAAGTTTAACCAGCCCCATTCCCCTTTCGCCGGCGGAGATTCAATTCCAACTCAAGGCCAAAGCCGAAGA
CCTAAAAGAAGAATATCAGTGGGACCTACGGCAACCCCTAAAAAATGCCATTTCGGATTTATTCTCGCTGGTCGCCTTAG
CCATTTACTTTGTCCTGAACCGTCAGAAGATTGCGGTTCTCAAGTCTTTCTTTGATGAAATTATCTATGGACTCAGTGAT
AGTGCAAAAGCCTTTATCATCATCTTATTTACGGATGTATTTGTGGGGTTCCACTCACCTCATGGTTGGGAAGTGATTGT
GGAAAGTGTCCTCAGTCATTTTGGTTTACCCCAAGACCGAAATTTCATCAATATGTTTATTGCAACGTTTCCGGTCATGC
TAGACACGGTTTTCAAATACTGGATTTTCCGATATCTGAACCAAATTTCTCCTTCTGCTGTTGCCACCTACCGCAATATG
AATGAGTAG

Upstream 100 bases:

>100_bases
GGTTATGTCTAAATTCTGGTAGGTTTTGCTTACATAACGTCTCAGGACATCATGCCCCCATGACCCATACCCCCAGATTG
CAGCAGCGAGTAGGGTAATC

Downstream 100 bases:

>100_bases
AGATATGCCCTTAAACCTTGCTCATACGGCCTTCAATCAACACTTGAACAATCATTAAAACGAAAAAAATCCCCTACAAT
TTCTTGCAGGGGATTGAAAG

Product: proton extrusion protein PcxA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MSSSSPNPFRRSLKFVEQWYRETPQRALDGAYEAARAIEEIEKKHFKGQPVPLRIRTESVMTNYFQSEVQKNLQFIQTRL
REFKSSSLVVEVADKLKPPSIPPAPTPLDTPNTIDFTDEYDVTSEEYSSELVSPSIDAQGSLDKLAFIDAVLKRYRSASI
QREAAAAASKAARASAPKSGSEMKKNIPQPLPIQSAQNSLYESEFISDDITEDPSKLDSSSFIPRSILRTATRFRKELNP
DPGTEDDILNDFRNSRVRTRAAVSFVLGLMIVPLLTQQVSKNLVIGPFVDKLKGPEQIEIRINPEIENEVLTELARFEER
LKFESLTSPIPLSPAEIQFQLKAKAEDLKEEYQWDLRQPLKNAISDLFSLVALAIYFVLNRQKIAVLKSFFDEIIYGLSD
SAKAFIIILFTDVFVGFHSPHGWEVIVESVLSHFGLPQDRNFINMFIATFPVMLDTVFKYWIFRYLNQISPSAVATYRNM
NE

Sequences:

>Translated_482_residues
MSSSSPNPFRRSLKFVEQWYRETPQRALDGAYEAARAIEEIEKKHFKGQPVPLRIRTESVMTNYFQSEVQKNLQFIQTRL
REFKSSSLVVEVADKLKPPSIPPAPTPLDTPNTIDFTDEYDVTSEEYSSELVSPSIDAQGSLDKLAFIDAVLKRYRSASI
QREAAAAASKAARASAPKSGSEMKKNIPQPLPIQSAQNSLYESEFISDDITEDPSKLDSSSFIPRSILRTATRFRKELNP
DPGTEDDILNDFRNSRVRTRAAVSFVLGLMIVPLLTQQVSKNLVIGPFVDKLKGPEQIEIRINPEIENEVLTELARFEER
LKFESLTSPIPLSPAEIQFQLKAKAEDLKEEYQWDLRQPLKNAISDLFSLVALAIYFVLNRQKIAVLKSFFDEIIYGLSD
SAKAFIIILFTDVFVGFHSPHGWEVIVESVLSHFGLPQDRNFINMFIATFPVMLDTVFKYWIFRYLNQISPSAVATYRNM
NE
>Mature_481_residues
SSSSPNPFRRSLKFVEQWYRETPQRALDGAYEAARAIEEIEKKHFKGQPVPLRIRTESVMTNYFQSEVQKNLQFIQTRLR
EFKSSSLVVEVADKLKPPSIPPAPTPLDTPNTIDFTDEYDVTSEEYSSELVSPSIDAQGSLDKLAFIDAVLKRYRSASIQ
REAAAAASKAARASAPKSGSEMKKNIPQPLPIQSAQNSLYESEFISDDITEDPSKLDSSSFIPRSILRTATRFRKELNPD
PGTEDDILNDFRNSRVRTRAAVSFVLGLMIVPLLTQQVSKNLVIGPFVDKLKGPEQIEIRINPEIENEVLTELARFEERL
KFESLTSPIPLSPAEIQFQLKAKAEDLKEEYQWDLRQPLKNAISDLFSLVALAIYFVLNRQKIAVLKSFFDEIIYGLSDS
AKAFIIILFTDVFVGFHSPHGWEVIVESVLSHFGLPQDRNFINMFIATFPVMLDTVFKYWIFRYLNQISPSAVATYRNMN
E

Specific function: Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cemA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCXA_ACAM1 (B0CG09)

Other databases:

- EMBL:   CP000828
- RefSeq:   YP_001518773.1
- GeneID:   5683281
- GenomeReviews:   CP000828_GR
- KEGG:   amr:AM1_4479
- HOGENOM:   HBG439473
- OMA:   ILFTDVF
- ProtClustDB:   PRK02507
- BioCyc:   AMAR329726:AM1_4479-MONOMER
- HAMAP:   MF_01308
- InterPro:   IPR004282

Pfam domain/function: PF03040 CemA

EC number: NA

Molecular weight: Translated: 54781; Mature: 54650

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x137abc3c)-; HASH(0x13c18014)-; HASH(0x13d9f804)-; HASH(0x11e5de70)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSPNPFRRSLKFVEQWYRETPQRALDGAYEAARAIEEIEKKHFKGQPVPLRIRTESV
CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHH
MTNYFQSEVQKNLQFIQTRLREFKSSSLVVEVADKLKPPSIPPAPTPLDTPNTIDFTDEY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DVTSEEYSSELVSPSIDAQGSLDKLAFIDAVLKRYRSASIQREAAAAASKAARASAPKSG
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SEMKKNIPQPLPIQSAQNSLYESEFISDDITEDPSKLDSSSFIPRSILRTATRFRKELNP
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCC
DPGTEDDILNDFRNSRVRTRAAVSFVLGLMIVPLLTQQVSKNLVIGPFVDKLKGPEQIEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCCEEEE
RINPEIENEVLTELARFEERLKFESLTSPIPLSPAEIQFQLKAKAEDLKEEYQWDLRQPL
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHH
KNAISDLFSLVALAIYFVLNRQKIAVLKSFFDEIIYGLSDSAKAFIIILFTDVFVGFHSP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCC
HGWEVIVESVLSHFGLPQDRNFINMFIATFPVMLDTVFKYWIFRYLNQISPSAVATYRNM
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
NE
CH
>Mature Secondary Structure 
SSSSPNPFRRSLKFVEQWYRETPQRALDGAYEAARAIEEIEKKHFKGQPVPLRIRTESV
CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHH
MTNYFQSEVQKNLQFIQTRLREFKSSSLVVEVADKLKPPSIPPAPTPLDTPNTIDFTDEY
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
DVTSEEYSSELVSPSIDAQGSLDKLAFIDAVLKRYRSASIQREAAAAASKAARASAPKSG
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SEMKKNIPQPLPIQSAQNSLYESEFISDDITEDPSKLDSSSFIPRSILRTATRFRKELNP
HHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCC
DPGTEDDILNDFRNSRVRTRAAVSFVLGLMIVPLLTQQVSKNLVIGPFVDKLKGPEQIEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHCCCCCEEEE
RINPEIENEVLTELARFEERLKFESLTSPIPLSPAEIQFQLKAKAEDLKEEYQWDLRQPL
EECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHH
KNAISDLFSLVALAIYFVLNRQKIAVLKSFFDEIIYGLSDSAKAFIIILFTDVFVGFHSP
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCC
HGWEVIVESVLSHFGLPQDRNFINMFIATFPVMLDTVFKYWIFRYLNQISPSAVATYRNM
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
NE
CH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA