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The map label for this gene is yfbE [C]

Identifier: 158337594

GI number: 158337594

Start: 4500704

End: 4501879

Strand: Reverse

Name: yfbE [C]

Synonym: AM1_4475

Alternate gene names: 158337594

Gene position: 4501879-4500704 (Counterclockwise)

Preceding gene: 158337596

Following gene: 158337593

Centisome position: 69.22

GC content: 51.96

Gene sequence:

>1176_bases
ATGCCCCGTTCAAAAGACCAATTTTTGGTATTTGGTTCTCCCGCTATTGAAGAAGCGGAAATGCAAGAAGTCATGGCTAG
CATGCGAACGGGCTGGTTGGGGACTGGCCCGAAAGTGATGCGGTTTGAACAGGATTTTTGCACCTATAAAGGTAGCCAAC
ATGCGATCGCAGTCAATTCCTGTACTGCTGCTTTACACCTAAGCCTGTTGGCAGCGGGTCTCAATCCCGGCGATGAGGTG
ATCACTACGCCGTTAACTTTCTGTGCCACGGCCAATGCCATCATCCATGCAGGGGGTGTCCCAGTCTTGGCGGATGTCGA
TCCGGAGACCATGAATATCGATCCAGCTCAGGTCGAAGCCAAAATTACCGATCGCACCAAAGCCATTATTCCCGTCCATT
TTGCCGGTCGTCCCTGCGAGATGGATGCCCTTTGTGCTTTAGCAGAGCAATATAGCTTGGTGCTAATCGAAGACTGCGCC
CATGCCATTGAGACAGAATATCAAGGACGCAAAGCCGGAACCTTTAGCAACTTTGGCTGCTTTAGCTTCTACGTCACCAA
GAACATTACGACGGGGGAGGGGGGCATGATTCTCACCCAAACCCAGGAAGATACAGATCGGATTAAAGTGTTGGCTCTCC
ACGGCATGAGCCAAGATGCGTGGAAGCGCTTTAGTGATGATGGCTATAACCATTACCAAGTGGTAGAAGCAGGGTTTAAG
TACAACATGATGGATATTCAGGCTGCCATCGGGATTCACCAGCTCCAACGGGTCACCCCCTATTGGAATAGACGGCAGCA
GATCTGGCAGCAGTACAATCAGGCGCTGGCCGATCTGCCCCTCACCCTGCCCACCCCCCCAGCCCCAAACACGGTGCATG
GGTATCACCTCTATACCCTCCTCATTGATGAAAGCCAAACGGGGATTAGTCGTGACCAGTTCCTGGTTGCCATGCATCGC
CAACATATTGGTACTGGCGTTCACTATTTAAGCCTGCCAGAGCATCCCTACTATCAACACCGGTTTGGCTGGCAACCTCA
GGACTATCCCCATGCCACCCGCATTGGCCAACAAACCGTTAGCATTCCCTTGTCCGCTAAATTGAACGACCTAGATGTTG
AGGATGTTGTGGCGGCAGTCCACCAAAGTTTAGATACCTCGGCAATCGCGGCCTAA

Upstream 100 bases:

>100_bases
GAATATTACAGTATGGAGAATACTGTTGATCCTTCAACACAATTCTTTGATGATTTCGTTGCCGCGAGACTAACCTAAAT
CCTCTAAGAGAGTGAGATGC

Downstream 100 bases:

>100_bases
CTGACCTGATTCTGCTCTTTTACGGCATTTTATCCGTCATGCGCATCGTCTTTTTAATTCCAGATTTAAAGCAAGGGTGG
TTCTGGGAAAAGCTAGAGAC

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MPRSKDQFLVFGSPAIEEAEMQEVMASMRTGWLGTGPKVMRFEQDFCTYKGSQHAIAVNSCTAALHLSLLAAGLNPGDEV
ITTPLTFCATANAIIHAGGVPVLADVDPETMNIDPAQVEAKITDRTKAIIPVHFAGRPCEMDALCALAEQYSLVLIEDCA
HAIETEYQGRKAGTFSNFGCFSFYVTKNITTGEGGMILTQTQEDTDRIKVLALHGMSQDAWKRFSDDGYNHYQVVEAGFK
YNMMDIQAAIGIHQLQRVTPYWNRRQQIWQQYNQALADLPLTLPTPPAPNTVHGYHLYTLLIDESQTGISRDQFLVAMHR
QHIGTGVHYLSLPEHPYYQHRFGWQPQDYPHATRIGQQTVSIPLSAKLNDLDVEDVVAAVHQSLDTSAIAA

Sequences:

>Translated_391_residues
MPRSKDQFLVFGSPAIEEAEMQEVMASMRTGWLGTGPKVMRFEQDFCTYKGSQHAIAVNSCTAALHLSLLAAGLNPGDEV
ITTPLTFCATANAIIHAGGVPVLADVDPETMNIDPAQVEAKITDRTKAIIPVHFAGRPCEMDALCALAEQYSLVLIEDCA
HAIETEYQGRKAGTFSNFGCFSFYVTKNITTGEGGMILTQTQEDTDRIKVLALHGMSQDAWKRFSDDGYNHYQVVEAGFK
YNMMDIQAAIGIHQLQRVTPYWNRRQQIWQQYNQALADLPLTLPTPPAPNTVHGYHLYTLLIDESQTGISRDQFLVAMHR
QHIGTGVHYLSLPEHPYYQHRFGWQPQDYPHATRIGQQTVSIPLSAKLNDLDVEDVVAAVHQSLDTSAIAA
>Mature_390_residues
PRSKDQFLVFGSPAIEEAEMQEVMASMRTGWLGTGPKVMRFEQDFCTYKGSQHAIAVNSCTAALHLSLLAAGLNPGDEVI
TTPLTFCATANAIIHAGGVPVLADVDPETMNIDPAQVEAKITDRTKAIIPVHFAGRPCEMDALCALAEQYSLVLIEDCAH
AIETEYQGRKAGTFSNFGCFSFYVTKNITTGEGGMILTQTQEDTDRIKVLALHGMSQDAWKRFSDDGYNHYQVVEAGFKY
NMMDIQAAIGIHQLQRVTPYWNRRQQIWQQYNQALADLPLTLPTPPAPNTVHGYHLYTLLIDESQTGISRDQFLVAMHRQ
HIGTGVHYLSLPEHPYYQHRFGWQPQDYPHATRIGQQTVSIPLSAKLNDLDVEDVVAAVHQSLDTSAIAA

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=377, Percent_Identity=40.5835543766578, Blast_Score=279, Evalue=2e-76,
Organism=Escherichia coli, GI2367285, Length=376, Percent_Identity=33.2446808510638, Blast_Score=193, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43364; Mature: 43232

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSKDQFLVFGSPAIEEAEMQEVMASMRTGWLGTGPKVMRFEQDFCTYKGSQHAIAVNS
CCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHEEEEHHHHHCCCCCCEEEEEH
CTAALHLSLLAAGLNPGDEVITTPLTFCATANAIIHAGGVPVLADVDPETMNIDPAQVEA
HHHHHHHHHHHHCCCCCCHHEECCHHHHHHCCEEEECCCCCEEEECCCCCCCCCHHHEEE
KITDRTKAIIPVHFAGRPCEMDALCALAEQYSLVLIEDCAHAIETEYQGRKAGTFSNFGC
EEECCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCCCCCCCCCCE
FSFYVTKNITTGEGGMILTQTQEDTDRIKVLALHGMSQDAWKRFSDDGYNHYQVVEAGFK
EEEEEEECEEECCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHCCCCCCEEEEEECCCE
YNMMDIQAAIGIHQLQRVTPYWNRRQQIWQQYNQALADLPLTLPTPPAPNTVHGYHLYTL
ECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
LIDESQTGISRDQFLVAMHRQHIGTGVHYLSLPEHPYYQHRFGWQPQDYPHATRIGQQTV
EEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCHHHHCCCEEE
SIPLSAKLNDLDVEDVVAAVHQSLDTSAIAA
EEEEECCCCCCCHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
PRSKDQFLVFGSPAIEEAEMQEVMASMRTGWLGTGPKVMRFEQDFCTYKGSQHAIAVNS
CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHEEEEHHHHHCCCCCCEEEEEH
CTAALHLSLLAAGLNPGDEVITTPLTFCATANAIIHAGGVPVLADVDPETMNIDPAQVEA
HHHHHHHHHHHHCCCCCCHHEECCHHHHHHCCEEEECCCCCEEEECCCCCCCCCHHHEEE
KITDRTKAIIPVHFAGRPCEMDALCALAEQYSLVLIEDCAHAIETEYQGRKAGTFSNFGC
EEECCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCCCCCCCCCCE
FSFYVTKNITTGEGGMILTQTQEDTDRIKVLALHGMSQDAWKRFSDDGYNHYQVVEAGFK
EEEEEEECEEECCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHCCCCCCEEEEEECCCE
YNMMDIQAAIGIHQLQRVTPYWNRRQQIWQQYNQALADLPLTLPTPPAPNTVHGYHLYTL
ECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE
LIDESQTGISRDQFLVAMHRQHIGTGVHYLSLPEHPYYQHRFGWQPQDYPHATRIGQQTV
EEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCCCHHHHCCCEEE
SIPLSAKLNDLDVEDVVAAVHQSLDTSAIAA
EEEEECCCCCCCHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]