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The map label for this gene is apcA

Identifier: 158337588

GI number: 158337588

Start: 4495490

End: 4495957

Strand: Direct

Name: apcA

Synonym: AM1_4469

Alternate gene names: NA

Gene position: 4495490-4495957 (Clockwise)

Preceding gene: 158337587

Following gene: 158337589

Centisome position: 69.12

GC content: 48.29

Gene sequence:

>468_bases
ATGCTGTCACAATTGAAGCGACTGAATATTGAAACAGATGGTCGCTATGCCACTGAGGCAGATCTAGCCTTTTTGAAGTC
CTACTTGCAATCCGTGCGCGACCGTATTAGCGCCTATGAAAAGATTAGAGATGCTGAAGATGCAATTACGGATCAAGCAG
ACGAAGTTTTAATGGCTGCAGATCCCAAGGTTTTTCATAAGGGGTCGCAGGATTATTCCGAAACGTGTCGCCGAGATCGC
AGAAACACATTGCGTCATGCCGCAGCAGCCATGCTATTTAACGATTTAGACCGCCTGCGAGATGGCCTCCTACTCTGGCA
AAGAACCATTGTACATGCCGTCAAGGATGAGCAGGCCTCTGCCCTGACTTGGCAAGAGATGCCGGGGGTATTGAAAGACC
ATCTATCCGATGAGGAAGCAGAGTTAATGATGCCTGCGCTCCGCCTCAATCAGGCCTTATTAAATTAA

Upstream 100 bases:

>100_bases
GTCCATGATCAGCCAACTGGAAGAAACTCGCAGTGATGTGTCCACTCACTTAGCTAATTCACAACTTGTATAACAACAGA
TTTTATCTGGGGGAAATAAT

Downstream 100 bases:

>100_bases
TCATTACAGAACCATTATTGAGCGTTTTTAGGGTTTCTAGAAATTATGTCAGCCTCACAAAATACACCCGGGAGTAACAG
TAGCTCCCATTGGCTTGATC

Product: allophycocyanin alpha subunit ApcA

Products: NA

Alternate protein names: Allophycocyanin Alpha Subunit ApcA; Allophycocyanin Alpha Subunit; Allophycocyanin Beta-18 Subunit

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLSQLKRLNIETDGRYATEADLAFLKSYLQSVRDRISAYEKIRDAEDAITDQADEVLMAADPKVFHKGSQDYSETCRRDR
RNTLRHAAAAMLFNDLDRLRDGLLLWQRTIVHAVKDEQASALTWQEMPGVLKDHLSDEEAELMMPALRLNQALLN

Sequences:

>Translated_155_residues
MLSQLKRLNIETDGRYATEADLAFLKSYLQSVRDRISAYEKIRDAEDAITDQADEVLMAADPKVFHKGSQDYSETCRRDR
RNTLRHAAAAMLFNDLDRLRDGLLLWQRTIVHAVKDEQASALTWQEMPGVLKDHLSDEEAELMMPALRLNQALLN
>Mature_155_residues
MLSQLKRLNIETDGRYATEADLAFLKSYLQSVRDRISAYEKIRDAEDAITDQADEVLMAADPKVFHKGSQDYSETCRRDR
RNTLRHAAAAMLFNDLDRLRDGLLLWQRTIVHAVKDEQASALTWQEMPGVLKDHLSDEEAELMMPALRLNQALLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17789; Mature: 17789

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQLKRLNIETDGRYATEADLAFLKSYLQSVRDRISAYEKIRDAEDAITDQADEVLMAA
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPKVFHKGSQDYSETCRRDRRNTLRHAAAAMLFNDLDRLRDGLLLWQRTIVHAVKDEQAS
CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTWQEMPGVLKDHLSDEEAELMMPALRLNQALLN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSQLKRLNIETDGRYATEADLAFLKSYLQSVRDRISAYEKIRDAEDAITDQADEVLMAA
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPKVFHKGSQDYSETCRRDRRNTLRHAAAAMLFNDLDRLRDGLLLWQRTIVHAVKDEQAS
CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTWQEMPGVLKDHLSDEEAELMMPALRLNQALLN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA