| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is vhb [H]
Identifier: 158337527
GI number: 158337527
Start: 4433191
End: 4434207
Strand: Direct
Name: vhb [H]
Synonym: AM1_4406
Alternate gene names: 158337527
Gene position: 4433191-4434207 (Clockwise)
Preceding gene: 158337526
Following gene: 158337528
Centisome position: 68.16
GC content: 48.28
Gene sequence:
>1017_bases ATGACCTTACAAGTTGAAATCCTTGAAAGTAGCTTTGAGAAAGTAAAACCTCAAGCTAATGAATTTGTTTCAAGTTTTTA TAATCACTTATTCACGGATTACCCAGAGGCTCAACCTCTTTTTGAGGGAACAGACATGGAGAAGCAAGGTGGCAAGCTCT TGCAATCTCTGGTATTGGTGATTGAGAATTTGCGCAAACCTGATGCGTTGGGTAATGCTCTCAAAGGTCTGGGAGCCCGA CATGTGAAATATGGGGCCTTACCGGAGCATTACCCCTTGGTGGGAGCGACCTTACTGAAGACGTTTGAACAATACCTAGG GGATGCATGGACTGAAGAGGTTCAAACAGCCTGGGTGGATGCCTACGGAGCCATTACCACCATCATGTTGGACGGTGCAG ATTATTCAGAGGCAGATGTCCAGCTCAAACCAGAAGCGCCACCGACTGAATCCGGCTTGCAAGTTGAGCTATTGGAAACG AGCTTTGCCCAAGTGAAGCCTGTCGCTAATGAGTTTGCGGATCGCTTTTACGAGAACCTGTTCACTGATTATCCCGCTGC CCAACCCTTATTTGCGAATACAGATATCAAACAACAAAGCAAAAAATTGCTGCAATCCCTCGTGTTGGTTGTTGAAAATC TGCGTAAGCCAGATGCACTAGGAGACGCCCTCACGGGACTGGGGGCTCGGCATGTGAAATATGGCGCTTTACCGGAGCAT TACCCCTTGGTGGGTAATACCCTGCTCAAAACCTTTGAGGAATTTTTAGGGACTGCCTGGACTGATGATGTCAAACAGGC TTGGGTCGATGCCTATGGGGCTATCAGCACCATCATGTTAGACGGTGCTGATTATTCCACAGCAGATTTAGATTTGAATT CAGCCTCCCCCGCTGCAGCCGCCTCACCTAGCAGCTTCTCCAGTGAGGCTTCAGAGCCTGAGCGACCAACAGGATTGTTA TTAGGGCTGGCAGGTGGCGGCATTATTGCGGTCATTATTGCCATTCTGTTGGTCTAA
Upstream 100 bases:
>100_bases ACTGAACAGCTATTAATCCCACCTTTGAAAAAAGATTAGACTCGGTTCAATTAATCTTTTGAATTAGCCCTTGAGCCCCA TATCTTCAATAGGTAAATCT
Downstream 100 bases:
>100_bases ATTTTCTAGGGCAATTGTAGTGGCCAAAACGAAAAAATCTTTTTTGAGCTTATCGGCTCTATTTAATGTCAGAAATACTG TGATTGTGCTGTGTTTAATT
Product: globin domain-containing protein
Products: @TETR01txt*tetrahydropteridine!; NO3-; NAD(P); Proton [C]
Alternate protein names: Soluble cytochrome O [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTLQVEILESSFEKVKPQANEFVSSFYNHLFTDYPEAQPLFEGTDMEKQGGKLLQSLVLVIENLRKPDALGNALKGLGAR HVKYGALPEHYPLVGATLLKTFEQYLGDAWTEEVQTAWVDAYGAITTIMLDGADYSEADVQLKPEAPPTESGLQVELLET SFAQVKPVANEFADRFYENLFTDYPAAQPLFANTDIKQQSKKLLQSLVLVVENLRKPDALGDALTGLGARHVKYGALPEH YPLVGNTLLKTFEEFLGTAWTDDVKQAWVDAYGAISTIMLDGADYSTADLDLNSASPAAAASPSSFSSEASEPERPTGLL LGLAGGGIIAVIIAILLV
Sequences:
>Translated_338_residues MTLQVEILESSFEKVKPQANEFVSSFYNHLFTDYPEAQPLFEGTDMEKQGGKLLQSLVLVIENLRKPDALGNALKGLGAR HVKYGALPEHYPLVGATLLKTFEQYLGDAWTEEVQTAWVDAYGAITTIMLDGADYSEADVQLKPEAPPTESGLQVELLET SFAQVKPVANEFADRFYENLFTDYPAAQPLFANTDIKQQSKKLLQSLVLVVENLRKPDALGDALTGLGARHVKYGALPEH YPLVGNTLLKTFEEFLGTAWTDDVKQAWVDAYGAISTIMLDGADYSTADLDLNSASPAAAASPSSFSSEASEPERPTGLL LGLAGGGIIAVIIAILLV >Mature_337_residues TLQVEILESSFEKVKPQANEFVSSFYNHLFTDYPEAQPLFEGTDMEKQGGKLLQSLVLVIENLRKPDALGNALKGLGARH VKYGALPEHYPLVGATLLKTFEQYLGDAWTEEVQTAWVDAYGAITTIMLDGADYSEADVQLKPEAPPTESGLQVELLETS FAQVKPVANEFADRFYENLFTDYPAAQPLFANTDIKQQSKKLLQSLVLVVENLRKPDALGDALTGLGARHVKYGALPEHY PLVGNTLLKTFEEFLGTAWTDDVKQAWVDAYGAISTIMLDGADYSTADLDLNSASPAAAASPSSFSSEASEPERPTGLLL GLAGGGIIAVIIAILLV
Specific function: This protein functions as a terminal oxidase [H]
COG id: COG1017
COG function: function code C; Hemoglobin-like flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the globin family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321673, Length=126, Percent_Identity=30.1587301587302, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012292 - InterPro: IPR009050 - InterPro: IPR000971 [H]
Pfam domain/function: PF00042 Globin [H]
EC number: 1.5.1.34 [C]
Molecular weight: Translated: 36646; Mature: 36515
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: PS01033 GLOBIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLQVEILESSFEKVKPQANEFVSSFYNHLFTDYPEAQPLFEGTDMEKQGGKLLQSLVLV CCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IENLRKPDALGNALKGLGARHVKYGALPEHYPLVGATLLKTFEQYLGDAWTEEVQTAWVD HHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGAITTIMLDGADYSEADVQLKPEAPPTESGLQVELLETSFAQVKPVANEFADRFYENL HHHHHHHEEECCCCCCCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH FTDYPAAQPLFANTDIKQQSKKLLQSLVLVVENLRKPDALGDALTGLGARHVKYGALPEH HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCC YPLVGNTLLKTFEEFLGTAWTDDVKQAWVDAYGAISTIMLDGADYSTADLDLNSASPAAA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC ASPSSFSSEASEPERPTGLLLGLAGGGIIAVIIAILLV CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHC >Mature Secondary Structure TLQVEILESSFEKVKPQANEFVSSFYNHLFTDYPEAQPLFEGTDMEKQGGKLLQSLVLV CEEEHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IENLRKPDALGNALKGLGARHVKYGALPEHYPLVGATLLKTFEQYLGDAWTEEVQTAWVD HHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYGAITTIMLDGADYSEADVQLKPEAPPTESGLQVELLETSFAQVKPVANEFADRFYENL HHHHHHHEEECCCCCCCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH FTDYPAAQPLFANTDIKQQSKKLLQSLVLVVENLRKPDALGDALTGLGARHVKYGALPEH HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCC YPLVGNTLLKTFEEFLGTAWTDDVKQAWVDAYGAISTIMLDGADYSTADLDLNSASPAAA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC ASPSSFSSEASEPERPTGLLLGLAGGGIIAVIIAILLV CCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FAD [C]
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dihydropteridine; 2 nitric oxide; O2; NAD(P)H [C]
Specific reaction: NAD(P)H + dihydropteridine = NAD(P)+ @TETR01.txt*tetrahydropteridine! 2 nitric oxide + 2 O2 + NAD(P)H = 2 NO3- + NAD(P) + Proton [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3067078; 3736670; 2685332; 2681149; 9115439 [H]