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The map label for this gene is 158337515

Identifier: 158337515

GI number: 158337515

Start: 4423784

End: 4424368

Strand: Reverse

Name: 158337515

Synonym: AM1_4394

Alternate gene names: NA

Gene position: 4424368-4423784 (Counterclockwise)

Preceding gene: 158337516

Following gene: 158337514

Centisome position: 68.03

GC content: 44.62

Gene sequence:

>585_bases
ATGGATAATTCTTTAGCAACCCTCTATTTGACACTTTTCTTGGTCTTACTCTGCTTCGCAGGGTGGTTTGTGTTCCGCCA
AGTCCTCAGAACACGCAAGAATGAACTCACCATTTCCAAGCTCGAAACCAAATTTAAAAAAGATATTGGTACAGTCGAAG
AATATTTCGAGCTAGGCAGTATCTATTTACAGAAAAAACTTTTCGTCCAAGCGGTTACTCAACTCAAAAAGGCACTGAAG
GCAGCTGAAGATGAGCTTGGCGCTATTCCTTCAGAGGAAGACGATGCTGAGACAACAGACAACTCCCCTATCATAGAACC
CTTAGCTCCGTTATATAACGCTCTGGGCTATGCCTACTTCGGCCAAGAACAGTTTGATTTAGCCATTCGGAACTATAAAG
AAGCGCTGAAGTGTAAAGCGGATTATCTAGTGGCCATGAATAATCTAGCCCATGCCTATGAGCGCAAAAAGCTGATGCGC
CAAGCCCTAGATACTTATGATGAGGTATTGTCCCAAGATCCGAAGAACGATACAGCCAAGCGCCGTTCTCGATCGCTTCG
CAAGCAAGTTGCGGTTTCGGGATAA

Upstream 100 bases:

>100_bases
TATCTACCTCACTCCCTCCACAGGTACAAGATAATTGATGAGTTTGATAGTCTGGAAAGATATCAAGACTGTATCAAGGA
ACTGTTGAAATCAAACGACA

Downstream 100 bases:

>100_bases
GCCTAATGCCTGATCCCATCATGTATGGCGATGATGATATGTACGTCGTTCTGGAAACCAATCAGCCAGAACAGTTTTTA
ACAGCGGCAGAATTACTCGC

Product: TPR repeat-containing photosystem I assembly protein Ycf37

Products: NA

Alternate protein names: Photosystem I Assembly Related Protein Ycf; Tetratricopeptide Repeat Domain Protein; Photosystem I Assembly Protein; Photosystem I Assembly Related Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Photosystem I Assembly Protein Ycf; TPR Domain-Containing Protein

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDNSLATLYLTLFLVLLCFAGWFVFRQVLRTRKNELTISKLETKFKKDIGTVEEYFELGSIYLQKKLFVQAVTQLKKALK
AAEDELGAIPSEEDDAETTDNSPIIEPLAPLYNALGYAYFGQEQFDLAIRNYKEALKCKADYLVAMNNLAHAYERKKLMR
QALDTYDEVLSQDPKNDTAKRRSRSLRKQVAVSG

Sequences:

>Translated_194_residues
MDNSLATLYLTLFLVLLCFAGWFVFRQVLRTRKNELTISKLETKFKKDIGTVEEYFELGSIYLQKKLFVQAVTQLKKALK
AAEDELGAIPSEEDDAETTDNSPIIEPLAPLYNALGYAYFGQEQFDLAIRNYKEALKCKADYLVAMNNLAHAYERKKLMR
QALDTYDEVLSQDPKNDTAKRRSRSLRKQVAVSG
>Mature_194_residues
MDNSLATLYLTLFLVLLCFAGWFVFRQVLRTRKNELTISKLETKFKKDIGTVEEYFELGSIYLQKKLFVQAVTQLKKALK
AAEDELGAIPSEEDDAETTDNSPIIEPLAPLYNALGYAYFGQEQFDLAIRNYKEALKCKADYLVAMNNLAHAYERKKLMR
QALDTYDEVLSQDPKNDTAKRRSRSLRKQVAVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22192; Mature: 22192

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSLATLYLTLFLVLLCFAGWFVFRQVLRTRKNELTISKLETKFKKDIGTVEEYFELGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLQKKLFVQAVTQLKKALKAAEDELGAIPSEEDDAETTDNSPIIEPLAPLYNALGYAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GQEQFDLAIRNYKEALKCKADYLVAMNNLAHAYERKKLMRQALDTYDEVLSQDPKNDTAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RRSRSLRKQVAVSG
HHHHHHHHHHHCCC
>Mature Secondary Structure
MDNSLATLYLTLFLVLLCFAGWFVFRQVLRTRKNELTISKLETKFKKDIGTVEEYFELGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYLQKKLFVQAVTQLKKALKAAEDELGAIPSEEDDAETTDNSPIIEPLAPLYNALGYAYF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GQEQFDLAIRNYKEALKCKADYLVAMNNLAHAYERKKLMRQALDTYDEVLSQDPKNDTAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RRSRSLRKQVAVSG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA