Click here to switch to the map view.

The map label for this gene is ybiB [C]

Identifier: 158337507

GI number: 158337507

Start: 4416813

End: 4417865

Strand: Reverse

Name: ybiB [C]

Synonym: AM1_4386

Alternate gene names: 158337507

Gene position: 4417865-4416813 (Counterclockwise)

Preceding gene: 158337508

Following gene: 158337506

Centisome position: 67.93

GC content: 51.38

Gene sequence:

>1053_bases
ATGAGTCAGATTTTTAGAGAATTTTTAAAGAAAGTCGGCAGTGGGAGGCATACCAGTAAAGATTTAAGCAGAGTCGAGGC
CCAATCCGCCCTGGAAATGATGTTGCAGCAAGAAGCCACCCCCGCTCAAATTGGGGCTTTTTTAATTGCGCACCGCATTA
AACGACCCACTGGAATCGAGTTGGCTGGTTTTTTGGATGCTTATGAACATCTAGGCCCGGCCTTACCCGCTGTGTCTGCG
TCCTCTCCCGTAATCGTGTTTAGTGTTCCCTATGATGGGCGCTCACGTACGGCTCCTGTCTTACCTGTAACTGCCCTGAT
TTTAGCCGCCTCGGGCTGTCCGGTGTTGCTTCATGGTGGCGATCGGATGCCCACCAAGTATGGCGTACCCTTGGTGGATC
TTTGGCAGGGATTAGGGGTGGATTGGTCCCATCGATCTCTGGCTCAAATCCATCAAGTTCTATCCAAATATGGCCTCGGG
TTTATCTATCTACCGGAGCAGTTTCCTTTGGCCCAAGGAATGGTGGAGTTTAGGGATCAAGTGGGGAAGCGTCCGCCTCT
AGCGACCACGGAGCTGCTCTGGCAGCCCTACCTAGGGGAACATCATTTGATTGCAGGGTTTGTCCATCCCCCCACGGAAA
ATATGATGCGGGAGGCTTTAGCCCTGCGAGGGACAGACCATTTCACCACGATCAAGGGATTGGAAGGGAGTTGTGATTTG
CCCCGCGATCGCAAAGCAATACTCGGTCTCAATCACCCCTCATCCGAACAAACCTGGCAGCGCTTAATCCTCTCGGCTCG
AGATTATGATCTCGGAGGACCTGAAATCCCCTACACTTCCACCAAAACACTGCTAGAGCAACTTCATGCCGTCTTAAACG
GCCAAACCTGCGAATTGATGCCTGCCGTCTTATGGAATGCAGGCTTCTATCTTTGGCATGTGGGGATTAGCTCCAGCTTG
AATGACGGACTGCAAGCAGCAGAAAATCTATTAACCAATGGGACAGCCAAACAAACCCTTACCCAAGTCCAGGCATTCCT
AGCAGACCTGTAA

Upstream 100 bases:

>100_bases
TCTCCAATATTCCATAAAGCCCATTAAGAGGAGATGTGGGTAAATTGCTACACAAGTATCAAGGTGACCCTTGATTCTAG
AGTTGGCAAAGTAAACAGCC

Downstream 100 bases:

>100_bases
AAGCATGGAGAAATTTTGATCCCCTCCATCATCATCGGTTTTGCGCCATTCAAAACGCTATGAACCAGCCAACATCCCTC
ACGCAACAGAATTATATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSQIFREFLKKVGSGRHTSKDLSRVEAQSALEMMLQQEATPAQIGAFLIAHRIKRPTGIELAGFLDAYEHLGPALPAVSA
SSPVIVFSVPYDGRSRTAPVLPVTALILAASGCPVLLHGGDRMPTKYGVPLVDLWQGLGVDWSHRSLAQIHQVLSKYGLG
FIYLPEQFPLAQGMVEFRDQVGKRPPLATTELLWQPYLGEHHLIAGFVHPPTENMMREALALRGTDHFTTIKGLEGSCDL
PRDRKAILGLNHPSSEQTWQRLILSARDYDLGGPEIPYTSTKTLLEQLHAVLNGQTCELMPAVLWNAGFYLWHVGISSSL
NDGLQAAENLLTNGTAKQTLTQVQAFLADL

Sequences:

>Translated_350_residues
MSQIFREFLKKVGSGRHTSKDLSRVEAQSALEMMLQQEATPAQIGAFLIAHRIKRPTGIELAGFLDAYEHLGPALPAVSA
SSPVIVFSVPYDGRSRTAPVLPVTALILAASGCPVLLHGGDRMPTKYGVPLVDLWQGLGVDWSHRSLAQIHQVLSKYGLG
FIYLPEQFPLAQGMVEFRDQVGKRPPLATTELLWQPYLGEHHLIAGFVHPPTENMMREALALRGTDHFTTIKGLEGSCDL
PRDRKAILGLNHPSSEQTWQRLILSARDYDLGGPEIPYTSTKTLLEQLHAVLNGQTCELMPAVLWNAGFYLWHVGISSSL
NDGLQAAENLLTNGTAKQTLTQVQAFLADL
>Mature_349_residues
SQIFREFLKKVGSGRHTSKDLSRVEAQSALEMMLQQEATPAQIGAFLIAHRIKRPTGIELAGFLDAYEHLGPALPAVSAS
SPVIVFSVPYDGRSRTAPVLPVTALILAASGCPVLLHGGDRMPTKYGVPLVDLWQGLGVDWSHRSLAQIHQVLSKYGLGF
IYLPEQFPLAQGMVEFRDQVGKRPPLATTELLWQPYLGEHHLIAGFVHPPTENMMREALALRGTDHFTTIKGLEGSCDLP
RDRKAILGLNHPSSEQTWQRLILSARDYDLGGPEIPYTSTKTLLEQLHAVLNGQTCELMPAVLWNAGFYLWHVGISSSLN
DGLQAAENLLTNGTAKQTLTQVQAFLADL

Specific function: Unknown

COG id: COG0547

COG function: function code E; Anthranilate phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anthranilate phosphoribosyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1787019, Length=123, Percent_Identity=31.7073170731707, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072 [H]

Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]

EC number: NA

Molecular weight: Translated: 38400; Mature: 38268

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIFREFLKKVGSGRHTSKDLSRVEAQSALEMMLQQEATPAQIGAFLIAHRIKRPTGIE
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
LAGFLDAYEHLGPALPAVSASSPVIVFSVPYDGRSRTAPVLPVTALILAASGCPVLLHGG
HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
DRMPTKYGVPLVDLWQGLGVDWSHRSLAQIHQVLSKYGLGFIYLPEQFPLAQGMVEFRDQ
CCCCHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
VGKRPPLATTELLWQPYLGEHHLIAGFVHPPTENMMREALALRGTDHFTTIKGLEGSCDL
HCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCC
PRDRKAILGLNHPSSEQTWQRLILSARDYDLGGPEIPYTSTKTLLEQLHAVLNGQTCELM
CCCCHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
PAVLWNAGFYLWHVGISSSLNDGLQAAENLLTNGTAKQTLTQVQAFLADL
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQIFREFLKKVGSGRHTSKDLSRVEAQSALEMMLQQEATPAQIGAFLIAHRIKRPTGIE
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCH
LAGFLDAYEHLGPALPAVSASSPVIVFSVPYDGRSRTAPVLPVTALILAASGCPVLLHGG
HHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC
DRMPTKYGVPLVDLWQGLGVDWSHRSLAQIHQVLSKYGLGFIYLPEQFPLAQGMVEFRDQ
CCCCHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
VGKRPPLATTELLWQPYLGEHHLIAGFVHPPTENMMREALALRGTDHFTTIKGLEGSCDL
HCCCCCCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCC
PRDRKAILGLNHPSSEQTWQRLILSARDYDLGGPEIPYTSTKTLLEQLHAVLNGQTCELM
CCCCHHEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
PAVLWNAGFYLWHVGISSSLNDGLQAAENLLTNGTAKQTLTQVQAFLADL
HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]