| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337504
Identifier: 158337504
GI number: 158337504
Start: 4414475
End: 4415656
Strand: Direct
Name: 158337504
Synonym: AM1_4383
Alternate gene names: NA
Gene position: 4414475-4415656 (Clockwise)
Preceding gene: 158337503
Following gene: 158337509
Centisome position: 67.88
GC content: 47.46
Gene sequence:
>1182_bases ATGAGCCTTAACTTTGCATACCTTGCAGGTGGTAAATTACACCTCAAATTAGGCGATGACCCTGTTCGAACGATTGATAG CCAATTTGGGCAAGAGGTACAGGACCGGACCCTAAAACGTCAGCAGCGAAATGCTTGGAAGGATAAAAATCCTATGGCAG GCATGATCCCCCAAGCTTTCTTACAACAAATGGAAGCGATGGGAGAGGCCAAACTCCCCGTTGCCATCCGATCCGTCAGT CCTTGTAGCCCAGGTCAATTGCTTTATACTCTGGCCGTGGGGGATGTGACTGGTGTGTTTACCTTAGATGCTACGCAAGA CCAAGAACAGCGTCTATTTCATAATTCCGATTTTGCGGTTCAGCATTTGAATGTTCATCCCCAAAAAGATGAGTTTGCCT GTACCGTTATGCACAAAGATGGTTCCGCAAATATTGCGGTGATGCCGATTGATGGGGCCAGACCCAAAGAGATCACTGCT GGAGACTCTATTGATTTGGCACCCCAATGGCTGTCCGGGGCTCAAAAAGCGTTAGTCTTTCAGTCTGCCGGTATTGCCCG CAACTCAGAAGGGTTCGTCCTAGAGCAAAGTCCTTTTTCGATTGAAAAATTGGATTTTCAGTCAGGAGAAATGACTACGG TAGCAGAGAGTGACCAATTTGATTTGCTCGCTCCCAAGATGGTAGCGGATGGCTCGCTGTATTACATTCGACGCCCCTAT CAAGCTCGTCAAAAGCGGTTGAATATCTTGACCCTGCTCAAAGATATTCTTCTGATGCCGTTTCGACTCATTCAGGCGAT TTATGAATGGCTCAATGTCTTTACCCAGACCTATACGGGTAAGCCATTGGTAAAACCCGGTCAGCCCAAAATACAAGCAA AACAAGACTTGCTGATTTGGGGCAATATCATCAACACTGAAGCCGAAGCAGAGAAAAATCGACGGTTTGGAGATCAAGAT TCACCTGCCCTCGTGCCTCGATCTTGGCAACTGATCTGTCAACGCTCAGATGGTGAGGTTCAGGTAATCGGAGATGGAGT CATCTCCTATGATGTTGATGCTAATGGCGGTGTGGTTTATACCAATGGCAGCGCTATTTATGCGACCCATCCAGGCGGGG TGCCCAAGCGACTATTACGAGATCGTCCCATTGAACAAGTGGTATTGATTGCAGATCAGTAG
Upstream 100 bases:
>100_bases CAACGGCTGAGGTGTAGCTGCAGTCCCCAAGGACAAAGACTGATTGAGTTGTCAATAAAATTGCTATCGTAGATATTCAC CACATTTCATTCCTGCACCT
Downstream 100 bases:
>100_bases GGGGCTAGGCCAATTGGAATTCCTTTAAAGCTGGCTCGAAGTTTTTGTTCTCATGGCTGGGGCGACTGAGCTTGATTAAA GCAAATCGCTGTAGGGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSLNFAYLAGGKLHLKLGDDPVRTIDSQFGQEVQDRTLKRQQRNAWKDKNPMAGMIPQAFLQQMEAMGEAKLPVAIRSVS PCSPGQLLYTLAVGDVTGVFTLDATQDQEQRLFHNSDFAVQHLNVHPQKDEFACTVMHKDGSANIAVMPIDGARPKEITA GDSIDLAPQWLSGAQKALVFQSAGIARNSEGFVLEQSPFSIEKLDFQSGEMTTVAESDQFDLLAPKMVADGSLYYIRRPY QARQKRLNILTLLKDILLMPFRLIQAIYEWLNVFTQTYTGKPLVKPGQPKIQAKQDLLIWGNIINTEAEAEKNRRFGDQD SPALVPRSWQLICQRSDGEVQVIGDGVISYDVDANGGVVYTNGSAIYATHPGGVPKRLLRDRPIEQVVLIADQ
Sequences:
>Translated_393_residues MSLNFAYLAGGKLHLKLGDDPVRTIDSQFGQEVQDRTLKRQQRNAWKDKNPMAGMIPQAFLQQMEAMGEAKLPVAIRSVS PCSPGQLLYTLAVGDVTGVFTLDATQDQEQRLFHNSDFAVQHLNVHPQKDEFACTVMHKDGSANIAVMPIDGARPKEITA GDSIDLAPQWLSGAQKALVFQSAGIARNSEGFVLEQSPFSIEKLDFQSGEMTTVAESDQFDLLAPKMVADGSLYYIRRPY QARQKRLNILTLLKDILLMPFRLIQAIYEWLNVFTQTYTGKPLVKPGQPKIQAKQDLLIWGNIINTEAEAEKNRRFGDQD SPALVPRSWQLICQRSDGEVQVIGDGVISYDVDANGGVVYTNGSAIYATHPGGVPKRLLRDRPIEQVVLIADQ >Mature_392_residues SLNFAYLAGGKLHLKLGDDPVRTIDSQFGQEVQDRTLKRQQRNAWKDKNPMAGMIPQAFLQQMEAMGEAKLPVAIRSVSP CSPGQLLYTLAVGDVTGVFTLDATQDQEQRLFHNSDFAVQHLNVHPQKDEFACTVMHKDGSANIAVMPIDGARPKEITAG DSIDLAPQWLSGAQKALVFQSAGIARNSEGFVLEQSPFSIEKLDFQSGEMTTVAESDQFDLLAPKMVADGSLYYIRRPYQ ARQKRLNILTLLKDILLMPFRLIQAIYEWLNVFTQTYTGKPLVKPGQPKIQAKQDLLIWGNIINTEAEAEKNRRFGDQDS PALVPRSWQLICQRSDGEVQVIGDGVISYDVDANGGVVYTNGSAIYATHPGGVPKRLLRDRPIEQVVLIADQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43611; Mature: 43480
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNFAYLAGGKLHLKLGDDPVRTIDSQFGQEVQDRTLKRQQRNAWKDKNPMAGMIPQAF CCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LQQMEAMGEAKLPVAIRSVSPCSPGQLLYTLAVGDVTGVFTLDATQDQEQRLFHNSDFAV HHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHCCCCEEE QHLNVHPQKDEFACTVMHKDGSANIAVMPIDGARPKEITAGDSIDLAPQWLSGAQKALVF EEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEECCCCCCCCCHHHHCCCHHEEEE QSAGIARNSEGFVLEQSPFSIEKLDFQSGEMTTVAESDQFDLLAPKMVADGSLYYIRRPY ECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCEECCHHHCCCCEEEEECCH QARQKRLNILTLLKDILLMPFRLIQAIYEWLNVFTQTYTGKPLVKPGQPKIQAKQDLLIW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE GNIINTEAEAEKNRRFGDQDSPALVPRSWQLICQRSDGEVQVIGDGVISYDVDANGGVVY EEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEECCCCCEEE TNGSAIYATHPGGVPKRLLRDRPIEQVVLIADQ ECCCEEEEECCCCCHHHHHHCCCCCEEEEEECC >Mature Secondary Structure SLNFAYLAGGKLHLKLGDDPVRTIDSQFGQEVQDRTLKRQQRNAWKDKNPMAGMIPQAF CCEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LQQMEAMGEAKLPVAIRSVSPCSPGQLLYTLAVGDVTGVFTLDATQDQEQRLFHNSDFAV HHHHHHCCCCCCCEEEECCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHCCCCEEE QHLNVHPQKDEFACTVMHKDGSANIAVMPIDGARPKEITAGDSIDLAPQWLSGAQKALVF EEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCEECCCCCCCCCHHHHCCCHHEEEE QSAGIARNSEGFVLEQSPFSIEKLDFQSGEMTTVAESDQFDLLAPKMVADGSLYYIRRPY ECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCEECCHHHCCCCEEEEECCH QARQKRLNILTLLKDILLMPFRLIQAIYEWLNVFTQTYTGKPLVKPGQPKIQAKQDLLIW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE GNIINTEAEAEKNRRFGDQDSPALVPRSWQLICQRSDGEVQVIGDGVISYDVDANGGVVY EEEECCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEEEEEECCCCCEEE TNGSAIYATHPGGVPKRLLRDRPIEQVVLIADQ ECCCEEEEECCCCCHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA