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The map label for this gene is 158337491

Identifier: 158337491

GI number: 158337491

Start: 4399915

End: 4401501

Strand: Reverse

Name: 158337491

Synonym: AM1_4370

Alternate gene names: NA

Gene position: 4401501-4399915 (Counterclockwise)

Preceding gene: 158337492

Following gene: 158337484

Centisome position: 67.68

GC content: 46.31

Gene sequence:

>1587_bases
ATGAACAATCCTCGAATCCTATACATTCGTCTACCTTGTAATCCCATTTTTCCCATTGGGGTCGTTTACCTCGCCGATCA
TATTCACAAATGTCTACCTCATGTCGAGCAACGTATCTTTGATTTAGGCACCGTCCCTCCCCTGGACTTCAAGCCAGCAT
TGGATCGCTGTATAGATGACTTCCAGCCTGATCTCCTTGTTTTTTCCTGGCGAGACATCCAAATTTACGCTCCTGTAGGT
GGTAGAGGTGGCAATCCCCTACAACATGCCTTTGAGCTGTACTACGGTAAAAACCCTTGGACAAAGCTCAAAGGTGCTTT
TGGTGGATTAAGGGTGTTTATTGCCTACTACGCAGAGTTATGGAGAAATTCAGGGCTAATCAAGCGAGGACTCAAGCGAG
CCCAGCGATATCATTCTGAAGCTCAGACGGTAGTTGGAGGTGGTGCAGTCAGCGTTTTTTATGAACAGTTAGGAACTCAG
CTGCCGAAAGGGAGCATTGTCTCTGTGGGCGAGGGAGAGGTCCTATTAGAGAAACTGTTGACAGGGCAAGAATTTCGAGA
TGAACGATGCTATGTAGTAGGCGAGAAAGCTCCCCGAGATCGCATGATCCATGAATGGCCCACCGAGATCGACAAAACGG
CCTGCGATTATCCATACATTGCGAGTATTTGGCCTGATTTTGAATATTATTTTGAGTCTCAAGACTTCTACATGGGTGTT
CAAACCAAGCGAGGATGCCCTCACAACTGTTGCTATTGCGTCTACACCGTCATTGAAGGTAAGCGCGTCCGAGTCAATCC
CGCTGAAGAAGTCGTTGCTGAAATGCAGCAGCTGTACAATCGCGGCATTCGTAACTTCTGGTTTACCGACGCTCAATTCA
TCCCAGCACGACGATATATTCCTGACGCGATTGAGTTACTACAAAAAATCATCGATGCTGGTTTGACCGACATTCATTGG
GCTGCCTATATTCGCGCTGACAATCTCACCCCTGAACTCTGTGATCTGATGGTCAAAACAGGGATGAATTATTTTGAGAT
TGGGATCACCAGTGGCTCTCAAGAACTGGTTCGCAAAATGCGGATGGGATATAACTTACGAACCGTGCTGCAAAACTGCC
GAGATCTAAAAACGGCTGGCTTCAATGATTTAGTCTCTGTCAATTATTCTTTCAATGTCATCGATGAGCGTCCAGAAACG
ATTCGCCAGACAATTGCCTATCATCGAGAACTAGAAAAGATCTTTGGAGCAGATAAGGTCGAACCAGCCATTTTTTTTAT
TGGCCTACAACCCCATACCCATCTCGAAGAATATGCCTTTGACAACAATATTTTGAAGCCTGGCTATAACCCCATGAGTC
TCATGCCTTGGACGGCCAAGAAATTGCTTTGGAATCCTGAGCCCATGGGTTCGGTATTTGGAGAAGTATGTCTCCAAGCT
TGGAAGCAAAGTCCCAATGATTTTGGGCGAGAGGTGATGAATATTTTGGAACAGCGTTTTGGTCGCGCTCCCTTGAATGA
AGCTTTGACAGCCACCATTGAACCCAAAAAGCGATCACTGGCAACAGCTAGCCGAATGGGCTCATAA

Upstream 100 bases:

>100_bases
CATCGGTCTAGACAAACACTCTAGGGCAACTCAGTACTATGATTAAGATATATAACCTAGGTGTTAATCACCTTATACCT
TAACGTTCTCTCAAGGCGTG

Downstream 100 bases:

>100_bases
GCATCCTTTCAGAAGGATGTTTGACGCACAGTTCAACAGATAGATCTTGCTACACATAGAAACCCCTCACCTATTTCCAG
ATGAGGGGTTTTATTTGAAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 528

Protein sequence:

>528_residues
MNNPRILYIRLPCNPIFPIGVVYLADHIHKCLPHVEQRIFDLGTVPPLDFKPALDRCIDDFQPDLLVFSWRDIQIYAPVG
GRGGNPLQHAFELYYGKNPWTKLKGAFGGLRVFIAYYAELWRNSGLIKRGLKRAQRYHSEAQTVVGGGAVSVFYEQLGTQ
LPKGSIVSVGEGEVLLEKLLTGQEFRDERCYVVGEKAPRDRMIHEWPTEIDKTACDYPYIASIWPDFEYYFESQDFYMGV
QTKRGCPHNCCYCVYTVIEGKRVRVNPAEEVVAEMQQLYNRGIRNFWFTDAQFIPARRYIPDAIELLQKIIDAGLTDIHW
AAYIRADNLTPELCDLMVKTGMNYFEIGITSGSQELVRKMRMGYNLRTVLQNCRDLKTAGFNDLVSVNYSFNVIDERPET
IRQTIAYHRELEKIFGADKVEPAIFFIGLQPHTHLEEYAFDNNILKPGYNPMSLMPWTAKKLLWNPEPMGSVFGEVCLQA
WKQSPNDFGREVMNILEQRFGRAPLNEALTATIEPKKRSLATASRMGS

Sequences:

>Translated_528_residues
MNNPRILYIRLPCNPIFPIGVVYLADHIHKCLPHVEQRIFDLGTVPPLDFKPALDRCIDDFQPDLLVFSWRDIQIYAPVG
GRGGNPLQHAFELYYGKNPWTKLKGAFGGLRVFIAYYAELWRNSGLIKRGLKRAQRYHSEAQTVVGGGAVSVFYEQLGTQ
LPKGSIVSVGEGEVLLEKLLTGQEFRDERCYVVGEKAPRDRMIHEWPTEIDKTACDYPYIASIWPDFEYYFESQDFYMGV
QTKRGCPHNCCYCVYTVIEGKRVRVNPAEEVVAEMQQLYNRGIRNFWFTDAQFIPARRYIPDAIELLQKIIDAGLTDIHW
AAYIRADNLTPELCDLMVKTGMNYFEIGITSGSQELVRKMRMGYNLRTVLQNCRDLKTAGFNDLVSVNYSFNVIDERPET
IRQTIAYHRELEKIFGADKVEPAIFFIGLQPHTHLEEYAFDNNILKPGYNPMSLMPWTAKKLLWNPEPMGSVFGEVCLQA
WKQSPNDFGREVMNILEQRFGRAPLNEALTATIEPKKRSLATASRMGS
>Mature_528_residues
MNNPRILYIRLPCNPIFPIGVVYLADHIHKCLPHVEQRIFDLGTVPPLDFKPALDRCIDDFQPDLLVFSWRDIQIYAPVG
GRGGNPLQHAFELYYGKNPWTKLKGAFGGLRVFIAYYAELWRNSGLIKRGLKRAQRYHSEAQTVVGGGAVSVFYEQLGTQ
LPKGSIVSVGEGEVLLEKLLTGQEFRDERCYVVGEKAPRDRMIHEWPTEIDKTACDYPYIASIWPDFEYYFESQDFYMGV
QTKRGCPHNCCYCVYTVIEGKRVRVNPAEEVVAEMQQLYNRGIRNFWFTDAQFIPARRYIPDAIELLQKIIDAGLTDIHW
AAYIRADNLTPELCDLMVKTGMNYFEIGITSGSQELVRKMRMGYNLRTVLQNCRDLKTAGFNDLVSVNYSFNVIDERPET
IRQTIAYHRELEKIFGADKVEPAIFFIGLQPHTHLEEYAFDNNILKPGYNPMSLMPWTAKKLLWNPEPMGSVFGEVCLQA
WKQSPNDFGREVMNILEQRFGRAPLNEALTATIEPKKRSLATASRMGS

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 60560; Mature: 60560

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPRILYIRLPCNPIFPIGVVYLADHIHKCLPHVEQRIFDLGTVPPLDFKPALDRCIDD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
FQPDLLVFSWRDIQIYAPVGGRGGNPLQHAFELYYGKNPWTKLKGAFGGLRVFIAYYAEL
CCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
WRNSGLIKRGLKRAQRYHSEAQTVVGGGAVSVFYEQLGTQLPKGSIVSVGEGEVLLEKLL
HHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH
TGQEFRDERCYVVGEKAPRDRMIHEWPTEIDKTACDYPYIASIWPDFEYYFESQDFYMGV
CCCCCCCCCEEEECCCCCCCCCHHHCCHHHHHHCCCCCCHHHHCCCHHHHCCCCCEEEEC
QTKRGCPHNCCYCVYTVIEGKRVRVNPAEEVVAEMQQLYNRGIRNFWFTDAQFIPARRYI
CCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHCC
PDAIELLQKIIDAGLTDIHWAAYIRADNLTPELCDLMVKTGMNYFEIGITSGSQELVRKM
CHHHHHHHHHHHCCCCHHEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
RMGYNLRTVLQNCRDLKTAGFNDLVSVNYSFNVIDERPETIRQTIAYHRELEKIFGADKV
HHCCCHHHHHHHHHHHHHCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
EPAIFFIGLQPHTHLEEYAFDNNILKPGYNPMSLMPWTAKKLLWNPEPMGSVFGEVCLQA
CCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
WKQSPNDFGREVMNILEQRFGRAPLNEALTATIEPKKRSLATASRMGS
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure
MNNPRILYIRLPCNPIFPIGVVYLADHIHKCLPHVEQRIFDLGTVPPLDFKPALDRCIDD
CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
FQPDLLVFSWRDIQIYAPVGGRGGNPLQHAFELYYGKNPWTKLKGAFGGLRVFIAYYAEL
CCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
WRNSGLIKRGLKRAQRYHSEAQTVVGGGAVSVFYEQLGTQLPKGSIVSVGEGEVLLEKLL
HHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH
TGQEFRDERCYVVGEKAPRDRMIHEWPTEIDKTACDYPYIASIWPDFEYYFESQDFYMGV
CCCCCCCCCEEEECCCCCCCCCHHHCCHHHHHHCCCCCCHHHHCCCHHHHCCCCCEEEEC
QTKRGCPHNCCYCVYTVIEGKRVRVNPAEEVVAEMQQLYNRGIRNFWFTDAQFIPARRYI
CCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHCC
PDAIELLQKIIDAGLTDIHWAAYIRADNLTPELCDLMVKTGMNYFEIGITSGSQELVRKM
CHHHHHHHHHHHCCCCHHEEEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHH
RMGYNLRTVLQNCRDLKTAGFNDLVSVNYSFNVIDERPETIRQTIAYHRELEKIFGADKV
HHCCCHHHHHHHHHHHHHCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC
EPAIFFIGLQPHTHLEEYAFDNNILKPGYNPMSLMPWTAKKLLWNPEPMGSVFGEVCLQA
CCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHH
WKQSPNDFGREVMNILEQRFGRAPLNEALTATIEPKKRSLATASRMGS
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]