Click here to switch to the map view.

The map label for this gene is 158337483

Identifier: 158337483

GI number: 158337483

Start: 4391298

End: 4392653

Strand: Reverse

Name: 158337483

Synonym: AM1_4362

Alternate gene names: NA

Gene position: 4392653-4391298 (Counterclockwise)

Preceding gene: 158337484

Following gene: 158337482

Centisome position: 67.54

GC content: 51.11

Gene sequence:

>1356_bases
GTGAACATCCGAAAAATCCTGCACCTATTCATTCACCCCTGGCGAATTGGAGCCGTTGCAGGTATTCCCCTTTATGCAGA
TCTGACTTGCTTAGTTGCGATTGCCCTTGGGTCGATGTATTTGGCTCGGATGAGTCAAGCCTTTCACCCCGAATTGGGTC
TAGCTATCGGCGTCATTGTCAGCTTTGCCCTACCCCTCTCCATCTTTATCCATGAGATGAGTCGAGCCCTGGCAGCGAAG
CATTATCAAATCTCGGTCCAAGGGGTTTACATTCGGGGGCTGGGATCCGTCGCTAAGACCGATCAGACCTTTGCCCATCC
CTTGCAAATGCTAGAAGTTTACTTTGCAGGAACCCTGGTGAACTTTATCTTATATGCAGGCCTCAATCTACTCGGCAACT
TATCCTTGAACCTGGGAGGGACGGCGATTATTTCTTTGAATCACATCAAAGAATTTAACTTCGTCCTAGCCATGTTTTCT
CTGGTCCCCCTCGTGCCCCTGAATGGTGGCTATATTTTCAGGGGGCTGCAGTGGGAGTGGACCCGCAAGCAACATCCCCT
AGCGGGCCATGATGTCTACGGGGCTTATATTGCAGGTGGCGCAGCGATTGCCCTGGGTTTGATCTGGTATGGTAATCGGC
CTTTTTTAGGGGTATGGATGCTGTACTTGGGACTCATGACTTGCCTCAGATACCTCCTTTTTGAGGGAGAGTTTTTGCCT
CTCTCGGTGGAGCAGCGGCCCCCTAGGCCATTGGCAACGGCCACAGCGAATATCCCGACAACGGCCGCCTCCCGTTCTCC
TGCCCCACCAGCCCGATCGACCGCTACAAAGCCCGCTATCCGACCTTTAGACTTCAATTATTTAAATGCGGAGTTCTTGT
CGGTGACTGAACCAGATCAGCAATTCCAGCAAGGGTTAGACTCCACCCAAGAAATGCGGTTACAAAATGCGATCGCATCT
TTCAATGCCATTCTGGAGAAAGCCCCCAATAATGCCTCTGCACTCCACAATCGAGGCAATGCTTACCTACAACTGGGGAA
AAAGCAAGCGGCCCTCAGTGATTTTCAGGCAGCTCTCCATCTGAAAACCGACGTCCTAGAGATCTATTTTGGTAAGGGCA
ATGCCCACTTTGCTCTAGGGGATTTTCAGGGGGCGATTATGGAATACTCCGAAATTCTTAAACGAGATCCCGACCATGCC
CGGGCTTATTTCAATCGGGCCAGTGCCCAAGTGTTGAACGGCAATCGTCAGGCCGCCATTGCGGATTTCAAGCAGGCGCA
TACCCTGTTTGCCGCTATTGCAGATCAAACCCATACCTGCAAGATTGACCGACGTTTGCAGATTTTAACCCCATGA

Upstream 100 bases:

>100_bases
CAAGCCATAGAGCACCTGAGCTTGGTTCCATGACATCTATGCATACCCCTCAGCGATCGCATCTAGCGTATCGCTGTTTT
ATTGACTTGCCTATCACAGC

Downstream 100 bases:

>100_bases
GCGCTCACCCGCTTGCTTAAAGCCCCGGCTCCAGTGAACAATAGGGAATGTAAGTTAGATGAATAATCATCTAACCCGCC
GAATTGATTCCTGATCGGGA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MNIRKILHLFIHPWRIGAVAGIPLYADLTCLVAIALGSMYLARMSQAFHPELGLAIGVIVSFALPLSIFIHEMSRALAAK
HYQISVQGVYIRGLGSVAKTDQTFAHPLQMLEVYFAGTLVNFILYAGLNLLGNLSLNLGGTAIISLNHIKEFNFVLAMFS
LVPLVPLNGGYIFRGLQWEWTRKQHPLAGHDVYGAYIAGGAAIALGLIWYGNRPFLGVWMLYLGLMTCLRYLLFEGEFLP
LSVEQRPPRPLATATANIPTTAASRSPAPPARSTATKPAIRPLDFNYLNAEFLSVTEPDQQFQQGLDSTQEMRLQNAIAS
FNAILEKAPNNASALHNRGNAYLQLGKKQAALSDFQAALHLKTDVLEIYFGKGNAHFALGDFQGAIMEYSEILKRDPDHA
RAYFNRASAQVLNGNRQAAIADFKQAHTLFAAIADQTHTCKIDRRLQILTP

Sequences:

>Translated_451_residues
MNIRKILHLFIHPWRIGAVAGIPLYADLTCLVAIALGSMYLARMSQAFHPELGLAIGVIVSFALPLSIFIHEMSRALAAK
HYQISVQGVYIRGLGSVAKTDQTFAHPLQMLEVYFAGTLVNFILYAGLNLLGNLSLNLGGTAIISLNHIKEFNFVLAMFS
LVPLVPLNGGYIFRGLQWEWTRKQHPLAGHDVYGAYIAGGAAIALGLIWYGNRPFLGVWMLYLGLMTCLRYLLFEGEFLP
LSVEQRPPRPLATATANIPTTAASRSPAPPARSTATKPAIRPLDFNYLNAEFLSVTEPDQQFQQGLDSTQEMRLQNAIAS
FNAILEKAPNNASALHNRGNAYLQLGKKQAALSDFQAALHLKTDVLEIYFGKGNAHFALGDFQGAIMEYSEILKRDPDHA
RAYFNRASAQVLNGNRQAAIADFKQAHTLFAAIADQTHTCKIDRRLQILTP
>Mature_451_residues
MNIRKILHLFIHPWRIGAVAGIPLYADLTCLVAIALGSMYLARMSQAFHPELGLAIGVIVSFALPLSIFIHEMSRALAAK
HYQISVQGVYIRGLGSVAKTDQTFAHPLQMLEVYFAGTLVNFILYAGLNLLGNLSLNLGGTAIISLNHIKEFNFVLAMFS
LVPLVPLNGGYIFRGLQWEWTRKQHPLAGHDVYGAYIAGGAAIALGLIWYGNRPFLGVWMLYLGLMTCLRYLLFEGEFLP
LSVEQRPPRPLATATANIPTTAASRSPAPPARSTATKPAIRPLDFNYLNAEFLSVTEPDQQFQQGLDSTQEMRLQNAIAS
FNAILEKAPNNASALHNRGNAYLQLGKKQAALSDFQAALHLKTDVLEIYFGKGNAHFALGDFQGAIMEYSEILKRDPDHA
RAYFNRASAQVLNGNRQAAIADFKQAHTLFAAIADQTHTCKIDRRLQILTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 49673; Mature: 49673

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRKILHLFIHPWRIGAVAGIPLYADLTCLVAIALGSMYLARMSQAFHPELGLAIGVIV
CCHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SFALPLSIFIHEMSRALAAKHYQISVQGVYIRGLGSVAKTDQTFAHPLQMLEVYFAGTLV
HHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHH
NFILYAGLNLLGNLSLNLGGTAIISLNHIKEFNFVLAMFSLVPLVPLNGGYIFRGLQWEW
HHHHHHHHHHHCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEE
TRKQHPLAGHDVYGAYIAGGAAIALGLIWYGNRPFLGVWMLYLGLMTCLRYLLFEGEFLP
CCCCCCCCCCCCCHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
LSVEQRPPRPLATATANIPTTAASRSPAPPARSTATKPAIRPLDFNYLNAEFLSVTEPDQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCHH
QFQQGLDSTQEMRLQNAIASFNAILEKAPNNASALHNRGNAYLQLGKKQAALSDFQAALH
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHH
LKTDVLEIYFGKGNAHFALGDFQGAIMEYSEILKRDPDHARAYFNRASAQVLNGNRQAAI
HHEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHH
ADFKQAHTLFAAIADQTHTCKIDRRLQILTP
HHHHHHHHHHHHHHCCCCEEEECCEEEECCC
>Mature Secondary Structure
MNIRKILHLFIHPWRIGAVAGIPLYADLTCLVAIALGSMYLARMSQAFHPELGLAIGVIV
CCHHHHHHHHHCCHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SFALPLSIFIHEMSRALAAKHYQISVQGVYIRGLGSVAKTDQTFAHPLQMLEVYFAGTLV
HHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHH
NFILYAGLNLLGNLSLNLGGTAIISLNHIKEFNFVLAMFSLVPLVPLNGGYIFRGLQWEW
HHHHHHHHHHHCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEE
TRKQHPLAGHDVYGAYIAGGAAIALGLIWYGNRPFLGVWMLYLGLMTCLRYLLFEGEFLP
CCCCCCCCCCCCCHHHHHCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
LSVEQRPPRPLATATANIPTTAASRSPAPPARSTATKPAIRPLDFNYLNAEFLSVTEPDQ
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEECCCCHH
QFQQGLDSTQEMRLQNAIASFNAILEKAPNNASALHNRGNAYLQLGKKQAALSDFQAALH
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHH
LKTDVLEIYFGKGNAHFALGDFQGAIMEYSEILKRDPDHARAYFNRASAQVLNGNRQAAI
HHEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHH
ADFKQAHTLFAAIADQTHTCKIDRRLQILTP
HHHHHHHHHHHHHHCCCCEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]