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The map label for this gene is 158337428

Identifier: 158337428

GI number: 158337428

Start: 4327588

End: 4329738

Strand: Reverse

Name: 158337428

Synonym: AM1_4307

Alternate gene names: NA

Gene position: 4329738-4327588 (Counterclockwise)

Preceding gene: 158337429

Following gene: 158337425

Centisome position: 66.57

GC content: 49.79

Gene sequence:

>2151_bases
GTGGCTGTGCTGGACACAACACCCGATCAGGGAGACATCTTATTCAATTCTTTGCGCAAACTCACTGTTATTGAACCCTT
TCCTGCCCGGGGCGAGAAAGCCGTGAATGTCCACGAGTCTGCTCGCCTTACCTTGCGGGATTATTTGCGGAAGACAGATC
CCGCTCGCTGGCTTTTGTTGTCCACCAATGCTCGGAATTACTTAAACGAGCGTACAGAAGTTCATGCTCGGATCGAAGCA
CTCTACCACTTGTTTGCAACCGATCAAATAGCTGCTGCAGCCGAATGCGAACTGCTAACTCAGGAAATCACATGCTCTAT
GCAGCCTGAGAATACTACTGCACTCTCCCTAGCTCTGGAGGAACTAGCTAATGCCGGCTGGCTCAAAGGAAAAGCCCGAG
TGGAAGCACTACTAGCTACTTTTGAAGTTCGCAGTTTGCGCGGGGACACCGCCCAACTTGAGGATCAAGCGCTTCAAGTT
GTGAATCTTGCTCATGCAGCATCCCATCAATCGGGGATTGCCCGGGCACAGCGCCTTCTAGGAGACATCTACCAAACTAA
AGGACGACTGGATGATGCACTCCAAGCATTCAATGAATACCTCTCTATCTGTCAGAACCTGACTTCAGCCGATCCATCTA
ACGCAGCATGGCAAAGTGATCTCGCTGTCGCACATGCGAGGACCGGAGACATCTACCAAACCAAAGGACGACTGGATGAT
GCACTCCAAGCATTCAATGAATACCTCTTTATCTGTCAGAATCTGACTTCAGCCGATCCGTCTAACGCAGCATGGCAGCG
TGAACTCGGTGTCGCATATTCGAAGACCGGAGACATCTACCAAACCAAAGGACGACTGGATGATGCACTCCAAGCATTCA
ATGAATACCTCTCTATCTGTCAGAACCTGACTTCAGCCGATCCGTCTAACGCAGCATGGCAACGTGAACTCGGCATCGCG
TATTCGAGGACTGGAGACATCTACCAAACTAAAGGACGACTGGATGATGCACTCCAAGCATTCAATGAAGACCTCTCTAT
CTGTCAGAATCTGACTTCAGCCGATCCGTCTAACGCAGCATGGCAGCGTGAACTCGGTGTCGCATATTCGAGGACCGGAG
ACATTTACCAAACCAAAGGACGACTGGATGATGCACTCCAAGCATTCAATGAAGACCTCTCTATCTGTCAGAACCTGACT
TCAGCCGATCCGTCTAACGCAGCATGGCAAAGTGATCTCGCTGTCGCGCATGCGAGGACCGGAGACATCTACCAAACCAA
AGGACGACTAGATGATGCACTCCAAGCATTCAATGAATACCTCTCTATCTTTCAGAACCTGACTTCAGCCGATCCGTCTA
ACGCAGAATGGCAGCGTGAACTCGGTGTCGCATATTCGAAGATCGGAGACATCTACCAAACCAAAAGACGACTGGATGAT
GCGCTCCAAGCATTCAATGAATACCTCTCTATCTGTCAGAACCTGACTTCAGCCGATCCATCTAACGCAGCATGGCAACG
TGAACTCGGCATCGCATATTCGAGGACCGGAGACATCTACCAAACTAAAGGACGACTAGATGATGCACTCCAAGCATTCA
ATGAATACCTCTCTATCTGTCAGAATCTGACTTCGGCCGATCCGTCTAACGCAGCATGGCAGCGTGAACTCGGCATCGCG
TATTCGAAGATCGGAGACATCTACCAAACTAAAGGACGACTGGATGATGCGCTCCAAGCATTCAATGAATACCTCTCTAT
CTGTCAGAATCTGACTTCAGCCGATCCGTCTAACGCAGAATGGCAGCGTGAACTCGGTGTCGCATATTCGAGGACCGGAG
ACATCTACCAAACCAAAGGACGACTGGATGATGCACTCCAAGCATTCAATGAAGACCTCTCTATCTGTCAGAATCTGACT
TCAGCCGATCCGTCTAACGCAGAATGGCAGAGTGATCTCGCTGTCGCGTATTCGAAGACCGGAGACATCTACCAAACTAA
AGGACGACTGGATGATGCACTCCAAGCATTCAATGAATACCTCTCTATCTGTCAGAACCTGACTTCAGCCGATCCATCTA
ACGCAGAATGGCAGCATGATCTCGCTGTCGCGCATTCGAAAATCGTAGCCATCTATGAGGCCCTCCAATAG

Upstream 100 bases:

>100_bases
CGATTTAGCCCATTCCCCGCTTTCTGAATCACGGCGCCTATCAATTAAAAAGGCATTAATCGCTGCTGCCATACCACACT
GGTGCGATTGCGACCTCCTT

Downstream 100 bases:

>100_bases
TATTGCCTGCAGTTTTAGAATTTGCGATTGACGTTCTCGTGGACAATACAGACTAATTGCTAGCTTTAAACTCTCACGAT
TAATGCTGATGACAACACAG

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Peptidase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Transcriptional Regulator; TPR Domain-Containing Protein; TPR Repeat Protein; SLEI Family; SEFIR Domain Protein; Sulfotransferase; Tetratricopeptide TPR2 Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Signal Transduction Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Domain Protein; Copper Amine Oxidase Domain Protein

Number of amino acids: Translated: 716; Mature: 715

Protein sequence:

>716_residues
MAVLDTTPDQGDILFNSLRKLTVIEPFPARGEKAVNVHESARLTLRDYLRKTDPARWLLLSTNARNYLNERTEVHARIEA
LYHLFATDQIAAAAECELLTQEITCSMQPENTTALSLALEELANAGWLKGKARVEALLATFEVRSLRGDTAQLEDQALQV
VNLAHAASHQSGIARAQRLLGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQSDLAVAHARTGDIYQTKGRLDD
ALQAFNEYLFICQNLTSADPSNAAWQRELGVAYSKTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQRELGIA
YSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAAWQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLT
SADPSNAAWQSDLAVAHARTGDIYQTKGRLDDALQAFNEYLSIFQNLTSADPSNAEWQRELGVAYSKIGDIYQTKRRLDD
ALQAFNEYLSICQNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQRELGIA
YSKIGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLT
SADPSNAEWQSDLAVAYSKTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQHDLAVAHSKIVAIYEALQ

Sequences:

>Translated_716_residues
MAVLDTTPDQGDILFNSLRKLTVIEPFPARGEKAVNVHESARLTLRDYLRKTDPARWLLLSTNARNYLNERTEVHARIEA
LYHLFATDQIAAAAECELLTQEITCSMQPENTTALSLALEELANAGWLKGKARVEALLATFEVRSLRGDTAQLEDQALQV
VNLAHAASHQSGIARAQRLLGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQSDLAVAHARTGDIYQTKGRLDD
ALQAFNEYLFICQNLTSADPSNAAWQRELGVAYSKTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQRELGIA
YSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAAWQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLT
SADPSNAAWQSDLAVAHARTGDIYQTKGRLDDALQAFNEYLSIFQNLTSADPSNAEWQRELGVAYSKIGDIYQTKRRLDD
ALQAFNEYLSICQNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQRELGIA
YSKIGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLT
SADPSNAEWQSDLAVAYSKTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQHDLAVAHSKIVAIYEALQ
>Mature_715_residues
AVLDTTPDQGDILFNSLRKLTVIEPFPARGEKAVNVHESARLTLRDYLRKTDPARWLLLSTNARNYLNERTEVHARIEAL
YHLFATDQIAAAAECELLTQEITCSMQPENTTALSLALEELANAGWLKGKARVEALLATFEVRSLRGDTAQLEDQALQVV
NLAHAASHQSGIARAQRLLGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQSDLAVAHARTGDIYQTKGRLDDA
LQAFNEYLFICQNLTSADPSNAAWQRELGVAYSKTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQRELGIAY
SRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAAWQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTS
ADPSNAAWQSDLAVAHARTGDIYQTKGRLDDALQAFNEYLSIFQNLTSADPSNAEWQRELGVAYSKIGDIYQTKRRLDDA
LQAFNEYLSICQNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQRELGIAY
SKIGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTS
ADPSNAEWQSDLAVAYSKTGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQHDLAVAHSKIVAIYEALQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=594, Percent_Identity=24.0740740740741, Blast_Score=84, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115532690, Length=444, Percent_Identity=21.1711711711712, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=444, Percent_Identity=21.1711711711712, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79426; Mature: 79295

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLDTTPDQGDILFNSLRKLTVIEPFPARGEKAVNVHESARLTLRDYLRKTDPARWLLL
CCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCEECHHHHHHHHHHHHHHHCCCCEEEEE
STNARNYLNERTEVHARIEALYHLFATDQIAAAAECELLTQEITCSMQPENTTALSLALE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
ELANAGWLKGKARVEALLATFEVRSLRGDTAQLEDQALQVVNLAHAASHQSGIARAQRLL
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQSDLAVAHARTGDIYQTKGRLDD
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCHHHH
ALQAFNEYLFICQNLTSADPSNAAWQRELGVAYSKTGDIYQTKGRLDDALQAFNEYLSIC
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
QNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAA
HHHCCCCCCCCHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
WQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAAWQSDLAVAHART
HHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
GDIYQTKGRLDDALQAFNEYLSIFQNLTSADPSNAEWQRELGVAYSKIGDIYQTKRRLDD
CCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALQAFNEYLSICQNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEYLSIC
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
QNLTSADPSNAAWQRELGIAYSKIGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
WQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAEWQSDLAVAYSKT
HHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
GDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQHDLAVAHSKIVAIYEALQ
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AVLDTTPDQGDILFNSLRKLTVIEPFPARGEKAVNVHESARLTLRDYLRKTDPARWLLL
CCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCEECHHHHHHHHHHHHHHHCCCCEEEEE
STNARNYLNERTEVHARIEALYHLFATDQIAAAAECELLTQEITCSMQPENTTALSLALE
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHH
ELANAGWLKGKARVEALLATFEVRSLRGDTAQLEDQALQVVNLAHAASHQSGIARAQRLL
HHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAAWQSDLAVAHARTGDIYQTKGRLDD
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCHHHH
ALQAFNEYLFICQNLTSADPSNAAWQRELGVAYSKTGDIYQTKGRLDDALQAFNEYLSIC
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHHH
QNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAA
HHHCCCCCCCCHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
WQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAAWQSDLAVAHART
HHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
GDIYQTKGRLDDALQAFNEYLSIFQNLTSADPSNAEWQRELGVAYSKIGDIYQTKRRLDD
CCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALQAFNEYLSICQNLTSADPSNAAWQRELGIAYSRTGDIYQTKGRLDDALQAFNEYLSIC
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHH
QNLTSADPSNAAWQRELGIAYSKIGDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAE
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
WQRELGVAYSRTGDIYQTKGRLDDALQAFNEDLSICQNLTSADPSNAEWQSDLAVAYSKT
HHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
GDIYQTKGRLDDALQAFNEYLSICQNLTSADPSNAEWQHDLAVAHSKIVAIYEALQ
CCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA