| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158337384
Identifier: 158337384
GI number: 158337384
Start: 4280944
End: 4281309
Strand: Reverse
Name: 158337384
Synonym: AM1_4263
Alternate gene names: NA
Gene position: 4281309-4280944 (Counterclockwise)
Preceding gene: 158337386
Following gene: 158337383
Centisome position: 65.83
GC content: 49.73
Gene sequence:
>366_bases GTGGGAATGGTTCGAGTCGTTCAAGCGGAGACCTTAGATGAGGATGCCAGCCTAGAGAAGATAGAGAAGGCTCACGCCGA GGCCTTACGGGTGGCTGACTTAGAAAACCTGATGTCGAGTAATGTTGACGTGCCCGATGCCAGGGGGACCTATTCGGACT ATTACGAAATTACTTCAGAGGTCGATGATTTAATTGTTTATTTTAGGGCCAAGCCAAAGTATGAGCGGGTACATGGGTAC ACCTCGTTCATGAGAGTTCCCCATTTAGGTGTTTGGTCAGCGGTCTCTGGTATGTGCAAGTCAACAGACTTGGGAGACTC AGCCCCGAACCCGACTGTCATCAAAGGGGATTACTCTTGTCGTTAG
Upstream 100 bases:
>100_bases GATAGGTGGGAGTTTATTAAGTTCTGGTGGTCCTTTATGTGAGCGAACGATAGAGGACGAGGGCTGCAAGGGTATAGAGA AGTCAGTCAAGAGTCACCTT
Downstream 100 bases:
>100_bases TCTGCTATCGGGATTCCGATATCTGGATCAGTGGGAAGCTGAGCTACAAGCTGAGGTTACTGCGTAATCCGGCTTAAAAC CGAGAAACACAGCTGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MGMVRVVQAETLDEDASLEKIEKAHAEALRVADLENLMSSNVDVPDARGTYSDYYEITSEVDDLIVYFRAKPKYERVHGY TSFMRVPHLGVWSAVSGMCKSTDLGDSAPNPTVIKGDYSCR
Sequences:
>Translated_121_residues MGMVRVVQAETLDEDASLEKIEKAHAEALRVADLENLMSSNVDVPDARGTYSDYYEITSEVDDLIVYFRAKPKYERVHGY TSFMRVPHLGVWSAVSGMCKSTDLGDSAPNPTVIKGDYSCR >Mature_120_residues GMVRVVQAETLDEDASLEKIEKAHAEALRVADLENLMSSNVDVPDARGTYSDYYEITSEVDDLIVYFRAKPKYERVHGYT SFMRVPHLGVWSAVSGMCKSTDLGDSAPNPTVIKGDYSCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13482; Mature: 13351
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMVRVVQAETLDEDASLEKIEKAHAEALRVADLENLMSSNVDVPDARGTYSDYYEITSE CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VDDLIVYFRAKPKYERVHGYTSFMRVPHLGVWSAVSGMCKSTDLGDSAPNPTVIKGDYSC HHHEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCC R C >Mature Secondary Structure GMVRVVQAETLDEDASLEKIEKAHAEALRVADLENLMSSNVDVPDARGTYSDYYEITSE CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VDDLIVYFRAKPKYERVHGYTSFMRVPHLGVWSAVSGMCKSTDLGDSAPNPTVIKGDYSC HHHEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA