Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337357

Identifier: 158337357

GI number: 158337357

Start: 4254514

End: 4254993

Strand: Reverse

Name: 158337357

Synonym: AM1_4235

Alternate gene names: NA

Gene position: 4254993-4254514 (Counterclockwise)

Preceding gene: 158337365

Following gene: 158337355

Centisome position: 65.42

GC content: 48.75

Gene sequence:

>480_bases
ATGAGATTGACCTTTTCGCCTCAATCATTGTTCACTTGGAACTATTGGGTTACGGGGCAAGATATCATTGGTGCGATTGA
ATTTAACGTTGGCAAGGACTCAGGCCAAATTGTTCTGGGGTCTACAGCCTATGCCATCCACCAGGATTCGCAGTCTGGAG
AGTGGCGACTGTTAGCCAACAACACGGTTCAAGCATCCGCCTGCAGGTTCGGATCGAATACCCATAGTTTTGAGGTCACC
TACGGACATCAACGCCTTTCTTTGCGGTCAGGACGCTTTGGGGGCACAGCACTCACCATTCATCGGCAAGATGGTACCCT
GCTAGGAGACATTCGCCCCAACTCTCTTGTGAACCGCAAAGCTAAATTACATTGTTCACCTGAAATTGGTGTCTTAATTC
AACTCTTTCTGTTTTGGCTAACGGCGTTAATGTGGCAACGCACTTCTCACCCCCATGCATACTTCAGGAGTGGTTGCTGA

Upstream 100 bases:

>100_bases
AGAGCAACTAAATCAGCCTTTTACCCTTGACGGACAGGCAAAGATTGACCGTCAAGGGTCGCTTTGAATCCTTTCTTGTA
ACTGTGTTCTGGAGTCCTCC

Downstream 100 bases:

>100_bases
GATGCTAAGCAGGTCAGTCCTTATCGCTGTTGTTGCGACCAGACCCGAGTTGGTAGCCCCCAAACGTAGATAAATCCTTC
AGCAGCTTTGTGATCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRLTFSPQSLFTWNYWVTGQDIIGAIEFNVGKDSGQIVLGSTAYAIHQDSQSGEWRLLANNTVQASACRFGSNTHSFEVT
YGHQRLSLRSGRFGGTALTIHRQDGTLLGDIRPNSLVNRKAKLHCSPEIGVLIQLFLFWLTALMWQRTSHPHAYFRSGC

Sequences:

>Translated_159_residues
MRLTFSPQSLFTWNYWVTGQDIIGAIEFNVGKDSGQIVLGSTAYAIHQDSQSGEWRLLANNTVQASACRFGSNTHSFEVT
YGHQRLSLRSGRFGGTALTIHRQDGTLLGDIRPNSLVNRKAKLHCSPEIGVLIQLFLFWLTALMWQRTSHPHAYFRSGC
>Mature_159_residues
MRLTFSPQSLFTWNYWVTGQDIIGAIEFNVGKDSGQIVLGSTAYAIHQDSQSGEWRLLANNTVQASACRFGSNTHSFEVT
YGHQRLSLRSGRFGGTALTIHRQDGTLLGDIRPNSLVNRKAKLHCSPEIGVLIQLFLFWLTALMWQRTSHPHAYFRSGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17843; Mature: 17843

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTFSPQSLFTWNYWVTGQDIIGAIEFNVGKDSGQIVLGSTAYAIHQDSQSGEWRLLAN
CEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEEECCEEEEEECCCCCCCEEEEEC
NTVQASACRFGSNTHSFEVTYGHQRLSLRSGRFGGTALTIHRQDGTLLGDIRPNSLVNRK
CCEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCC
AKLHCSPEIGVLIQLFLFWLTALMWQRTSHPHAYFRSGC
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
>Mature Secondary Structure
MRLTFSPQSLFTWNYWVTGQDIIGAIEFNVGKDSGQIVLGSTAYAIHQDSQSGEWRLLAN
CEEEECCCCEEEEEEEEECCCEEEEEEEEECCCCCCEEECCEEEEEECCCCCCCEEEEEC
NTVQASACRFGSNTHSFEVTYGHQRLSLRSGRFGGTALTIHRQDGTLLGDIRPNSLVNRK
CCEEEEEEECCCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCC
AKLHCSPEIGVLIQLFLFWLTALMWQRTSHPHAYFRSGC
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA