| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337329
Identifier: 158337329
GI number: 158337329
Start: 4227451
End: 4228080
Strand: Direct
Name: 158337329
Synonym: AM1_4207
Alternate gene names: NA
Gene position: 4227451-4228080 (Clockwise)
Preceding gene: 158337328
Following gene: 158337332
Centisome position: 65.0
GC content: 46.51
Gene sequence:
>630_bases ATGGAGAACGTTCTAGATTGGTATGCCCAACCCTACGATCCTGATGAGCCTGTTGTTTGTTTTGATGAACGGCCTTGCCA ACTGATTGGCGAAACCCGGGTGCCCCGTCCATCGAAGCCCGGTCGTCCTCAACGCTACGACCATGAATACGAGCGGAAGG GCACTTGTAATATATTTGGCTTTTTTCAACCGCTCAAAAGTTGGCGACATTTGAAGGTGACTGAGCATCGAAAAAGTGAG GACTTTGGGGTGTGCATGCAGTATCTAGTGGATGGTCTGTTTCCTGATGCTCAACAAGTGCACGTTGTCTTAGACAATCT CAACACCCATACTCCCGCTGCACTCTACAAAACCTTCAAACCTGATGAAGCTTTGAGGATTCTCAGTCGCATTCAGTTTC ACTACACTCCAAAACATGGTAGTTGGCTCAATATGGTTGAGTTTGAGTTTTCGGCTCTTTCTAGGCAGTGCTTAAATCGA CGAATTCCTGATATTGAAAAACTCCGGCATGAGGTCACCGCATGGGAACAAAGGCGTAACTGGGATAAAGCGATGGTTAA TTGGTTATTTACAGTGGATGATGCACGAACTAAACTCAGCCGACTCTATCCCCAAACTACCCTGTCATAA
Upstream 100 bases:
>100_bases CGGATGAAACTGTGCGACGTACGCTCGAAAAAAACAGCTTAAGCCTTGGCTAAAAGAGCAGTGGTGTTTTTCTACTGTAG GCGTAGACTTTGTTTGGCGG
Downstream 100 bases:
>100_bases TCACTGTGGCAAAGCACTAGCGGTATCATCCGCAATAAGACAGATAGACTGCGATACCAATACCTTGATGGCTTCTTAAC CCAAATTGGGGTATCTAGTC
Product: transposase
Products: NA
Alternate protein names: Integrase Catalytic Region; Transposase And Inactivated Derivatives; ISMsm5 Transposase; ISMsm2 Transposase; Transposase For Insertion Sequence Element; ISPsy1 Transposase; ISRSO5-Transposase Protein; Inactivated Transposase; Integrase Catalytic Subunit; Transposase Of
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MENVLDWYAQPYDPDEPVVCFDERPCQLIGETRVPRPSKPGRPQRYDHEYERKGTCNIFGFFQPLKSWRHLKVTEHRKSE DFGVCMQYLVDGLFPDAQQVHVVLDNLNTHTPAALYKTFKPDEALRILSRIQFHYTPKHGSWLNMVEFEFSALSRQCLNR RIPDIEKLRHEVTAWEQRRNWDKAMVNWLFTVDDARTKLSRLYPQTTLS
Sequences:
>Translated_209_residues MENVLDWYAQPYDPDEPVVCFDERPCQLIGETRVPRPSKPGRPQRYDHEYERKGTCNIFGFFQPLKSWRHLKVTEHRKSE DFGVCMQYLVDGLFPDAQQVHVVLDNLNTHTPAALYKTFKPDEALRILSRIQFHYTPKHGSWLNMVEFEFSALSRQCLNR RIPDIEKLRHEVTAWEQRRNWDKAMVNWLFTVDDARTKLSRLYPQTTLS >Mature_209_residues MENVLDWYAQPYDPDEPVVCFDERPCQLIGETRVPRPSKPGRPQRYDHEYERKGTCNIFGFFQPLKSWRHLKVTEHRKSE DFGVCMQYLVDGLFPDAQQVHVVLDNLNTHTPAALYKTFKPDEALRILSRIQFHYTPKHGSWLNMVEFEFSALSRQCLNR RIPDIEKLRHEVTAWEQRRNWDKAMVNWLFTVDDARTKLSRLYPQTTLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24870; Mature: 24870
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVLDWYAQPYDPDEPVVCFDERPCQLIGETRVPRPSKPGRPQRYDHEYERKGTCNIFG CCCHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHH FFQPLKSWRHLKVTEHRKSEDFGVCMQYLVDGLFPDAQQVHVVLDNLNTHTPAALYKTFK HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCC PDEALRILSRIQFHYTPKHGSWLNMVEFEFSALSRQCLNRRIPDIEKLRHEVTAWEQRRN CHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC WDKAMVNWLFTVDDARTKLSRLYPQTTLS HHHHHHHHHHHCCHHHHHHHHHCCHHCCC >Mature Secondary Structure MENVLDWYAQPYDPDEPVVCFDERPCQLIGETRVPRPSKPGRPQRYDHEYERKGTCNIFG CCCHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHH FFQPLKSWRHLKVTEHRKSEDFGVCMQYLVDGLFPDAQQVHVVLDNLNTHTPAALYKTFK HHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCC PDEALRILSRIQFHYTPKHGSWLNMVEFEFSALSRQCLNRRIPDIEKLRHEVTAWEQRRN CHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC WDKAMVNWLFTVDDARTKLSRLYPQTTLS HHHHHHHHHHHCCHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA