| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337283
Identifier: 158337283
GI number: 158337283
Start: 4193701
End: 4194690
Strand: Direct
Name: 158337283
Synonym: AM1_4160
Alternate gene names: NA
Gene position: 4193701-4194690 (Clockwise)
Preceding gene: 158337282
Following gene: 158337285
Centisome position: 64.48
GC content: 49.09
Gene sequence:
>990_bases ATGCCCTCACTGTCCTTCTCGGCGATTAATCCCAAACTTGCGTTAGTGATCTCCAGAGCCTTGGCGGCATTGCGGCCTTC TCTGATTGCTTTTTTGGTTGCCAATGCCATGTTGCTGAGTGGCGGCACCCAAACGCCCATCTCCTTTTGTAATGTCTTAT TTGTGGGCAATTTATGCGCAGCCTTAGCTGTGGGAACCTGGTTTGGCTGGCGCTCTTTGATCCAAGATTGGCGGAGCCTG GATCGACGCATTCAGGTGGGGCTGTTTTTGAACGGCGGTTTAGCTGCCCTCCTTTCTTCTTTGATTTTTGTGGGATTGGC CTATACGTCCGTGACGAATGCGGTTTTGTTGGGACGTCTTGGCCCTGTCATCTATGCATTGGTTGGCACCCTGATTTTAG GCCGCAAAATCAAGCGATTTGAATGGATTGGGTTTTCCTTGATTATTGCGGGGGTATTGGCGATTGTGCTGAAGACCAGC AACTTTGAGATTAATCAGGGCGATCTATTCATTCTGCTGTCGGCCTTGGTCTATGCGGCCAGCTCCACCTTGGGGAAGCT GATGCTGTCTCAGCAGACGAATCTGCGCATTGTGGTGTTTAGCCGTAATCTTATTTCGGCCATCATCTTCTTTGTTATTG CTAATTTGGTGTTTGGCCCAGAGCATTTTATGGATGTGCTGGCAGGGCAACTGTGGATAGTGATGGTGGTCTATGCCCTA ATCATTATTGTCTTGGCCCAATTTCTTTGGTATTCAGCCCTGGAGCAATTGAATTCGCAAACGGTAGGTAAATGGACGGC GTTGTCTCCAGTATTTGGGGTGACCTATGCCTTTGTGCTGAATGGTGAGCGGCCTTCCCTGGCTCAAGTTTTAGCGTTTC TGGTGATTATGGCAGGGATTTGTATAACGAGCTTTAATCGGCAGTCTTCTCGACCGATGGAAACTAACGAGATGGCCGAT GGGGCTGAAAGCTGTATGTCTACGTCTTAG
Upstream 100 bases:
>100_bases AGACAGGGTGGCCGATCCTGTACAAATTACGGGAGAAGTGGTTCAATATGCGGATGCTTTTGTTCTGAAAGCGGATCCAG CCACCTATCAACTGTTGTAG
Downstream 100 bases:
>100_bases CCTAAGGCTATCCCAACCGAGAGATCGCCCCAGGGCTTAGGGCTGCTGCAGTCGAGCGATTTGCATAGGGTAGCTATCTT TGATCTTCTTCAACGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPSLSFSAINPKLALVISRALAALRPSLIAFLVANAMLLSGGTQTPISFCNVLFVGNLCAALAVGTWFGWRSLIQDWRSL DRRIQVGLFLNGGLAALLSSLIFVGLAYTSVTNAVLLGRLGPVIYALVGTLILGRKIKRFEWIGFSLIIAGVLAIVLKTS NFEINQGDLFILLSALVYAASSTLGKLMLSQQTNLRIVVFSRNLISAIIFFVIANLVFGPEHFMDVLAGQLWIVMVVYAL IIIVLAQFLWYSALEQLNSQTVGKWTALSPVFGVTYAFVLNGERPSLAQVLAFLVIMAGICITSFNRQSSRPMETNEMAD GAESCMSTS
Sequences:
>Translated_329_residues MPSLSFSAINPKLALVISRALAALRPSLIAFLVANAMLLSGGTQTPISFCNVLFVGNLCAALAVGTWFGWRSLIQDWRSL DRRIQVGLFLNGGLAALLSSLIFVGLAYTSVTNAVLLGRLGPVIYALVGTLILGRKIKRFEWIGFSLIIAGVLAIVLKTS NFEINQGDLFILLSALVYAASSTLGKLMLSQQTNLRIVVFSRNLISAIIFFVIANLVFGPEHFMDVLAGQLWIVMVVYAL IIIVLAQFLWYSALEQLNSQTVGKWTALSPVFGVTYAFVLNGERPSLAQVLAFLVIMAGICITSFNRQSSRPMETNEMAD GAESCMSTS >Mature_328_residues PSLSFSAINPKLALVISRALAALRPSLIAFLVANAMLLSGGTQTPISFCNVLFVGNLCAALAVGTWFGWRSLIQDWRSLD RRIQVGLFLNGGLAALLSSLIFVGLAYTSVTNAVLLGRLGPVIYALVGTLILGRKIKRFEWIGFSLIIAGVLAIVLKTSN FEINQGDLFILLSALVYAASSTLGKLMLSQQTNLRIVVFSRNLISAIIFFVIANLVFGPEHFMDVLAGQLWIVMVVYALI IIVLAQFLWYSALEQLNSQTVGKWTALSPVFGVTYAFVLNGERPSLAQVLAFLVIMAGICITSFNRQSSRPMETNEMADG AESCMSTS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 35652; Mature: 35521
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSLSFSAINPKLALVISRALAALRPSLIAFLVANAMLLSGGTQTPISFCNVLFVGNLCA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ALAVGTWFGWRSLIQDWRSLDRRIQVGLFLNGGLAALLSSLIFVGLAYTSVTNAVLLGRL HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GPVIYALVGTLILGRKIKRFEWIGFSLIIAGVLAIVLKTSNFEINQGDLFILLSALVYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH SSTLGKLMLSQQTNLRIVVFSRNLISAIIFFVIANLVFGPEHFMDVLAGQLWIVMVVYAL HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IIIVLAQFLWYSALEQLNSQTVGKWTALSPVFGVTYAFVLNGERPSLAQVLAFLVIMAGI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH CITSFNRQSSRPMETNEMADGAESCMSTS HHHHCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PSLSFSAINPKLALVISRALAALRPSLIAFLVANAMLLSGGTQTPISFCNVLFVGNLCA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ALAVGTWFGWRSLIQDWRSLDRRIQVGLFLNGGLAALLSSLIFVGLAYTSVTNAVLLGRL HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GPVIYALVGTLILGRKIKRFEWIGFSLIIAGVLAIVLKTSNFEINQGDLFILLSALVYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH SSTLGKLMLSQQTNLRIVVFSRNLISAIIFFVIANLVFGPEHFMDVLAGQLWIVMVVYAL HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IIIVLAQFLWYSALEQLNSQTVGKWTALSPVFGVTYAFVLNGERPSLAQVLAFLVIMAGI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH CITSFNRQSSRPMETNEMADGAESCMSTS HHHHCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]