Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158337227

Identifier: 158337227

GI number: 158337227

Start: 4142883

End: 4143314

Strand: Reverse

Name: 158337227

Synonym: AM1_4104

Alternate gene names: NA

Gene position: 4143314-4142883 (Counterclockwise)

Preceding gene: 158337230

Following gene: 158337225

Centisome position: 63.71

GC content: 42.82

Gene sequence:

>432_bases
GTGAGGACTTCACTCATGTCTCAATCTGCAAATGTTGTCAAACTCCTAAAGATCTTAATTGGTGTAGCCTGGCTAGATGG
CACCGTTCAACAAGCAGAACAAGTCTATCTACGCAAGATTGCCCATAATAAAGGTGTGGAAGAAGATCCAGAACTACGCC
CCTGGCTCTACGGATTACGGTCTGTGACCAAAGAAGAATGCTATGCCTGGGTAGAAGATTATTTAGGGAAAAAACCCAAG
TCAGCCGCGTATCAACAACTCTTAGAAGACTTAAGTGGCCTAATCTATAGCGATGGCGAAGTAGCCCAAGAAGAAGCAAA
ATTTTTAACCCAATTACAACAACTCGATCCCAGTAATACTGATACCCCTCAATTTCGGGAATCTGTCACCCAAGCGGTCC
AAAAGCTTTATCAAAGATGGATTAGTAACTAA

Upstream 100 bases:

>100_bases
ACAGTCAGTGTTGGGGATTTAACATTACTCAGCGAATGGATGGACATAACTCCAACAAGCTGCTTTTCTAAAACTAAGCC
TTCTTCATCACGATCTATCA

Downstream 100 bases:

>100_bases
TCACGGTTGTCCTTGGCCTTTAGCATAATCAGGAGCATCTGGGGATGGGCGAGTCGTTCTGCGAGAGCCATATCCCCACA
GTTCTCGAGTCATGCATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRTSLMSQSANVVKLLKILIGVAWLDGTVQQAEQVYLRKIAHNKGVEEDPELRPWLYGLRSVTKEECYAWVEDYLGKKPK
SAAYQQLLEDLSGLIYSDGEVAQEEAKFLTQLQQLDPSNTDTPQFRESVTQAVQKLYQRWISN

Sequences:

>Translated_143_residues
MRTSLMSQSANVVKLLKILIGVAWLDGTVQQAEQVYLRKIAHNKGVEEDPELRPWLYGLRSVTKEECYAWVEDYLGKKPK
SAAYQQLLEDLSGLIYSDGEVAQEEAKFLTQLQQLDPSNTDTPQFRESVTQAVQKLYQRWISN
>Mature_143_residues
MRTSLMSQSANVVKLLKILIGVAWLDGTVQQAEQVYLRKIAHNKGVEEDPELRPWLYGLRSVTKEECYAWVEDYLGKKPK
SAAYQQLLEDLSGLIYSDGEVAQEEAKFLTQLQQLDPSNTDTPQFRESVTQAVQKLYQRWISN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16394; Mature: 16394

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSLMSQSANVVKLLKILIGVAWLDGTVQQAEQVYLRKIAHNKGVEEDPELRPWLYGLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SVTKEECYAWVEDYLGKKPKSAAYQQLLEDLSGLIYSDGEVAQEEAKFLTQLQQLDPSNT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
DTPQFRESVTQAVQKLYQRWISN
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTSLMSQSANVVKLLKILIGVAWLDGTVQQAEQVYLRKIAHNKGVEEDPELRPWLYGLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
SVTKEECYAWVEDYLGKKPKSAAYQQLLEDLSGLIYSDGEVAQEEAKFLTQLQQLDPSNT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
DTPQFRESVTQAVQKLYQRWISN
CCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA