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The map label for this gene is yibA [H]

Identifier: 158337199

GI number: 158337199

Start: 4124931

End: 4125761

Strand: Reverse

Name: yibA [H]

Synonym: AM1_4076

Alternate gene names: 158337199

Gene position: 4125761-4124931 (Counterclockwise)

Preceding gene: 158337200

Following gene: 158337196

Centisome position: 63.44

GC content: 46.57

Gene sequence:

>831_bases
ATGAACGATTCTCTCAAAACCTTACCGACAGACCAACTACTTTCTCAAGCAGAACAATGCGCTCGTTCGGTCGATGATGA
AAGTGATCTGTATGGGGATATTCTTTATGCTCTTCATCTCCGTTCAGACCCTCAGATTTTTGATACTGCTGTGGAATGGT
GTAAAAGCTCTGAATCCTGTATGAGAGCATTGGGGGCTGCCGTCTTATCACAACTTGGATGTGCAGATCGCCACTCACCC
TATCCTTTTGGCGACGCTGCACTGCCAATTCTGTTGTCACTGCTCCACGATCCTGAAACAGAAGTTCTTTGCAGTGCTAT
CAATGCTTTGGGTCACCATGCATCCTATGATTTCTTATGGGAAAGCAGTGAACTGATGGCATTTGCCAATCACGATTCTG
CAGATGTCCGTTTCTCAGTGGCCTATGCTTCAGGCGGTCCTCAGTGCGATCGCTCTGAGCTTGCAGTCGCAATGATGTGT
CGATTAGCTCAGGACGATGGCTATGATGTGCGCAATTGGGCATTGTTTGGTTTGGGCAACTTAAGTGATGCAGATTCTCC
CCAAGTTCGCGAGGTTCTGTTTCAAGGTTTATCGGATCCTGATGATGAAATCCGAGGAGAGGCGGTTATAGGCCTTGCTA
AACGCCAAGATACCCGCGTTATCCCTGTAGTGCTCAAGGAATTAGCACTACCATCCGTCGATGTTCTAGTGATTGAAGCT
GCCGTAGAATTTCCACAGCCCCAATATCTGGTGCATCTGGAAGAATTACTAGCAGCTAACCCTGATGATTATGACCTTAA
CAAAGCAGTTAAAAAATGTAGCCAGTTGTAA

Upstream 100 bases:

>100_bases
CAACCTCGCTCTGCTCTCAAAGCTAAGCTAGCTGTTTGATTGAGCTTAAGTCAGTGCCATTGATCTGTAGGTATTATCTC
AATCAAAAAATCTTGATCTA

Downstream 100 bases:

>100_bases
GGGTGCCAAGATCAGTATCATTTGCTGTACTTATTTAGCACAGCGGACATGGACAAATGCAAGAGTAGTTTGCCACTGAA
TGGTTTGGTGCAATAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNDSLKTLPTDQLLSQAEQCARSVDDESDLYGDILYALHLRSDPQIFDTAVEWCKSSESCMRALGAAVLSQLGCADRHSP
YPFGDAALPILLSLLHDPETEVLCSAINALGHHASYDFLWESSELMAFANHDSADVRFSVAYASGGPQCDRSELAVAMMC
RLAQDDGYDVRNWALFGLGNLSDADSPQVREVLFQGLSDPDDEIRGEAVIGLAKRQDTRVIPVVLKELALPSVDVLVIEA
AVEFPQPQYLVHLEELLAANPDDYDLNKAVKKCSQL

Sequences:

>Translated_276_residues
MNDSLKTLPTDQLLSQAEQCARSVDDESDLYGDILYALHLRSDPQIFDTAVEWCKSSESCMRALGAAVLSQLGCADRHSP
YPFGDAALPILLSLLHDPETEVLCSAINALGHHASYDFLWESSELMAFANHDSADVRFSVAYASGGPQCDRSELAVAMMC
RLAQDDGYDVRNWALFGLGNLSDADSPQVREVLFQGLSDPDDEIRGEAVIGLAKRQDTRVIPVVLKELALPSVDVLVIEA
AVEFPQPQYLVHLEELLAANPDDYDLNKAVKKCSQL
>Mature_276_residues
MNDSLKTLPTDQLLSQAEQCARSVDDESDLYGDILYALHLRSDPQIFDTAVEWCKSSESCMRALGAAVLSQLGCADRHSP
YPFGDAALPILLSLLHDPETEVLCSAINALGHHASYDFLWESSELMAFANHDSADVRFSVAYASGGPQCDRSELAVAMMC
RLAQDDGYDVRNWALFGLGNLSDADSPQVREVLFQGLSDPDDEIRGEAVIGLAKRQDTRVIPVVLKELALPSVDVLVIEA
AVEFPQPQYLVHLEELLAANPDDYDLNKAVKKCSQL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790021, Length=241, Percent_Identity=28.2157676348548, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR000357 [H]

Pfam domain/function: PF02985 HEAT [H]

EC number: NA

Molecular weight: Translated: 30242; Mature: 30242

Theoretical pI: Translated: 4.12; Mature: 4.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSLKTLPTDQLLSQAEQCARSVDDESDLYGDILYALHLRSDPQIFDTAVEWCKSSESC
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
MRALGAAVLSQLGCADRHSPYPFGDAALPILLSLLHDPETEVLCSAINALGHHASYDFLW
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE
ESSELMAFANHDSADVRFSVAYASGGPQCDRSELAVAMMCRLAQDDGYDVRNWALFGLGN
CCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEEEECCC
LSDADSPQVREVLFQGLSDPDDEIRGEAVIGLAKRQDTRVIPVVLKELALPSVDVLVIEA
CCCCCCHHHHHHHHHCCCCCCHHHCCCCEEEEHHCCCCCHHHHHHHHHCCCCCHHHEEEH
AVEFPQPQYLVHLEELLAANPDDYDLNKAVKKCSQL
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNDSLKTLPTDQLLSQAEQCARSVDDESDLYGDILYALHLRSDPQIFDTAVEWCKSSESC
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHH
MRALGAAVLSQLGCADRHSPYPFGDAALPILLSLLHDPETEVLCSAINALGHHASYDFLW
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEE
ESSELMAFANHDSADVRFSVAYASGGPQCDRSELAVAMMCRLAQDDGYDVRNWALFGLGN
CCCCEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHEEEEECCC
LSDADSPQVREVLFQGLSDPDDEIRGEAVIGLAKRQDTRVIPVVLKELALPSVDVLVIEA
CCCCCCHHHHHHHHHCCCCCCHHHCCCCEEEEHHCCCCCHHHHHHHHHCCCCCHHHEEEH
AVEFPQPQYLVHLEELLAANPDDYDLNKAVKKCSQL
HHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551 [H]