| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337183
Identifier: 158337183
GI number: 158337183
Start: 4108626
End: 4109171
Strand: Reverse
Name: 158337183
Synonym: AM1_4060
Alternate gene names: NA
Gene position: 4109171-4108626 (Counterclockwise)
Preceding gene: 158337184
Following gene: 158337182
Centisome position: 63.18
GC content: 48.9
Gene sequence:
>546_bases ATGTCTGTAGAGAATCTCGTTACCCCCCTCGCCGACTTGGAAGCGATCCCCTATCTGGATGCTGGCGGGATGCTCCCCCA ACAATTTGCTGGCAAAATTGGTGTCTATGCCATCTTTGGGGAAGATCAAAGCCTCCAATATGTGGGGTACTCAAGAGATA CCTTTCTCAGCCTCAAACAGCACTTAATTCGTCAACCTCGTTTATGCTATTGGCTGAAAGTCCAAACCATTGATCGTCCC AACCGTACCCTACTGGAAGAAATACGGAGTACCTGGATTCAAGGCAATGATGCGCCAGTCCCTGGTAACAACAGCGATCA GAGCAAGTGGGAACAGGCCATTGACGTCAAAGCCGCAATGACCGATGAAGAACAGGCCCAACATCAAGACCCCGCTTTAG ACGAGCGAAGCCAGCTCAAAGTTCTTAAAAATGCGGCTCGTCGTCTAGAAGCCGAAATCATGGAGATCCTCAACCAGCGT GGCTTACAAGAGCCTCTGCGTTTTAACCCTAAGTTGAAAGAGACGGGTTTGTTGGATTTGAAATAA
Upstream 100 bases:
>100_bases ATAGTACTGCATACTAGGAATAACTCCAGAACTGGGGAACTGCCCTGAGTCTGACAAGATATTCCCCTAATAATGGAGCG GGTCGTATCGAAACTTGATT
Downstream 100 bases:
>100_bases TATCTGTTATCCCTCCCCCAGCATTTGCTCATCACAGTTCCAGAGCTTCTTTTTTTGCAGAGATATCGCCCCTAATCCAG AGAAGTCTCATGCCTGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSVENLVTPLADLEAIPYLDAGGMLPQQFAGKIGVYAIFGEDQSLQYVGYSRDTFLSLKQHLIRQPRLCYWLKVQTIDRP NRTLLEEIRSTWIQGNDAPVPGNNSDQSKWEQAIDVKAAMTDEEQAQHQDPALDERSQLKVLKNAARRLEAEIMEILNQR GLQEPLRFNPKLKETGLLDLK
Sequences:
>Translated_181_residues MSVENLVTPLADLEAIPYLDAGGMLPQQFAGKIGVYAIFGEDQSLQYVGYSRDTFLSLKQHLIRQPRLCYWLKVQTIDRP NRTLLEEIRSTWIQGNDAPVPGNNSDQSKWEQAIDVKAAMTDEEQAQHQDPALDERSQLKVLKNAARRLEAEIMEILNQR GLQEPLRFNPKLKETGLLDLK >Mature_180_residues SVENLVTPLADLEAIPYLDAGGMLPQQFAGKIGVYAIFGEDQSLQYVGYSRDTFLSLKQHLIRQPRLCYWLKVQTIDRPN RTLLEEIRSTWIQGNDAPVPGNNSDQSKWEQAIDVKAAMTDEEQAQHQDPALDERSQLKVLKNAARRLEAEIMEILNQRG LQEPLRFNPKLKETGLLDLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20617; Mature: 20486
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVENLVTPLADLEAIPYLDAGGMLPQQFAGKIGVYAIFGEDQSLQYVGYSRDTFLSLKQ CCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEECCCCCEEEECCCHHHHHHHHH HLIRQPRLCYWLKVQTIDRPNRTLLEEIRSTWIQGNDAPVPGNNSDQSKWEQAIDVKAAM HHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC TDEEQAQHQDPALDERSQLKVLKNAARRLEAEIMEILNQRGLQEPLRFNPKLKETGLLDL CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC K C >Mature Secondary Structure SVENLVTPLADLEAIPYLDAGGMLPQQFAGKIGVYAIFGEDQSLQYVGYSRDTFLSLKQ CHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEEEECCCCCEEEECCCHHHHHHHHH HLIRQPRLCYWLKVQTIDRPNRTLLEEIRSTWIQGNDAPVPGNNSDQSKWEQAIDVKAAM HHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHC TDEEQAQHQDPALDERSQLKVLKNAARRLEAEIMEILNQRGLQEPLRFNPKLKETGLLDL CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA