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The map label for this gene is pex

Identifier: 158337163

GI number: 158337163

Start: 4084909

End: 4085289

Strand: Direct

Name: pex

Synonym: AM1_4038

Alternate gene names: NA

Gene position: 4084909-4085289 (Clockwise)

Preceding gene: 158337160

Following gene: 158337164

Centisome position: 62.81

GC content: 44.36

Gene sequence:

>381_bases
ATGAAATTCCAAGATATTTATCGATATTTTCAAGAACCACCACCTATCTATCTCAGTAAAGAAGTAGCGGTTTGCTACGT
GTTATCTGTGCTGATTGACCATGGTGATTCTTATGGAACAGCATTGATCCAGCTTGTAGAGAATAACCATCCGCTATATC
GTTTGTCAGATACGGTATTGTACAGCGCACTCAAATTCTTAGAAGATGAGGGTGTAATCAGAGGCTATTGGCAAAAAGTA
GAAGGCCGAGGACGTCCACGCCGCATGTATGAAGTGGCTACAGAGAAATCTGATGAGGCCAGGAAACTGGGGCGTTTGTG
GCATCAATTCCTCGGTGAAGAGCAGCTAGTCTCAGGGGCTCAGCAACTTAGATCTGGTTGA

Upstream 100 bases:

>100_bases
TTCCGGGCAACTTCTCTAGACCTGCTCATGGAGCATGACGATTAACCATTGTCATTAGTTTCCGCATCATTATTCACCTT
ATTTACGAAGTAGACAGCAC

Downstream 100 bases:

>100_bases
GTATTTTTTATATCCAATTATTAGTTATCGGCATTAGATTTTGGTCTAATGCCGATTTTCTATGAGCAGTTGTGCTGATG
TGGCTTTCTTTATTTCAGCT

Product: circadian period extender Pex

Products: NA

Alternate protein names: Circadian Period Extender Pex; Period-Extender Protein; PadR Family Transcriptional Regulator; Circadian Period Extender Gene; Period-Extender; Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; Circadian Period Extender

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKFQDIYRYFQEPPPIYLSKEVAVCYVLSVLIDHGDSYGTALIQLVENNHPLYRLSDTVLYSALKFLEDEGVIRGYWQKV
EGRGRPRRMYEVATEKSDEARKLGRLWHQFLGEEQLVSGAQQLRSG

Sequences:

>Translated_126_residues
MKFQDIYRYFQEPPPIYLSKEVAVCYVLSVLIDHGDSYGTALIQLVENNHPLYRLSDTVLYSALKFLEDEGVIRGYWQKV
EGRGRPRRMYEVATEKSDEARKLGRLWHQFLGEEQLVSGAQQLRSG
>Mature_126_residues
MKFQDIYRYFQEPPPIYLSKEVAVCYVLSVLIDHGDSYGTALIQLVENNHPLYRLSDTVLYSALKFLEDEGVIRGYWQKV
EGRGRPRRMYEVATEKSDEARKLGRLWHQFLGEEQLVSGAQQLRSG

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14657; Mature: 14657

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQDIYRYFQEPPPIYLSKEVAVCYVLSVLIDHGDSYGTALIQLVENNHPLYRLSDTVL
CCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHHHHHH
YSALKFLEDEGVIRGYWQKVEGRGRPRRMYEVATEKSDEARKLGRLWHQFLGEEQLVSGA
HHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHH
QQLRSG
HHHHCC
>Mature Secondary Structure
MKFQDIYRYFQEPPPIYLSKEVAVCYVLSVLIDHGDSYGTALIQLVENNHPLYRLSDTVL
CCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHHHHHH
YSALKFLEDEGVIRGYWQKVEGRGRPRRMYEVATEKSDEARKLGRLWHQFLGEEQLVSGA
HHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHH
QQLRSG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA