Click here to switch to the map view.

The map label for this gene is pspA [C]

Identifier: 158337125

GI number: 158337125

Start: 4046068

End: 4046862

Strand: Reverse

Name: pspA [C]

Synonym: AM1_3998

Alternate gene names: 158337125

Gene position: 4046862-4046068 (Counterclockwise)

Preceding gene: 158337127

Following gene: 158337123

Centisome position: 62.22

GC content: 50.69

Gene sequence:

>795_bases
ATGGGATTATTTGACCGCGTTAGTCGGGTTGTTCGTTCAAACCTCAATGCAGTTGTCAGCTCTGCCGAAGATCCAGAAAA
AATCCTGGAGCAAACCGTTGAGGATATGCGAGAAGACTTAGTGCAATTGCGTCAAGCTGTTGCCCAGTCCATCGCAGCCC
AAAAGCGGGTTGAACAGCAATATAATCAGGCCCAGACTCAGTCTTCCGAATGGTATCGTCGCGCCCAGCTTGCCCTCCAA
AAAGGCGATGAGAATTTGGCCCGCGAAGCCCTATCTCGCAAGCAAACATTCACAGATACGGCCAACAGCCTCAAATCTCA
GCTGGATCAATCCACCAATCAAGTGGCGACCCTAAAGCGCAACATGACTGCTTTAGAAAGCAAAATTGCCGAAGCCAAGA
CCAAGAAAGAGATGCTCAAAGCGCGTGCCCGGGCGGCCAAAGCAAGCGAGCAGATCAACAAAGCCATGGGTAGAGTGGAT
ACCTCAGGAGCCATTGGTGCTTTTGAGCGTATGGAAGAGAAAGTCATGGAAATGGAGGCCCAGTCTGAGGCAATCGCCGA
GTTAGCAGGGGATACCTTAGATAGTCAGTTTGCCAGTTTAGAAGCTGGTAGTGACGTGGATTCAGAATTGGCCATGTTAA
AAGCGCAACTTGCAGAACCACCTGCCTTAGAAGGGACGCCTGCAGCACCAGAAGCTTTACCTGCCTCTACAACCGAACCT
GTGGATACTCCCCAGCAACAAACCCCCGTGGATGCGGAACTTGAAGAACTGCGGAACAAGCTGGATCAAATCTAA

Upstream 100 bases:

>100_bases
GCAACAGCCTTGGGATAGATCTCCTCGCTAACCTAAAGCTTCGCTAGTCTAAAACCAGGGATTGTCATAGAAGTTTATTG
TTTTAAGGAAAAACCGAGTC

Downstream 100 bases:

>100_bases
ATCAGGGCTTGTAGACTGGGCTGATACTCAATAGACTGAGCGAATGACGAACGGCTTCCAGCAGGTAAGCAGCTTAAGTT
CTCGTAATCGACTGGATTGG

Product: PspA/IM30 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MGLFDRVSRVVRSNLNAVVSSAEDPEKILEQTVEDMREDLVQLRQAVAQSIAAQKRVEQQYNQAQTQSSEWYRRAQLALQ
KGDENLAREALSRKQTFTDTANSLKSQLDQSTNQVATLKRNMTALESKIAEAKTKKEMLKARARAAKASEQINKAMGRVD
TSGAIGAFERMEEKVMEMEAQSEAIAELAGDTLDSQFASLEAGSDVDSELAMLKAQLAEPPALEGTPAAPEALPASTTEP
VDTPQQQTPVDAELEELRNKLDQI

Sequences:

>Translated_264_residues
MGLFDRVSRVVRSNLNAVVSSAEDPEKILEQTVEDMREDLVQLRQAVAQSIAAQKRVEQQYNQAQTQSSEWYRRAQLALQ
KGDENLAREALSRKQTFTDTANSLKSQLDQSTNQVATLKRNMTALESKIAEAKTKKEMLKARARAAKASEQINKAMGRVD
TSGAIGAFERMEEKVMEMEAQSEAIAELAGDTLDSQFASLEAGSDVDSELAMLKAQLAEPPALEGTPAAPEALPASTTEP
VDTPQQQTPVDAELEELRNKLDQI
>Mature_263_residues
GLFDRVSRVVRSNLNAVVSSAEDPEKILEQTVEDMREDLVQLRQAVAQSIAAQKRVEQQYNQAQTQSSEWYRRAQLALQK
GDENLAREALSRKQTFTDTANSLKSQLDQSTNQVATLKRNMTALESKIAEAKTKKEMLKARARAAKASEQINKAMGRVDT
SGAIGAFERMEEKVMEMEAQSEAIAELAGDTLDSQFASLEAGSDVDSELAMLKAQLAEPPALEGTPAAPEALPASTTEPV
DTPQQQTPVDAELEELRNKLDQI

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=219, Percent_Identity=33.7899543378995, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 28993; Mature: 28862

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLFDRVSRVVRSNLNAVVSSAEDPEKILEQTVEDMREDLVQLRQAVAQSIAAQKRVEQQ
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNQAQTQSSEWYRRAQLALQKGDENLAREALSRKQTFTDTANSLKSQLDQSTNQVATLKR
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NMTALESKIAEAKTKKEMLKARARAAKASEQINKAMGRVDTSGAIGAFERMEEKVMEMEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QSEAIAELAGDTLDSQFASLEAGSDVDSELAMLKAQLAEPPALEGTPAAPEALPASTTEP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VDTPQQQTPVDAELEELRNKLDQI
CCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GLFDRVSRVVRSNLNAVVSSAEDPEKILEQTVEDMREDLVQLRQAVAQSIAAQKRVEQQ
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNQAQTQSSEWYRRAQLALQKGDENLAREALSRKQTFTDTANSLKSQLDQSTNQVATLKR
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NMTALESKIAEAKTKKEMLKARARAAKASEQINKAMGRVDTSGAIGAFERMEEKVMEMEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
QSEAIAELAGDTLDSQFASLEAGSDVDSELAMLKAQLAEPPALEGTPAAPEALPASTTEP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
VDTPQQQTPVDAELEELRNKLDQI
CCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]