| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158337122
Identifier: 158337122
GI number: 158337122
Start: 4043938
End: 4044612
Strand: Reverse
Name: 158337122
Synonym: AM1_3996
Alternate gene names: NA
Gene position: 4044612-4043938 (Counterclockwise)
Preceding gene: 158337123
Following gene: 158337121
Centisome position: 62.19
GC content: 50.67
Gene sequence:
>675_bases ATGAGTTATTCTCGCCGTTTACTCTGTGCCTTCTCTAGTGCTTTGATGCTAGTAGGGTTGAATTGTGCTGCTAGTCGTGC AGCCGAAAAAATTACGGTCAGCTATGGTCCTTTTGGCCGATCCATCGCAGTCTCTGACCTTCGCCAATTATTGGAAACTG GGAGTGCTCCTCCTGATCTCGCTTCTGTCTTGAGTGTTGTGGGTCAGCAAGAAAGGGACTCTTTATTGGGGGGCCTCAAG TTTAAGGTGCCTTTAAATGTTGTCGTCCTTGATAAAATTTTGCGATCTCCCCAAGGGGACCAACTGCTCTCCCAAATCGC AGGGGCAACTTCTCTGCCCGGTGGCGTAGAAAAACTAGCCCTTAGAAGTGCTCTTATTGGTGCCGCTGCTTCTGACGATG GGTTAGGGATTCTGAGTTTCCTAGAAGCTTATCCCACTCAAACCTTGAAAATTGATTTAGCAGCCGTTCAGAAACTGATG AAGTCTGGATCCCTCTTAGGCGGGTTTATGGGCGGGCAATTCTCAGGCGGAGACGCCCCGGCAGTCACACCCGAAGCTCC TAGCGATAAAAGTGCCCCTTCCCCTGAAGCCGATGCTCCAAGCTCTGAAGCGACAGAAGATCCCGCTGATGCGGCAGCTC CCGAATCCAGCTCTGACGATAAGCCCAATGAATAA
Upstream 100 bases:
>100_bases CGATTCCTTCCTGCATACTTGACCATGCAGAAAGGGCAGTCCTGTATTAATCCGACTTGATTTAGATATACTCCCCTCAC AGCAAAGGAAATCAGTCTTT
Downstream 100 bases:
>100_bases TAATTTGTGTAGTCCTATAAGTGGGGTAGAAGCAGCGCAATAATGAGAGGGACAAAGGTATTGGCCCGTCTGCTAGTCCT AGGGCTGAGCTGCACATGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MSYSRRLLCAFSSALMLVGLNCAASRAAEKITVSYGPFGRSIAVSDLRQLLETGSAPPDLASVLSVVGQQERDSLLGGLK FKVPLNVVVLDKILRSPQGDQLLSQIAGATSLPGGVEKLALRSALIGAAASDDGLGILSFLEAYPTQTLKIDLAAVQKLM KSGSLLGGFMGGQFSGGDAPAVTPEAPSDKSAPSPEADAPSSEATEDPADAAAPESSSDDKPNE
Sequences:
>Translated_224_residues MSYSRRLLCAFSSALMLVGLNCAASRAAEKITVSYGPFGRSIAVSDLRQLLETGSAPPDLASVLSVVGQQERDSLLGGLK FKVPLNVVVLDKILRSPQGDQLLSQIAGATSLPGGVEKLALRSALIGAAASDDGLGILSFLEAYPTQTLKIDLAAVQKLM KSGSLLGGFMGGQFSGGDAPAVTPEAPSDKSAPSPEADAPSSEATEDPADAAAPESSSDDKPNE >Mature_223_residues SYSRRLLCAFSSALMLVGLNCAASRAAEKITVSYGPFGRSIAVSDLRQLLETGSAPPDLASVLSVVGQQERDSLLGGLKF KVPLNVVVLDKILRSPQGDQLLSQIAGATSLPGGVEKLALRSALIGAAASDDGLGILSFLEAYPTQTLKIDLAAVQKLMK SGSLLGGFMGGQFSGGDAPAVTPEAPSDKSAPSPEADAPSSEATEDPADAAAPESSSDDKPNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22888; Mature: 22757
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSRRLLCAFSSALMLVGLNCAASRAAEKITVSYGPFGRSIAVSDLRQLLETGSAPPDL CCCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCHHH ASVLSVVGQQERDSLLGGLKFKVPLNVVVLDKILRSPQGDQLLSQIAGATSLPGGVEKLA HHHHHHHCCHHHHHHHCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH LRSALIGAAASDDGLGILSFLEAYPTQTLKIDLAAVQKLMKSGSLLGGFMGGQFSGGDAP HHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCHHHHCCCCCCCCCCCC AVTPEAPSDKSAPSPEADAPSSEATEDPADAAAPESSSDDKPNE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC >Mature Secondary Structure SYSRRLLCAFSSALMLVGLNCAASRAAEKITVSYGPFGRSIAVSDLRQLLETGSAPPDL CCCHHHHHHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCHHH ASVLSVVGQQERDSLLGGLKFKVPLNVVVLDKILRSPQGDQLLSQIAGATSLPGGVEKLA HHHHHHHCCHHHHHHHCCEEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHH LRSALIGAAASDDGLGILSFLEAYPTQTLKIDLAAVQKLMKSGSLLGGFMGGQFSGGDAP HHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCHHHHCCCCCCCCCCCC AVTPEAPSDKSAPSPEADAPSSEATEDPADAAAPESSSDDKPNE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA