Click here to switch to the map view.

The map label for this gene is 158337108

Identifier: 158337108

GI number: 158337108

Start: 4030609

End: 4032372

Strand: Direct

Name: 158337108

Synonym: AM1_3981

Alternate gene names: NA

Gene position: 4030609-4032372 (Clockwise)

Preceding gene: 158337107

Following gene: 158337110

Centisome position: 61.97

GC content: 47.79

Gene sequence:

>1764_bases
ATGAAAAAAGTATGTCTATTAGCTGGAAGCCTGAGTCTTCTCGGACTTTCTGCCCTACCTGCAAAGGCTGTTAGCACTAG
CGAACAGCTTCCTGTAGAAGCTCAATCTGTTGATGTATCACCTGTTACTGCTGAGCAAGATGAATTATTGCTTGCTGATC
AGTCTCTAAGTCAAACAACTTCTGTTAATGACTTGATGGCTGAGACCAAAGAAGATTCCGTTGGTCAGGTGACCTCAGTT
TCTCAACTGTCTGATGTTCAGCCTGATGACTGGGCTTTCCAAGCCATTCAATCATTGGTTGAGCGCTATGGTTGTGTCGC
CGGTTATCCCAATGGCACATTCCGCCCCAGCCGAGCCATGTCTCGTCGTGAGGCTGCTGCATTGGTTAATGCTTGTTTAG
ATAACCTCAGCAACCGCTTCGCCACTAAAGAAGATTTAGATGCCCTCAAGGCTCTGCAGGATGAGTTCGCTGCTGAACTT
GCTACCCTAAGAGGTCGGGTGGACGGTTTAGAAGCTCGTGTTGCCACTGTTGAAGCTCAGCAATTCTCCACTACCACCAA
ACTACAAGGTGAAGTGGTCATGGCTGCTCAGTTTGGTGACTTCGTCAACAACCCCACAGATACTGTTGTTGATCCCGCTA
ACGGTGTTCTAAACGCTGGTGGACCTGACAGCCGCGTTTCTGCCATCTCTCGAGTTCGTTTGAACTTCAACACTAGTTTC
TCTGGCGATGACTTATTAGCCACCCAATTAGAGGTTGGTAATAACGGTCAAGATTTCTTTGGTAACGCTTTGGGTGCTCA
GGATCATGGCCCAGGTTTGGGAACTTTGACAGGTTCCGGTGTACCTTTAGTTGATTTGGGTGCTGCCGACTATGCAGGTG
TAGGTAATACCGTTACGCTGCGTCGTTTAGCCTATACCTTCAAGCCTGGTGAGAACTTGGCTGTTACTGTTGGTACCAAC
ATCTTCCCTAGCGATTTTGTTGATTTCAACAGCTATGCCAACAACTCTGCTCAAGATTTCAGCTCTGGCTTCTTTATCAA
TAACCCACTAATCATCACCAACGCGGTTGATCTCAATGGTGGTGCTGGTGCAGCCTTTGATTGGAATCCTAATGCTGGTA
ACATCAGCGTTCGTGGTGTGTATGTTGCCGCTGCTGGTAACGTCGCAACTGCTGCTGCTAATGGTGGCTTAGGTGGCGAT
CCTCACCAAGGGACCTTGGAACTTGAGTACGCCAACAGCTTTGGTGAAGACGATCAAAACAACTTTGCCATTCGTTTGCA
AGGTACCTACGCTGAGACTTTCAGCATTGAGCAGAAAGTTCTAGGTGTTAACGCTGAAGCAACTTTCGGTAACATCGGTG
TCTTTGGCCGCTACGGTATCTCCTTTGATCCTCAGAACCAAGTTGGCGTTAATAACGTTGATGTATTTGGTGCTGCGGCT
CCTGCTTCAATCATCACTGCTGGTGGTTCTAACACCATCCAGACTTGGATGGCTGGTGTTGGTTACAAAGACGCACTCGT
TCCTGGTTCTTTGTTCGCAGTTGCTGCTGGTATGCCTTATTTGGTTACCGGTACTCCTGGATCTAATGACCAGATCAACT
TGGAAGCCTTCTATCGGTTCCCAGTTAATGACAACATCACCATCACTCCTGCTGTGATGTACATCATTAATCCTTTGGGT
ACTGTCAATGGCCTCTCCGCTGCTGGTGCTGGCAACGATAACGACATCATCCAAGGTTTGATTCGAGCAACCTTCTCGTT
CTAA

Upstream 100 bases:

>100_bases
CAATACAATGCAAAGATTTGCATGGTGTTAATGAGAAGCATTAAGTTATCGTGTTTAACTTTTCCAAAATTTTAAACACA
TGTGAGTGAGGAGCAAAACC

Downstream 100 bases:

>100_bases
ATCATTGATTGGATATAAGCCTTTTAGGCTGAAATAAGGCAGTGTGAGAACACACTGCCTTATTTATTGTCTTTAAATTG
CTATGGATACCCAGAACTTC

Product: carbohydrate porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MKKVCLLAGSLSLLGLSALPAKAVSTSEQLPVEAQSVDVSPVTAEQDELLLADQSLSQTTSVNDLMAETKEDSVGQVTSV
SQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAEL
ATLRGRVDGLEARVATVEAQQFSTTTKLQGEVVMAAQFGDFVNNPTDTVVDPANGVLNAGGPDSRVSAISRVRLNFNTSF
SGDDLLATQLEVGNNGQDFFGNALGAQDHGPGLGTLTGSGVPLVDLGAADYAGVGNTVTLRRLAYTFKPGENLAVTVGTN
IFPSDFVDFNSYANNSAQDFSSGFFINNPLIITNAVDLNGGAGAAFDWNPNAGNISVRGVYVAAAGNVATAAANGGLGGD
PHQGTLELEYANSFGEDDQNNFAIRLQGTYAETFSIEQKVLGVNAEATFGNIGVFGRYGISFDPQNQVGVNNVDVFGAAA
PASIITAGGSNTIQTWMAGVGYKDALVPGSLFAVAAGMPYLVTGTPGSNDQINLEAFYRFPVNDNITITPAVMYIINPLG
TVNGLSAAGAGNDNDIIQGLIRATFSF

Sequences:

>Translated_587_residues
MKKVCLLAGSLSLLGLSALPAKAVSTSEQLPVEAQSVDVSPVTAEQDELLLADQSLSQTTSVNDLMAETKEDSVGQVTSV
SQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAEL
ATLRGRVDGLEARVATVEAQQFSTTTKLQGEVVMAAQFGDFVNNPTDTVVDPANGVLNAGGPDSRVSAISRVRLNFNTSF
SGDDLLATQLEVGNNGQDFFGNALGAQDHGPGLGTLTGSGVPLVDLGAADYAGVGNTVTLRRLAYTFKPGENLAVTVGTN
IFPSDFVDFNSYANNSAQDFSSGFFINNPLIITNAVDLNGGAGAAFDWNPNAGNISVRGVYVAAAGNVATAAANGGLGGD
PHQGTLELEYANSFGEDDQNNFAIRLQGTYAETFSIEQKVLGVNAEATFGNIGVFGRYGISFDPQNQVGVNNVDVFGAAA
PASIITAGGSNTIQTWMAGVGYKDALVPGSLFAVAAGMPYLVTGTPGSNDQINLEAFYRFPVNDNITITPAVMYIINPLG
TVNGLSAAGAGNDNDIIQGLIRATFSF
>Mature_587_residues
MKKVCLLAGSLSLLGLSALPAKAVSTSEQLPVEAQSVDVSPVTAEQDELLLADQSLSQTTSVNDLMAETKEDSVGQVTSV
SQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAMSRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAEL
ATLRGRVDGLEARVATVEAQQFSTTTKLQGEVVMAAQFGDFVNNPTDTVVDPANGVLNAGGPDSRVSAISRVRLNFNTSF
SGDDLLATQLEVGNNGQDFFGNALGAQDHGPGLGTLTGSGVPLVDLGAADYAGVGNTVTLRRLAYTFKPGENLAVTVGTN
IFPSDFVDFNSYANNSAQDFSSGFFINNPLIITNAVDLNGGAGAAFDWNPNAGNISVRGVYVAAAGNVATAAANGGLGGD
PHQGTLELEYANSFGEDDQNNFAIRLQGTYAETFSIEQKVLGVNAEATFGNIGVFGRYGISFDPQNQVGVNNVDVFGAAA
PASIITAGGSNTIQTWMAGVGYKDALVPGSLFAVAAGMPYLVTGTPGSNDQINLEAFYRFPVNDNITITPAVMYIINPLG
TVNGLSAAGAGNDNDIIQGLIRATFSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049
- InterPro:   IPR001119 [H]

Pfam domain/function: PF04966 OprB; PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 61203; Mature: 61203

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS01072 SLH_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVCLLAGSLSLLGLSALPAKAVSTSEQLPVEAQSVDVSPVTAEQDELLLADQSLSQTT
CCCEEEEECCHHHHHHHCCCCHHHCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCHHHHC
SVNDLMAETKEDSVGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAM
CHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH
SRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHH
QFSTTTKLQGEVVMAAQFGDFVNNPTDTVVDPANGVLNAGGPDSRVSAISRVRLNFNTSF
HHCCCEEECCCEEEEEEHHHHHCCCCCCEECCCCCEECCCCCHHHHHHEEEEEEEECCCC
SGDDLLATQLEVGNNGQDFFGNALGAQDHGPGLGTLTGSGVPLVDLGAADYAGVGNTVTL
CCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCEEE
RRLAYTFKPGENLAVTVGTNIFPSDFVDFNSYANNSAQDFSSGFFINNPLIITNAVDLNG
EEEEEEECCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHCCCEEECCCEEEEEEEECCC
GAGAAFDWNPNAGNISVRGVYVAAAGNVATAAANGGLGGDPHQGTLELEYANSFGEDDQN
CCCCEEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCC
NFAIRLQGTYAETFSIEQKVLGVNAEATFGNIGVFGRYGISFDPQNQVGVNNVDVFGAAA
CEEEEEEECCHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCC
PASIITAGGSNTIQTWMAGVGYKDALVPGSLFAVAAGMPYLVTGTPGSNDQINLEAFYRF
CCEEEECCCCCHHHHHHHCCCCCHHCCCCHHHHHHCCCCEEEECCCCCCCEEEEEEEEEE
PVNDNITITPAVMYIINPLGTVNGLSAAGAGNDNDIIQGLIRATFSF
CCCCCEEEHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVCLLAGSLSLLGLSALPAKAVSTSEQLPVEAQSVDVSPVTAEQDELLLADQSLSQTT
CCCEEEEECCHHHHHHHCCCCHHHCCCCCCCCCHHCCCCCCCCCCCCCEEEECCCHHHHC
SVNDLMAETKEDSVGQVTSVSQLSDVQPDDWAFQAIQSLVERYGCVAGYPNGTFRPSRAM
CHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHH
SRREAAALVNACLDNLSNRFATKEDLDALKALQDEFAAELATLRGRVDGLEARVATVEAQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHH
QFSTTTKLQGEVVMAAQFGDFVNNPTDTVVDPANGVLNAGGPDSRVSAISRVRLNFNTSF
HHCCCEEECCCEEEEEEHHHHHCCCCCCEECCCCCEECCCCCHHHHHHEEEEEEEECCCC
SGDDLLATQLEVGNNGQDFFGNALGAQDHGPGLGTLTGSGVPLVDLGAADYAGVGNTVTL
CCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCEEE
RRLAYTFKPGENLAVTVGTNIFPSDFVDFNSYANNSAQDFSSGFFINNPLIITNAVDLNG
EEEEEEECCCCCEEEEECCCCCCCCCCCCHHHCCCCHHHHCCCEEECCCEEEEEEEECCC
GAGAAFDWNPNAGNISVRGVYVAAAGNVATAAANGGLGGDPHQGTLELEYANSFGEDDQN
CCCCEEECCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCC
NFAIRLQGTYAETFSIEQKVLGVNAEATFGNIGVFGRYGISFDPQNQVGVNNVDVFGAAA
CEEEEEEECCHHHHHHHHHHEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCC
PASIITAGGSNTIQTWMAGVGYKDALVPGSLFAVAAGMPYLVTGTPGSNDQINLEAFYRF
CCEEEECCCCCHHHHHHHCCCCCHHCCCCHHHHHHCCCCEEEECCCCCCCEEEEEEEEEE
PVNDNITITPAVMYIINPLGTVNGLSAAGAGNDNDIIQGLIRATFSF
CCCCCEEEHHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]