Click here to switch to the map view.

The map label for this gene is pilH [H]

Identifier: 158337043

GI number: 158337043

Start: 3969333

End: 3969875

Strand: Direct

Name: pilH [H]

Synonym: AM1_3916

Alternate gene names: 158337043

Gene position: 3969333-3969875 (Clockwise)

Preceding gene: 158337041

Following gene: 158337046

Centisome position: 61.03

GC content: 46.41

Gene sequence:

>543_bases
GTGGCAGGTCACAAAATCTTAGTGATTGACGACAGTAAGGTCATTCGTATGCGTGTCCGGGATATGCTGCCGGAAGGTGA
CTTTCAGGTGTTAGAAGCTAAGGATGGTGCAGAAGGCTTAAACTTGATTCGGCAAGAACGCCCTACTTTAATCATGTTGG
ACTTTCTGTTACCCCGAGTTAGTGGTTGGGAAGTCTATCAAGAACTGCAAAATGAAAATGATCTGCAGTCCATTCCCCTG
GTGATCATGTCAGGCCGGAAGGAAGAAGTTACCGATAAGCTGACAGAACCCTTCGAATTTTTTGAATTTATTGAAAAGCC
TTTTGAGAAACATCAATTGCAAAAGGCGATTAAAGGTGCCTTTACCAAGTCGCGACTACCTCGACTCCGCACGGAAGCCA
GCAAGCCTGCAGAAGCTGCTCCTGCCGTCGACAATACTGAGGTCATTGAATTGCGCCAGCGAGTTGAAGCCATGGAAACT
GAGATTGCTAACTTGAAGCGGGCGTTGACTCAGCTTGTGAACTTCGTCAAGCAAAAGCTTTAA

Upstream 100 bases:

>100_bases
AGGCAAGATTCTTGTTCAATCTGATGCATTATCAAGAGATTGTTTAGAACTAGACTGGTATTTTTCAGCCCTTACTCATT
AGTGGATGTAGGAGTTAAGC

Downstream 100 bases:

>100_bases
GAATTTAGCTCAATCCATTTAATCCAAATCTCGTCGCCCTTCTAGTGCTCTAGCAAGGGTGACTTCGTCTGCATATTCTA
AGTCACCTCCCATGGGGAGA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAGHKILVIDDSKVIRMRVRDMLPEGDFQVLEAKDGAEGLNLIRQERPTLIMLDFLLPRVSGWEVYQELQNENDLQSIPL
VIMSGRKEEVTDKLTEPFEFFEFIEKPFEKHQLQKAIKGAFTKSRLPRLRTEASKPAEAAPAVDNTEVIELRQRVEAMET
EIANLKRALTQLVNFVKQKL

Sequences:

>Translated_180_residues
MAGHKILVIDDSKVIRMRVRDMLPEGDFQVLEAKDGAEGLNLIRQERPTLIMLDFLLPRVSGWEVYQELQNENDLQSIPL
VIMSGRKEEVTDKLTEPFEFFEFIEKPFEKHQLQKAIKGAFTKSRLPRLRTEASKPAEAAPAVDNTEVIELRQRVEAMET
EIANLKRALTQLVNFVKQKL
>Mature_179_residues
AGHKILVIDDSKVIRMRVRDMLPEGDFQVLEAKDGAEGLNLIRQERPTLIMLDFLLPRVSGWEVYQELQNENDLQSIPLV
IMSGRKEEVTDKLTEPFEFFEFIEKPFEKHQLQKAIKGAFTKSRLPRLRTEASKPAEAAPAVDNTEVIELRQRVEAMETE
IANLKRALTQLVNFVKQKL

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=119, Percent_Identity=31.9327731092437, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 20730; Mature: 20599

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHKILVIDDSKVIRMRVRDMLPEGDFQVLEAKDGAEGLNLIRQERPTLIMLDFLLPRV
CCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEHHHHHCCC
SGWEVYQELQNENDLQSIPLVIMSGRKEEVTDKLTEPFEFFEFIEKPFEKHQLQKAIKGA
CHHHHHHHHCCCCCHHHCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FTKSRLPRLRTEASKPAEAAPAVDNTEVIELRQRVEAMETEIANLKRALTQLVNFVKQKL
HHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGHKILVIDDSKVIRMRVRDMLPEGDFQVLEAKDGAEGLNLIRQERPTLIMLDFLLPRV
CCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEHHHHHCCC
SGWEVYQELQNENDLQSIPLVIMSGRKEEVTDKLTEPFEFFEFIEKPFEKHQLQKAIKGA
CHHHHHHHHCCCCCHHHCCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
FTKSRLPRLRTEASKPAEAAPAVDNTEVIELRQRVEAMETEIANLKRALTQLVNFVKQKL
HHHHHCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]