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The map label for this gene is clpS [H]

Identifier: 158337023

GI number: 158337023

Start: 3945689

End: 3945985

Strand: Reverse

Name: clpS [H]

Synonym: AM1_3896

Alternate gene names: 158337023

Gene position: 3945985-3945689 (Counterclockwise)

Preceding gene: 158337030

Following gene: 158337022

Centisome position: 60.67

GC content: 45.79

Gene sequence:

>297_bases
GTGCAAACACCTGTTACCCGCCCTGAAGAAAAACAGGCACAAAAAACGGTTCGGAAACCCTATCCGAATTTCAAGGTGAT
TGTGGTCAATGATGATGTCAATACGTTTGAGCATGTGGCTAAAACATTAATGACCTATATTCCCCATATGACGTCTGACA
AGGCTTGGGAATTAACCAATCAAATTCATTTCGAAGGCCAGGCCATTGTTTGGGTCGGTCCTCAAGAACAAGCTGAACTC
TATCATATGCAGCTCCAGCGAGCGGGTTTAACCATGGCTCCCTTGGAGGCCGCTTAA

Upstream 100 bases:

>100_bases
CAAGCTAAACTAATGTAAACTAATTAATTTCTTAACTTTAATAATTAAGCTCATGCTTAAGCTTTCTGAGCTAGATAGTC
CACGCATGGCGATCACCGCA

Downstream 100 bases:

>100_bases
GGGATGTCTGGCAATAAAGGCCGATTAGTGCTGAATCACTCTACCCATATTCCCGGCTTGCTTGAGATTTTAGGAAAATT
GATTCACTATCCAGGCATTC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MQTPVTRPEEKQAQKTVRKPYPNFKVIVVNDDVNTFEHVAKTLMTYIPHMTSDKAWELTNQIHFEGQAIVWVGPQEQAEL
YHMQLQRAGLTMAPLEAA

Sequences:

>Translated_98_residues
MQTPVTRPEEKQAQKTVRKPYPNFKVIVVNDDVNTFEHVAKTLMTYIPHMTSDKAWELTNQIHFEGQAIVWVGPQEQAEL
YHMQLQRAGLTMAPLEAA
>Mature_98_residues
MQTPVTRPEEKQAQKTVRKPYPNFKVIVVNDDVNTFEHVAKTLMTYIPHMTSDKAWELTNQIHFEGQAIVWVGPQEQAEL
YHMQLQRAGLTMAPLEAA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11263; Mature: 11263

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPVTRPEEKQAQKTVRKPYPNFKVIVVNDDVNTFEHVAKTLMTYIPHMTSDKAWELTN
CCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHCC
QIHFEGQAIVWVGPQEQAELYHMQLQRAGLTMAPLEAA
EEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQTPVTRPEEKQAQKTVRKPYPNFKVIVVNDDVNTFEHVAKTLMTYIPHMTSDKAWELTN
CCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHCC
QIHFEGQAIVWVGPQEQAELYHMQLQRAGLTMAPLEAA
EEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]