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The map label for this gene is psbV [H]

Identifier: 158337013

GI number: 158337013

Start: 3937176

End: 3937640

Strand: Direct

Name: psbV [H]

Synonym: AM1_3886

Alternate gene names: 158337013

Gene position: 3937176-3937640 (Clockwise)

Preceding gene: 158337012

Following gene: 158337014

Centisome position: 60.54

GC content: 45.38

Gene sequence:

>465_bases
TTGGGAGTTTTCCCCAACAGTTCCATCGCCCAAGCTGGAGATATTGAGGACTATATTGTTCGGTATCTCAAGGTGACAGA
ACCTGTCCCTATCGTGATGGACGCTTCTGGAGAGACCCAATTGTTTTCTCCAGAAGAGCTATCAGATGGGAAACGGTTAT
TTGACGATAACTGTAAGAATTGCCATGTAGGTGGAGCGACATTGCCTAATCCTGTGCAATCTTTGTCAATGAAGAATTTG
CAGGGGGCAACCCCTTCTCGGGATAACGTTGCTAATCTCATTGAATTTCAACGAGAGCCAACCATTTATGATGGTAGCGA
TGTTAGCTTTTGGTGCCGCCAGGTCCCGGATACTTGGCTGCCCGATAAAGAATTGGCAAATCTAGAAGCCTTTATTCTCA
GAGCTGCTGAAGTAGCTAGAGGTTGGGGTACTGAAGATGTTGCTGATGGCATAGATTTTACTTAA

Upstream 100 bases:

>100_bases
GTATGAACGACGTTATCTTTATAAAGTTCATATTCGAGGCGGGCATCAAATGCTGAAATCGTGGCTCAAATGTTGTTTTC
TTGCAGTTCTTTGGGTTTGT

Downstream 100 bases:

>100_bases
GGTATTTGTCCTTAGAATTGCTTTAATCAAAGGATTAGTGCAATATCGATGCCGTTAAGGAAAGACTTGTAATCCTATGA
ACTCTCCGTTTGGGGTTCTA

Product: cytochrome c-550

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGVFPNSSIAQAGDIEDYIVRYLKVTEPVPIVMDASGETQLFSPEELSDGKRLFDDNCKNCHVGGATLPNPVQSLSMKNL
QGATPSRDNVANLIEFQREPTIYDGSDVSFWCRQVPDTWLPDKELANLEAFILRAAEVARGWGTEDVADGIDFT

Sequences:

>Translated_154_residues
MGVFPNSSIAQAGDIEDYIVRYLKVTEPVPIVMDASGETQLFSPEELSDGKRLFDDNCKNCHVGGATLPNPVQSLSMKNL
QGATPSRDNVANLIEFQREPTIYDGSDVSFWCRQVPDTWLPDKELANLEAFILRAAEVARGWGTEDVADGIDFT
>Mature_153_residues
GVFPNSSIAQAGDIEDYIVRYLKVTEPVPIVMDASGETQLFSPEELSDGKRLFDDNCKNCHVGGATLPNPVQSLSMKNLQ
GATPSRDNVANLIEFQREPTIYDGSDVSFWCRQVPDTWLPDKELANLEAFILRAAEVARGWGTEDVADGIDFT

Specific function: Can partially replace cytochrome c-550 (psbV) function [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family. PsbV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR016003
- InterPro:   IPR017490 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16968; Mature: 16837

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFPNSSIAQAGDIEDYIVRYLKVTEPVPIVMDASGETQLFSPEELSDGKRLFDDNCKN
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHCCCHHHHHCCCCC
CHVGGATLPNPVQSLSMKNLQGATPSRDNVANLIEFQREPTIYDGSDVSFWCRQVPDTWL
EECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHCCCCCC
PDKELANLEAFILRAAEVARGWGTEDVADGIDFT
CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure 
GVFPNSSIAQAGDIEDYIVRYLKVTEPVPIVMDASGETQLFSPEELSDGKRLFDDNCKN
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHCCCHHHHHCCCCC
CHVGGATLPNPVQSLSMKNLQGATPSRDNVANLIEFQREPTIYDGSDVSFWCRQVPDTWL
EECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHCCCCCC
PDKELANLEAFILRAAEVARGWGTEDVADGIDFT
CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11427679; 12240834 [H]