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The map label for this gene is yfgF [C]

Identifier: 158337002

GI number: 158337002

Start: 3926624

End: 3928450

Strand: Direct

Name: yfgF [C]

Synonym: AM1_3875

Alternate gene names: 158337002

Gene position: 3926624-3928450 (Clockwise)

Preceding gene: 158336992

Following gene: 158337003

Centisome position: 60.38

GC content: 46.09

Gene sequence:

>1827_bases
ATGCACGCATTTGGCTCACAAGTTATTCCAGTCAGTAATACCGAGATCTTGATGATTGAGGATGATATTCAAGATGTCGA
AATCGTAACGCGATTATTGGGGAAAGAAAAACAAAGCTCCATCATGCTCAACCATTGTCCAACCTTGCATGCTGGTTTGG
ATACCCTGAGAGAACAGTCCAAAATTGATTTGGTGTTGCTGGATTTATCTCTATCTGATGCTCAAGGACTGGAAACATTT
CGGAAAATCCATGAAGCTTTTCCAAATATCCCTTTGATTATTCTAAGTGGTAATAGTGATGAGCGGATTGCCTTAGAGGC
AATGCAACAAGGTGCCCAGGATTTTCTCGTCAAAGGACGATTTGACAGTACGGTTCTGACCCGCGCGATTCAATATGCAA
TGGAGCGCCAGCATCAGCGCCTGGAGCTTGAATATAAGAATCTGGCCTTAAAAGCGCTATCGGATCAGCTAGCTGTGGCT
AACCTAGAGCTGGAAAGGTTGGCTGCCGTCGACAGTTTGACCCGTGTCTATAATCGGCGACGATTCGATGAGGTGTTTCT
AACGGAGTGGAATCGCTTACTCCGCGAGGAAAAACCTTTGTCTTTAATTATGTGTGATGTTGACCATTTCAAAGCCTACA
ACGATACCTATGGCCATCAAGCTGGTGATTTGTGCCTGGAGAAAATTGCTCAAACGATTGCCAAAGTTGCTAAGCGTCCG
GCAGACTGTGTTGCTCGGTATGGTGGAGAAGAGTTTGTCGTTGTGCTGCCCAATACGGATATCAGCGGGGCAACCCATGT
AGCGGAAGCCATCCGTGGGGCGGTTCATAATCTTAACCTGCCCCATTCTACCTCGCCGATTAGTAACCGCATCACCCTTA
GTTTGGGCGTTGCTTGTCAAGTGCCGGATGAGGCGATTGCCCCTTCTTTGTTGATTGAAGCTGCCGATCGAGCCATGTAT
ACGGCGAAAGAAGGAGGGCGAGATCGCATGCAAGTGCACTATGCAGATTGCGCCGTTAATCTTCAGTCTCGACAAACCTT
GCAGTGGGTGAGCCGATTACGGGATGCCCTTGAGCATAATCAGTTTGAATTATATGCCCAGCCCATTCAAGCGTTGCAGG
CGAATACCTCTGAACCTTGCTTTGAAATTCTGCTGCGTTTATGTGATCAGCCGGGTATTGTGTGTTCCCCTGGTATGTTT
TTTCCCGTGGCTGAGCAGTATGATTTTATGCCCCGTATTGATCGGTGGGTAATCAAGCATTTATTTGCAGACTTAGGCGA
AATTAATTCCTTAATGTTGCAAGAAGCGATATTTTTCGTGAATTTATCCGGGGCAACATTCAAAAATATGGAAATTGCCT
CTTTTATTGCAGAACAACTGGCTCGGCATAATTTAAGACCCGAGCAGTTCTGCTTTGAAGTTTCTGAAACGGTTGCCCTG
AAAAATATTGAAGCCGCTGCTCAACTCACCAAAGCCTTGAAAGATATGGGGTGTAAAGTCGCTTTAGATGATTTTGGCAG
CGGCTTGTCATCGTTTACCCATTTGAAAAAGATTCCCGCTGACTTTGTCAAAATCGATGGCTCTTTTATTCGAGGTGTGG
TCGATGACGATATGTCTAAAGGCGTGGTGGAAGCCATTCATCATGTTTCGAAAATTATGGGTCTGCAGACCATTGCAGAG
TATGTGGAATCGCGGGCCATTCTAGATCTGCTCAATGATTTTCATATTGACTTCGCCCAGGGCCATTACTTTGGACCGGC
ACGTCCCTTGGTAGATACCCTCGCTACTTGGCAAACTACTGCTTATACTGAGCGCTTGTCTGCGTAA

Upstream 100 bases:

>100_bases
TTTATGGGGGGATCAGCAAATAAATCATCAGCCGTACCCAACACAAGGTGCGGCTGATAGAGAGGTTCAGCCTCTAGCTC
ATACGGGGGATTCCAGGTAC

Downstream 100 bases:

>100_bases
CAAAAGGGGAGGGATCAAGGTGACTTCTAGATGTCTTTGCAATGTTCCTTAGGACTTTGTTGCATTCTGTAGCAGAAAGT
AACGGCTATTGCATTGCTTT

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MHAFGSQVIPVSNTEILMIEDDIQDVEIVTRLLGKEKQSSIMLNHCPTLHAGLDTLREQSKIDLVLLDLSLSDAQGLETF
RKIHEAFPNIPLIILSGNSDERIALEAMQQGAQDFLVKGRFDSTVLTRAIQYAMERQHQRLELEYKNLALKALSDQLAVA
NLELERLAAVDSLTRVYNRRRFDEVFLTEWNRLLREEKPLSLIMCDVDHFKAYNDTYGHQAGDLCLEKIAQTIAKVAKRP
ADCVARYGGEEFVVVLPNTDISGATHVAEAIRGAVHNLNLPHSTSPISNRITLSLGVACQVPDEAIAPSLLIEAADRAMY
TAKEGGRDRMQVHYADCAVNLQSRQTLQWVSRLRDALEHNQFELYAQPIQALQANTSEPCFEILLRLCDQPGIVCSPGMF
FPVAEQYDFMPRIDRWVIKHLFADLGEINSLMLQEAIFFVNLSGATFKNMEIASFIAEQLARHNLRPEQFCFEVSETVAL
KNIEAAAQLTKALKDMGCKVALDDFGSGLSSFTHLKKIPADFVKIDGSFIRGVVDDDMSKGVVEAIHHVSKIMGLQTIAE
YVESRAILDLLNDFHIDFAQGHYFGPARPLVDTLATWQTTAYTERLSA

Sequences:

>Translated_608_residues
MHAFGSQVIPVSNTEILMIEDDIQDVEIVTRLLGKEKQSSIMLNHCPTLHAGLDTLREQSKIDLVLLDLSLSDAQGLETF
RKIHEAFPNIPLIILSGNSDERIALEAMQQGAQDFLVKGRFDSTVLTRAIQYAMERQHQRLELEYKNLALKALSDQLAVA
NLELERLAAVDSLTRVYNRRRFDEVFLTEWNRLLREEKPLSLIMCDVDHFKAYNDTYGHQAGDLCLEKIAQTIAKVAKRP
ADCVARYGGEEFVVVLPNTDISGATHVAEAIRGAVHNLNLPHSTSPISNRITLSLGVACQVPDEAIAPSLLIEAADRAMY
TAKEGGRDRMQVHYADCAVNLQSRQTLQWVSRLRDALEHNQFELYAQPIQALQANTSEPCFEILLRLCDQPGIVCSPGMF
FPVAEQYDFMPRIDRWVIKHLFADLGEINSLMLQEAIFFVNLSGATFKNMEIASFIAEQLARHNLRPEQFCFEVSETVAL
KNIEAAAQLTKALKDMGCKVALDDFGSGLSSFTHLKKIPADFVKIDGSFIRGVVDDDMSKGVVEAIHHVSKIMGLQTIAE
YVESRAILDLLNDFHIDFAQGHYFGPARPLVDTLATWQTTAYTERLSA
>Mature_608_residues
MHAFGSQVIPVSNTEILMIEDDIQDVEIVTRLLGKEKQSSIMLNHCPTLHAGLDTLREQSKIDLVLLDLSLSDAQGLETF
RKIHEAFPNIPLIILSGNSDERIALEAMQQGAQDFLVKGRFDSTVLTRAIQYAMERQHQRLELEYKNLALKALSDQLAVA
NLELERLAAVDSLTRVYNRRRFDEVFLTEWNRLLREEKPLSLIMCDVDHFKAYNDTYGHQAGDLCLEKIAQTIAKVAKRP
ADCVARYGGEEFVVVLPNTDISGATHVAEAIRGAVHNLNLPHSTSPISNRITLSLGVACQVPDEAIAPSLLIEAADRAMY
TAKEGGRDRMQVHYADCAVNLQSRQTLQWVSRLRDALEHNQFELYAQPIQALQANTSEPCFEILLRLCDQPGIVCSPGMF
FPVAEQYDFMPRIDRWVIKHLFADLGEINSLMLQEAIFFVNLSGATFKNMEIASFIAEQLARHNLRPEQFCFEVSETVAL
KNIEAAAQLTKALKDMGCKVALDDFGSGLSSFTHLKKIPADFVKIDGSFIRGVVDDDMSKGVVEAIHHVSKIMGLQTIAE
YVESRAILDLLNDFHIDFAQGHYFGPARPLVDTLATWQTTAYTERLSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

Organism=Escherichia coli, GI1788849, Length=245, Percent_Identity=36.3265306122449, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1787541, Length=432, Percent_Identity=29.1666666666667, Blast_Score=155, Evalue=7e-39,
Organism=Escherichia coli, GI87081921, Length=440, Percent_Identity=25.6818181818182, Blast_Score=139, Evalue=7e-34,
Organism=Escherichia coli, GI1790496, Length=240, Percent_Identity=32.0833333333333, Blast_Score=124, Evalue=3e-29,
Organism=Escherichia coli, GI87082096, Length=407, Percent_Identity=25.0614250614251, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1788381, Length=431, Percent_Identity=25.0580046403712, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI226510982, Length=361, Percent_Identity=29.6398891966759, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1787262, Length=173, Percent_Identity=35.2601156069364, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI145693134, Length=167, Percent_Identity=35.9281437125749, Blast_Score=100, Evalue=5e-22,
Organism=Escherichia coli, GI1786584, Length=179, Percent_Identity=31.8435754189944, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI87081881, Length=168, Percent_Identity=38.6904761904762, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87082007, Length=181, Percent_Identity=35.9116022099448, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI87081743, Length=243, Percent_Identity=26.3374485596708, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1787816, Length=162, Percent_Identity=37.6543209876543, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1786507, Length=250, Percent_Identity=28, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081845, Length=237, Percent_Identity=27.8481012658228, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1788502, Length=254, Percent_Identity=25.9842519685039, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081980, Length=246, Percent_Identity=26.8292682926829, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787802, Length=163, Percent_Identity=32.5153374233129, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788085, Length=170, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081977, Length=182, Percent_Identity=32.4175824175824, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87081974, Length=205, Percent_Identity=26.3414634146341, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1787055, Length=268, Percent_Identity=22.7611940298507, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788956, Length=193, Percent_Identity=31.6062176165803, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 68073; Mature: 68073

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAFGSQVIPVSNTEILMIEDDIQDVEIVTRLLGKEKQSSIMLNHCPTLHAGLDTLREQS
CCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCHHCCEEHHCCCCHHHHHHHHHHCC
KIDLVLLDLSLSDAQGLETFRKIHEAFPNIPLIILSGNSDERIALEAMQQGAQDFLVKGR
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHCCC
FDSTVLTRAIQYAMERQHQRLELEYKNLALKALSDQLAVANLELERLAAVDSLTRVYNRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFDEVFLTEWNRLLREEKPLSLIMCDVDHFKAYNDTYGHQAGDLCLEKIAQTIAKVAKRP
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
ADCVARYGGEEFVVVLPNTDISGATHVAEAIRGAVHNLNLPHSTSPISNRITLSLGVACQ
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEE
VPDEAIAPSLLIEAADRAMYTAKEGGRDRMQVHYADCAVNLQSRQTLQWVSRLRDALEHN
CCHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHEEEHHHHHHHHHHHHHHHHHHCC
QFELYAQPIQALQANTSEPCFEILLRLCDQPGIVCSPGMFFPVAEQYDFMPRIDRWVIKH
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCCCCCCHHHCCCCHHHHHHHHHH
LFADLGEINSLMLQEAIFFVNLSGATFKNMEIASFIAEQLARHNLRPEQFCFEVSETVAL
HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KNIEAAAQLTKALKDMGCKVALDDFGSGLSSFTHLKKIPADFVKIDGSFIRGVVDDDMSK
HHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHCCHHHHEECHHHHHHHHHCHHHH
GVVEAIHHVSKIMGLQTIAEYVESRAILDLLNDFHIDFAQGHYFGPARPLVDTLATWQTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AYTERLSA
HHHHHHCC
>Mature Secondary Structure
MHAFGSQVIPVSNTEILMIEDDIQDVEIVTRLLGKEKQSSIMLNHCPTLHAGLDTLREQS
CCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHCCCHHCCEEHHCCCCHHHHHHHHHHCC
KIDLVLLDLSLSDAQGLETFRKIHEAFPNIPLIILSGNSDERIALEAMQQGAQDFLVKGR
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHCCC
FDSTVLTRAIQYAMERQHQRLELEYKNLALKALSDQLAVANLELERLAAVDSLTRVYNRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFDEVFLTEWNRLLREEKPLSLIMCDVDHFKAYNDTYGHQAGDLCLEKIAQTIAKVAKRP
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC
ADCVARYGGEEFVVVLPNTDISGATHVAEAIRGAVHNLNLPHSTSPISNRITLSLGVACQ
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEE
VPDEAIAPSLLIEAADRAMYTAKEGGRDRMQVHYADCAVNLQSRQTLQWVSRLRDALEHN
CCHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHEEEHHHHHHHHHHHHHHHHHHCC
QFELYAQPIQALQANTSEPCFEILLRLCDQPGIVCSPGMFFPVAEQYDFMPRIDRWVIKH
CHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEECCCCCCCCHHHCCCCHHHHHHHHHH
LFADLGEINSLMLQEAIFFVNLSGATFKNMEIASFIAEQLARHNLRPEQFCFEVSETVAL
HHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KNIEAAAQLTKALKDMGCKVALDDFGSGLSSFTHLKKIPADFVKIDGSFIRGVVDDDMSK
HHHHHHHHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHCCHHHHEECHHHHHHHHHCHHHH
GVVEAIHHVSKIMGLQTIAEYVESRAILDLLNDFHIDFAQGHYFGPARPLVDTLATWQTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
AYTERLSA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]