Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is yahD [C]

Identifier: 158336950

GI number: 158336950

Start: 3870205

End: 3870756

Strand: Reverse

Name: yahD [C]

Synonym: AM1_3821

Alternate gene names: 158336950

Gene position: 3870756-3870205 (Counterclockwise)

Preceding gene: 158336953

Following gene: 158336948

Centisome position: 59.52

GC content: 44.93

Gene sequence:

>552_bases
GTGACTTTAGCTAATGATGTATTGGCCTTACAACAGCTTATTAAACAGGGCGCTGATGTGAACATCCACTACAGGGCAGC
AGAGAGACTCACGCCATTAATTCAAGCGATTAACTTGCAACGAGTTGAAATCGTCGAAACGCTCTTATTGGCAGGGGCAG
ATGTCCATCAAAGTCAATATGAGATAACCATGCCCTTGTGGATTGCGACGGATGTCGGGAATCTAGACATCGTTAAGCTG
TTGCTCAATGAAGGTGCTAATCCAAACCGTGGCGATGTTACTTCCGCCCCTCTTCACCTGGCCATTGCCAAAGACACTCC
AGATATCGTTGAAGCACTCATTCAAGCACATGCTGATCTCAACCGGACATGTGCCTTAGGGTATACCCCATTAATGACGG
CTGCATCCAAAGGCAATTTGATGCTCTGTAAACGTTTAGTACAAGCGGGTGCAACCATTGACATTCATGATAATTATGGT
GATACCGCTTTGACAATTGCGGAATCTTTAGACCATCAAGATATTGTCAACTTTCTACAGTCCAAGACCTAA

Upstream 100 bases:

>100_bases
TGAAATCACGCTTTACTCATGCTAAGGTTCCACCACAGCAATACAGCTATCTTGCAACGTTATGCGAACAATCGACTCGC
TTGAGCAACAAATATGCCGA

Downstream 100 bases:

>100_bases
CCCACCACATATTGGAGATCCCCTTCTACTTTGCAGACTGCAAGCCACGAATGAGAGTATTGGGAATCACCGCATCATCC
CAAGTTTTGGGTTTTTCTCC

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTLANDVLALQQLIKQGADVNIHYRAAERLTPLIQAINLQRVEIVETLLLAGADVHQSQYEITMPLWIATDVGNLDIVKL
LLNEGANPNRGDVTSAPLHLAIAKDTPDIVEALIQAHADLNRTCALGYTPLMTAASKGNLMLCKRLVQAGATIDIHDNYG
DTALTIAESLDHQDIVNFLQSKT

Sequences:

>Translated_183_residues
MTLANDVLALQQLIKQGADVNIHYRAAERLTPLIQAINLQRVEIVETLLLAGADVHQSQYEITMPLWIATDVGNLDIVKL
LLNEGANPNRGDVTSAPLHLAIAKDTPDIVEALIQAHADLNRTCALGYTPLMTAASKGNLMLCKRLVQAGATIDIHDNYG
DTALTIAESLDHQDIVNFLQSKT
>Mature_182_residues
TLANDVLALQQLIKQGADVNIHYRAAERLTPLIQAINLQRVEIVETLLLAGADVHQSQYEITMPLWIATDVGNLDIVKLL
LNEGANPNRGDVTSAPLHLAIAKDTPDIVEALIQAHADLNRTCALGYTPLMTAASKGNLMLCKRLVQAGATIDIHDNYGD
TALTIAESLDHQDIVNFLQSKT

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI46519151, Length=179, Percent_Identity=36.8715083798883, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI46519154, Length=179, Percent_Identity=36.8715083798883, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI52426735, Length=170, Percent_Identity=33.5294117647059, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI46519147, Length=178, Percent_Identity=37.0786516853933, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI37620163, Length=178, Percent_Identity=37.0786516853933, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI32967601, Length=168, Percent_Identity=32.1428571428571, Blast_Score=78, Evalue=5e-15,
Organism=Homo sapiens, GI38683816, Length=175, Percent_Identity=36, Blast_Score=77, Evalue=7e-15,
Organism=Homo sapiens, GI163914396, Length=153, Percent_Identity=33.9869281045752, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI7705748, Length=153, Percent_Identity=33.9869281045752, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI52426737, Length=170, Percent_Identity=33.5294117647059, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI188595682, Length=170, Percent_Identity=33.5294117647059, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI55741641, Length=160, Percent_Identity=36.875, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI38683807, Length=175, Percent_Identity=36, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI30425444, Length=176, Percent_Identity=32.3863636363636, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI268607595, Length=170, Percent_Identity=34.7058823529412, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI62988328, Length=170, Percent_Identity=34.7058823529412, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI70780355, Length=158, Percent_Identity=32.2784810126582, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI70780353, Length=158, Percent_Identity=32.2784810126582, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI70780357, Length=158, Percent_Identity=32.2784810126582, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI215598574, Length=158, Percent_Identity=32.2784810126582, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI70780359, Length=158, Percent_Identity=32.2784810126582, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI22208957, Length=176, Percent_Identity=34.6590909090909, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI255982572, Length=182, Percent_Identity=32.967032967033, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI7705831, Length=182, Percent_Identity=32.967032967033, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI89363047, Length=170, Percent_Identity=31.1764705882353, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI118150656, Length=166, Percent_Identity=31.3253012048193, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI157743284, Length=174, Percent_Identity=30.4597701149425, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI22208951, Length=143, Percent_Identity=34.2657342657343, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI67906195, Length=187, Percent_Identity=30.4812834224599, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI68131557, Length=173, Percent_Identity=31.7919075144509, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI42734375, Length=169, Percent_Identity=29.585798816568, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI304361760, Length=169, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI304361757, Length=169, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI24308163, Length=145, Percent_Identity=34.4827586206897, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI70995267, Length=153, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI17864094, Length=169, Percent_Identity=32.5443786982249, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI18252778, Length=176, Percent_Identity=28.9772727272727, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI24233530, Length=172, Percent_Identity=36.046511627907, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI116063534, Length=130, Percent_Identity=34.6153846153846, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI267844887, Length=137, Percent_Identity=36.4963503649635, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI7657265, Length=191, Percent_Identity=32.4607329842932, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71981411, Length=168, Percent_Identity=32.1428571428571, Blast_Score=81, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI71981414, Length=168, Percent_Identity=32.1428571428571, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI25145251, Length=168, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI71981389, Length=168, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17542700, Length=168, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17541898, Length=175, Percent_Identity=33.1428571428571, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17541900, Length=175, Percent_Identity=33.1428571428571, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193206533, Length=175, Percent_Identity=33.1428571428571, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193206531, Length=175, Percent_Identity=33.1428571428571, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI212646035, Length=167, Percent_Identity=32.9341317365269, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI212646031, Length=167, Percent_Identity=32.9341317365269, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI212646033, Length=167, Percent_Identity=32.9341317365269, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28571867, Length=183, Percent_Identity=36.6120218579235, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571865, Length=183, Percent_Identity=36.6120218579235, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24581260, Length=176, Percent_Identity=32.3863636363636, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24581258, Length=176, Percent_Identity=32.3863636363636, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281359521, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281359519, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558752, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558750, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558756, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28558754, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161082096, Length=154, Percent_Identity=33.1168831168831, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161082110, Length=154, Percent_Identity=33.1168831168831, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161082106, Length=154, Percent_Identity=33.1168831168831, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161082081, Length=154, Percent_Identity=33.1168831168831, Blast_Score=71, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24656436, Length=191, Percent_Identity=32.9842931937173, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24583835, Length=182, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI221330482, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330474, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330478, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330480, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28573593, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24656431, Length=168, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356741, Length=171, Percent_Identity=32.7485380116959, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221330476, Length=178, Percent_Identity=32.5842696629214, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281363919, Length=178, Percent_Identity=32.5842696629214, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550479, Length=178, Percent_Identity=32.5842696629214, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45551135, Length=178, Percent_Identity=32.5842696629214, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161082089, Length=154, Percent_Identity=33.1168831168831, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161082085, Length=154, Percent_Identity=33.1168831168831, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082099, Length=154, Percent_Identity=33.1168831168831, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161082092, Length=174, Percent_Identity=31.6091954022989, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281365881, Length=142, Percent_Identity=31.6901408450704, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI161078304, Length=169, Percent_Identity=32.5443786982249, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI281365883, Length=142, Percent_Identity=31.6901408450704, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 19869; Mature: 19738

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MTLANDVLALQQLIKQGADVNIHYRAAERLTPLIQAINLQRVEIVETLLLAGADVHQSQY
CCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCE
EITMPLWIATDVGNLDIVKLLLNEGANPNRGDVTSAPLHLAIAKDTPDIVEALIQAHADL
EEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCC
NRTCALGYTPLMTAASKGNLMLCKRLVQAGATIDIHDNYGDTALTIAESLDHQDIVNFLQ
CCEEECCCHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHH
SKT
CCC
>Mature Secondary Structure 
TLANDVLALQQLIKQGADVNIHYRAAERLTPLIQAINLQRVEIVETLLLAGADVHQSQY
CCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCE
EITMPLWIATDVGNLDIVKLLLNEGANPNRGDVTSAPLHLAIAKDTPDIVEALIQAHADL
EEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCC
NRTCALGYTPLMTAASKGNLMLCKRLVQAGATIDIHDNYGDTALTIAESLDHQDIVNFLQ
CCEEECCCHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHH
SKT
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA