| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is dipZ [H]
Identifier: 158336943
GI number: 158336943
Start: 3865794
End: 3866393
Strand: Reverse
Name: dipZ [H]
Synonym: AM1_3814
Alternate gene names: 158336943
Gene position: 3866393-3865794 (Counterclockwise)
Preceding gene: 158336945
Following gene: 158336942
Centisome position: 59.45
GC content: 49.83
Gene sequence:
>600_bases ATGAGCTTCTTTCAACCTCAGCGGCGTAAACTGTTATCCCTCTTGGGGTTAGGGGCGGCATCGGCTGTTGGAGCTGCATT GTTACCGCGATCGCAAAATCGTTCCGTGACCGCCTTCGAAACGCCCTCCAATACATCTCTCTGGACCAAGCGAGATGATG TGAATTTGGGCCAACCGCTCCACCCTTTTCAAGGCATTTCCCACTGGCTCAATTCTGAGCCTCTTAGCATTGCAGACCTC AAAGGAAAAGTCGTTCTTGTCCAGTTTTGGACTTTTGGCTGCATCAATAGCCAGCGCACTCTCCCCTATGTCACTCGCTG GCACCAGCAATATGCCGATCAGGGTCTACAAGTGATTGGTATTCATACCCCGGAATTTAAATATGAACATGCTGCCAGCA ATGTCCAAAAGGCTCTAGCGGAATACCAAATTGCCTATCCCGTGCCCCTAGACAACAACTATCAAACCTGGAAAGCCTAC CGTAATCGCTATTGGCCCCATCTGTTCTTAACCAATCGCGAAGGTGTGATTACCTATCACCACATTGGTGAGGGGGCCTA TCAAGAAACCGAGCAGACCATCCAAGCGCTACTAGGTTAA
Upstream 100 bases:
>100_bases GTTACTGACTGCTAGAAGTATCTCTATTTCATTGCTCAGTCTATTCTCAGTATTGGTCAGTAGAATAGGCCGTAATTATC TTGAAATCTGAGCGATTATC
Downstream 100 bases:
>100_bases GTTGAGCCATCCTCTCAAGCGGTCGATATCCTAACATGACGAAAACGGTTGATTCACTCATCGAAATTGAATTCTCTGGA TATTTTGATTAGGCTGGAAG
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSFFQPQRRKLLSLLGLGAASAVGAALLPRSQNRSVTAFETPSNTSLWTKRDDVNLGQPLHPFQGISHWLNSEPLSIADL KGKVVLVQFWTFGCINSQRTLPYVTRWHQQYADQGLQVIGIHTPEFKYEHAASNVQKALAEYQIAYPVPLDNNYQTWKAY RNRYWPHLFLTNREGVITYHHIGEGAYQETEQTIQALLG
Sequences:
>Translated_199_residues MSFFQPQRRKLLSLLGLGAASAVGAALLPRSQNRSVTAFETPSNTSLWTKRDDVNLGQPLHPFQGISHWLNSEPLSIADL KGKVVLVQFWTFGCINSQRTLPYVTRWHQQYADQGLQVIGIHTPEFKYEHAASNVQKALAEYQIAYPVPLDNNYQTWKAY RNRYWPHLFLTNREGVITYHHIGEGAYQETEQTIQALLG >Mature_198_residues SFFQPQRRKLLSLLGLGAASAVGAALLPRSQNRSVTAFETPSNTSLWTKRDDVNLGQPLHPFQGISHWLNSEPLSIADLK GKVVLVQFWTFGCINSQRTLPYVTRWHQQYADQGLQVIGIHTPEFKYEHAASNVQKALAEYQIAYPVPLDNNYQTWKAYR NRYWPHLFLTNREGVITYHHIGEGAYQETEQTIQALLG
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=121, Percent_Identity=34.7107438016529, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI116007528, Length=125, Percent_Identity=35.2, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 22697; Mature: 22566
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFQPQRRKLLSLLGLGAASAVGAALLPRSQNRSVTAFETPSNTSLWTKRDDVNLGQPL CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCC HPFQGISHWLNSEPLSIADLKGKVVLVQFWTFGCINSQRTLPYVTRWHQQYADQGLQVIG CHHHHHHHHHCCCCCEEEECCCCEEEEEEEEHHCCCCCCCCHHHHHHHHHHHHCCCEEEE IHTPEFKYEHAASNVQKALAEYQIAYPVPLDNNYQTWKAYRNRYWPHLFLTNREGVITYH EECCCCCHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEE HIGEGAYQETEQTIQALLG ECCCCHHHHHHHHHHHHHC >Mature Secondary Structure SFFQPQRRKLLSLLGLGAASAVGAALLPRSQNRSVTAFETPSNTSLWTKRDDVNLGQPL CCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCC HPFQGISHWLNSEPLSIADLKGKVVLVQFWTFGCINSQRTLPYVTRWHQQYADQGLQVIG CHHHHHHHHHCCCCCEEEECCCCEEEEEEEEHHCCCCCCCCHHHHHHHHHHHHCCCEEEE IHTPEFKYEHAASNVQKALAEYQIAYPVPLDNNYQTWKAYRNRYWPHLFLTNREGVITYH EECCCCCHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCEEEEE HIGEGAYQETEQTIQALLG ECCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]