| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158336935
Identifier: 158336935
GI number: 158336935
Start: 3860724
End: 3861218
Strand: Reverse
Name: 158336935
Synonym: AM1_3806
Alternate gene names: NA
Gene position: 3861218-3860724 (Counterclockwise)
Preceding gene: 158336940
Following gene: 158336931
Centisome position: 59.37
GC content: 49.29
Gene sequence:
>495_bases GTGTTCTTAATCGGTATTCCCCCTAGTCGGGAGTTCTATCTCAGGGATAGACTAACAGTATGCGATCGCAACCCTGCCAC CATGACTGATCAATCTAGCTCCCATGCGACCTCTTACGAAATTGTTTGCTTAGAGCACCAAGGCAGCTACTTGTACGCCG AAGTGATCCAAACCATCGAAACTCGGCAACGATCTTGGGTGCGACCCCTATTTTTACAACTGACCACCCAGAGTTCAGAA CCGGCTTACCCAGCTCAGGGCCTCTTTTCCTTTCGTCTCCAGAACTGTGCAGATTTAGTGTGGCCTTCTCAGTTCTTTCG GCCTGCCATGGACGATGAAGTCCTCCCATTTCTACTACAAATGCATACGGAAAAACCTCAGGATCAAGAAGATCCTAAGG TCGTATCAGAACGCGATCGCAAAGCTCACCAAGCCCTACGTCAGATGATTCAGCAGGTATGGCAAGCTTTTCCTGATGCG TTTGCTAGCGAGTGA
Upstream 100 bases:
>100_bases CCGCCCAGCAGAGTAAAAAGACCATAGATAAATGCGGCAAGAATGCTAGAAGTCATGATGATTCTCAAATAGGGGGGGCT TGCAACTACTGTCCCATAGT
Downstream 100 bases:
>100_bases AAGAACTGAGTAGGTAGAACCCTAAGCTTTCTTCAGCTTCTTTTGGATAGACTTAACGCGGGATTTGTTGGCCCCTAAAT CTGACTTGCCCAAACGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MFLIGIPPSREFYLRDRLTVCDRNPATMTDQSSSHATSYEIVCLEHQGSYLYAEVIQTIETRQRSWVRPLFLQLTTQSSE PAYPAQGLFSFRLQNCADLVWPSQFFRPAMDDEVLPFLLQMHTEKPQDQEDPKVVSERDRKAHQALRQMIQQVWQAFPDA FASE
Sequences:
>Translated_164_residues MFLIGIPPSREFYLRDRLTVCDRNPATMTDQSSSHATSYEIVCLEHQGSYLYAEVIQTIETRQRSWVRPLFLQLTTQSSE PAYPAQGLFSFRLQNCADLVWPSQFFRPAMDDEVLPFLLQMHTEKPQDQEDPKVVSERDRKAHQALRQMIQQVWQAFPDA FASE >Mature_164_residues MFLIGIPPSREFYLRDRLTVCDRNPATMTDQSSSHATSYEIVCLEHQGSYLYAEVIQTIETRQRSWVRPLFLQLTTQSSE PAYPAQGLFSFRLQNCADLVWPSQFFRPAMDDEVLPFLLQMHTEKPQDQEDPKVVSERDRKAHQALRQMIQQVWQAFPDA FASE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19115; Mature: 19115
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLIGIPPSREFYLRDRLTVCDRNPATMTDQSSSHATSYEIVCLEHQGSYLYAEVIQTIE CEEECCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH TRQRSWVRPLFLQLTTQSSEPAYPAQGLFSFRLQNCADLVWPSQFFRPAMDDEVLPFLLQ HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH MHTEKPQDQEDPKVVSERDRKAHQALRQMIQQVWQAFPDAFASE HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFLIGIPPSREFYLRDRLTVCDRNPATMTDQSSSHATSYEIVCLEHQGSYLYAEVIQTIE CEEECCCCCCCCHHHCCCCEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH TRQRSWVRPLFLQLTTQSSEPAYPAQGLFSFRLQNCADLVWPSQFFRPAMDDEVLPFLLQ HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH MHTEKPQDQEDPKVVSERDRKAHQALRQMIQQVWQAFPDAFASE HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA